Exudative cloacitis in the kakapo (Strigops habroptilus) potentially linked to Escherichia coli infection

References

• Baker JR. A survey of the causes of ‘wet vent’ in budgerigars. Veterinary Record 121, 448–449, 1987 doi: 10.1136/vr.121.19.448
   PubMed Web of Science ®Google Scholar
• Berthet N, Reinhardt AK, Leclercq I, van Ooyen S, Batejat C, Dickinson P, Stamboliyska R, Old IG, Kong KA, Dacheux L et al. Phi29 polymerase based random amplification of viral RNA as an alternative to random RT–PCR. BMC Molecular Biology 9, 77, 2008 doi: 10.1186/1471-2199-9-77
   PubMed Web of Science ®Google Scholar
• Blomström A–L. Viral metagenomics as an emerging and powerful tool in veterinary medicine. Veterinary Quarterly 31, 107–114, 2011 doi: 10.1080/01652176.2011.604971
   PubMed Web of Science ®Google Scholar
• Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, Madden TL. BLAST+: architecture and applications. BMC Bioinformatics 10, 421, 2009 doi: 10.1186/1471-2105-10-421
   PubMed Web of Science ®Google Scholar
• Chevreux B, Wetter T, Suhai S. Genome sequence assembly using trace signals and additional sequence information. Computer Science and Biology: Proceedings of the German Conference on Bioinformatics (GCB) 99, 45–56, 1999
   Google Scholar
• Crosta L, Gerlach H, Burkle M, Timossi I. Physiology, diagnosis and diseases of the avian reproductive tract. Veterinary Clinics of North America: Exotic Animal Practice 6, 57–83, 2003
   PubMedGoogle Scholar
• Deem SL, Karesh WB, Weisman W. Putting theory into practice: wildlife health in conservation. Conservation Biology 15, 1224–1233, 2001 doi: 10.1046/j.1523-1739.2001.00336.x
   Web of Science ®Google Scholar
• Elliott G, Merton D, Jansen P. Intensive management of a critically endangered species: the kakapo. Biological Conservation 99, 121–133, 2001 doi: 10.1016/S0006-3207(00)00191-9
   Web of Science ®Google Scholar
• Hall RJ, Wang J, Peacey M, Moore NE, McInnes K, Tompkins DM. New alphacoronavirus in Mystacina tuberculata bats, New Zealand. Emerging Infectious Diseases 20, 697–700, 2014
   PubMed Web of Science ®Google Scholar
• Huson DH, Auch AF, Qi J, Schuster SC. MEGAN analysis of metagenomic data. Genome Research 17, 377–386, 2007 doi: 10.1101/gr.5969107
   PubMed Web of Science ®Google Scholar
• *Jakob–Hoff R, Gartrell B. Veterinary care of Kakapo. In: Miller RE, Fowler M (eds). Fowler's Zoo and Wild Animal Medicine Current Therapy, Volume 7. Pp 304–311. Saunders, Philadelphia, USA, 2011
   Google Scholar
• *Jakob–Hoff RM, Potter JS, Shaw SD. Traumatic cloacitis in a kakapo. Strigops habroptilus. Kokako 16, 51–52, 2009
   Google Scholar
• L'Abee–Lund TM, Jorgensen HJ, O'Sullivan K, Bohlin J, Ligard G, Granum PE, Lindback T. The highly virulent 2006 norwegian EHEC O103:H25 outbreak strain is related to the 2011 German O104:H4 outbreak strain. PLoS ONE 7, e31413, 2012 doi: 10.1371/journal.pone.0031413
   Google Scholar
• Liu H, Fu Y, Xie J, Cheng J, Ghabrial SA, Li G, Yi X, Jiang D. Discovery of Novel dsRNA viral sequences by in silico cloning and implications for viral diversity, host range and evolution. PLoS One 7, e42147, 2012 doi: 10.1371/journal.pone.0042147
   Google Scholar
• Merton DV, Clout M. Red data bird: Kakapo (Strigops habroptilus). World Birdwatch. BirdLife International 20, 20–21, 1998
   Google Scholar
• Pesapane R, Ponder M, Alexander KA. Tracking pathogen transmission at the human–wildlife interface: banded mongoose and Escherichia coli. EcoHealth 10, 115–128, 2013 doi: 10.1007/s10393-013-0838-2
   PubMed Web of Science ®Google Scholar
• *Samour J. Avian Medicine. Mosby, London, UK, 2000
   Google Scholar
• Schimmer B, Nygard K, Eriksen HM, Lassen J, Lindstedt BA, Brandal LT, Kapperud G, Aavitsland P. Outbreak of haemolytic uraemic syndrome in Norway caused by stx2–positive Escherichia coli O103:H25 traced to cured mutton sausages. BMC Infectious Diseases 8, 41, 2008 doi: 10.1186/1471-2334-8-41
   PubMed Web of Science ®Google Scholar
• Schmieder R, Edwards R. Quality control and preprocessing of metagenomic datasets. Bioinformatics 27, 863–864, 2011 doi: 10.1093/bioinformatics/btr026
   PubMed Web of Science ®Google Scholar
• Tompkins DM, Dunn AM, Smith MJ, Telfer S. Wildlife diseases: from individuals to ecosystems. Journal of Animal Ecology 80, 19–38, 2011 doi: 10.1111/j.1365-2656.2010.01742.x
   PubMed Web of Science ®Google Scholar
• Waite DW, Deines P, Taylor MW. Gut microbiome of the critically endangered New Zealand parrot, the Kakapo (Strigops habroptilus). PLoS One 7, e35803, 2012 doi: 10.1371/journal.pone.0035803
   PubMed Web of Science ®Google Scholar