Towards High-Resolution Habitat Suitability Modeling of Vulnerable Marine Ecosystems in the Deep-Sea: Resolving Terrain Attribute Dependencies

References

• Albani , M. , Klinkenberg , B. , Andison , D. W. and Kimmins , J. P. 2004 . The choice of window size in approximating topographic surfaces from digital elevation models . International Journal of Geographical Information Science , 18 : 577 – 593 .
   Web of Science ®Google Scholar
• Anderson , J. T. , Van Holliday , D. , Kloser , R. , Reid , D. G. and Simard , Y. 2008 . Acoustic seabed classification: Current practice and future directions . ICES Journal of Marine Science , 65 ( 6 ) : 1004 – 1011 .
   Web of Science ®Google Scholar
• Bryan , T. L. and Metaxas , A. 2007 . Predicting suitable habitat for deep-water gorgonian corals on the Atlantic and Pacific Continental Margins of North America . Marine Ecology Progress Series , 330 : 113 – 126 .
   Web of Science ®Google Scholar
• Clark , M. R. , Tittensor , D. , Rogers , A. D. , Schlachter , T. , Rowden , A. A. , Stocks , K. and Consalvey , M. 2006 . Seamounts, deep-sea corals and fisheries: Vulnerability of deep-sea corals to fishing on seamounts beyond areas of national jurisdiction , Cambridge : UNEP-WCMC .
   Google Scholar
• Davies , A. J. , Wisshak , M. , Orr , J. C. and Murray Roberts , J. 2008 . Predicting suitable habitat for the cold-water coral Lophelia pertusa (Scleractinia) . Deep Sea Research Part I: Oceanographic Research Papers , 55 ( 8 ) : 1048 – 1062 .
   Web of Science ®Google Scholar
• Degraer , S. , Verfaillie , E. , Willems , W. , Adriaens , E. , Vincx , M. and van , V. 2008 . Habitat suitability modelling as a mapping tool for macrobenthic communities: An example from the Belgian part of the North Sea . Continental Shelf Research , 28 ( 3 ) : 369 – 379 . Lancker
   Web of Science ®Google Scholar
• Deng , Y. 2007 . New trends in digital terrain analysis: Landform definition, representation, and classification . Progress in Physical Geography , 31 ( 4 ) : 405 – 419 .
   Web of Science ®Google Scholar
• Deng , Y. , Wilson , J. P. and Bauer , B. O. 2007 . DEM resolution dependencies of terrain attributes across a landscape . International Journal of Geographical Information Science , 21 : 187 – 213 .
   Web of Science ®Google Scholar
• Dolan , M. F. J. , Grehan , A. J. , Guinan , J. C. and Brown , C. 2008 . Modelling the local distribution of cold-water corals in relation to bathymetric variables: Adding spatial context to deep-sea video data . Deep Sea Research Part I: Oceanographic Research Papers , 55 ( 11 ) : 1564 – 1579 .
   Web of Science ®Google Scholar
• Munoz , P , Sayago-Gil , M. , Parra , S. , Serrano , A. , Diaz del Rio , V , Patrocinio , T. , Sacau , M. , Murillo , F. J. , Palomino , D. and Fernandez-Salas , L. M. 2009 . Seabed mapping for selecting cold-water coral protection areas on Hatton Bank, Northeast Atlantic . ICES Journal of Marine Science , 66 ( 9 ) : 2013 – 2025 . Duran
   Web of Science ®Google Scholar
• Elith , J. , Graham , C. H. , Anderson , R. P. , Dudik , M. , Ferrier , S. , Guisan , A. , Hijmans , R. J. , Huettmann , F. , Leathwick , J. R. and Lehmann , A. 2006 . Novel methods improve prediction of species’ distributions from occurrence data . Ecography , 29 ( 2 ) : 129 – 151 .
   Web of Science ®Google Scholar
• Etnoyer , P. and Morgan , L. E. 2007 . Predictive habitat model for deep gorgonians needs better resolution: Comment on Bryan & Metaxas (2007) . Marine Ecology Progress Series , 339 : 311 – 312 .
   Web of Science ®Google Scholar
• Fisher , P. , Wood , J. and Cheng , T. 2004 . “ Where is Helvellyn? Fuzziness of multi-scale landscape morphometry. ” . In Transactions of the Institute of British Geographers 106 – 128 . 29
   Google Scholar
• Gage , J. D. and Bett , B. J. 2005 . “ Deep-sea benthic sampling ” . In Methods for the study of marine benthos, 3rd edition , Edited by: McIntyre , A. D. and Eleftheriou , A. 273 – 325 . Oxford : Blackwell Science .
   Google Scholar
• Gallant , J. C. and Hutchinson , M. F. 1996 . “ Towards an understanding of landscape scale and structure ” . In Proceedings, Third International Conference/Workshop on Integrating GIS and Environmental Modeling , Santa Fe , NM : National Center for Geographic Information and Analysis .
   Google Scholar
• Galparsoro , I. , Borja , Bald , J. , Liria , P. and Chust , G. 2009 . Predicting suitable habitat for the European lobster (Homarus gammarus), on the Basque continental shelf (Bay of Biscay), using ecological-niche factor analysis . Ecological Modelling , 220 ( 4 ) : 556 – 567 .
   Web of Science ®Google Scholar
• GEBCO . 2009 . General bathymetric chart of the oceans (GEBCO) . http://www.bodc.ac.uk/data/online_delivery/gebco/
   Google Scholar
• GOTECH . 2002 . Report of the survey in zone 3 of the Irish national seabed survey: Volume 1—describing the results and the methods used. The Geological Survey of Ireland .
   Google Scholar
• Grehan , A. , Wilson , M. , Guinan , J. , Ullgren , J. , Riordan , J. , Rooney , S. , Sacchetti , F. and Shipboard , Party . 2005 . Ocean habitat mapping in the deep-waters off the west coast of Ireland using a remotely operated vehicle. CE0505 Cruise Report. Department of Earth and Ocean Sciences, NUI, Galway .
   Google Scholar
• Grehan , A. , Guillaumont , B. , Lafargue , P. , Renstorf , A. and Guihen , D. 2009 . A multi-disciplinary investigation of ecosystem hotspots and their importance as fish habitat along the Irish and Biscay continental margins. CE0908 Cruise Report. Department of Earth and Ocean Sciences, NUI, Galway .
   Google Scholar
• Grehan , A. J. , van der Hove , S. , Armstrong , C. W. , Long , R. , van Rensburg , T. , Gunn , V. , Mikkelsen , E. , de Mol , B. and Hain , S. 2009 . HERMES: Promoting ecosystem-based management and the sustainable use and governance of deep-water resources . Oceanography , 22 : 154 – 165 .
   Web of Science ®Google Scholar
• Guinan , J. , Brown , C. , Dolan , M. F. J. and Grehan , A. J. 2009a . Ecological niche modelling of the distribution of cold-water coral habitat using underwater remote sensing data . Ecological Informatics , 4 ( 2 ) : 83 – 92 .
   Web of Science ®Google Scholar
• Guinan , J. , Grehan , A. , Wilson , M. F. J. and Brown , C. 2009b . Quantifying relationships between video observations of cold-water coral and seafloor terrain in Rockall Trough, west of Ireland . Marine Ecology Progress Series , 375 : 125 – 138 .
   Web of Science ®Google Scholar
• Guinotte , J. M. , Davies , A. J. and Ardron , J. 2009 . Global habitat suitability for reef forming coldwater corals , Report to Pew Charitable Trusts .
   Google Scholar
• Guisan , A. , Graham , C. H. , Elith , J. and Huettmann , F. 2007 . Sensitivity of predictive species distribution models to change in grain size . Diversity and Distributions , 13 ( 3 ) : 332 – 340 .
   Web of Science ®Google Scholar
• Guisan , A. and Thuiller , W. 2005 . Predicting species distribution: Offering more than simple habitat models . Ecology Letters , 8 ( 9 ) : 993 – 1009 .
   PubMed Web of Science ®Google Scholar
• Hirzel , A. H. , Hausser , J. , Chessel , D. and Perrin , N. 2002 . Ecological-niche factor analysis: How to compute habitat-suitability maps without absence data? . Ecology , 83 : 2027 – 2036 .
   Web of Science ®Google Scholar
• Holmes , K. W. , van Niel , K. P. , Radford , B. , Kendrick , G. A. and Grove , S. L. 2008 . Modelling distribution of marine benthos from hydroacoustics and underwater video . Continental Shelf Research , 28 ( 14 ) : 1800 – 1810 .
   Web of Science ®Google Scholar
• Jiménez-Valverde , A. and Lobo , J. M. 2007 . Threshold criteria for conversion of probability of species presence to either-or presence-absence . Acta Oecologica , 31 ( 3 ) : 361 – 369 .
   Web of Science ®Google Scholar
• Kendall , M. S. and Miller , T. 2008 . The influence of thematic and spatial resolution on maps of a coral reef ecosystem . Marine Geodesy , 31 ( 2 ) : 75 – 102 .
   Web of Science ®Google Scholar
• Kenny , A. J. , Cato , I. , Desprez , M. , Fader , G. , Schuttenhelm , R. T. E. and Side , J. 2003 . An overview of seabed-mapping technologies in the context of marine habitat classification . ICES Journal of Marine Science , 60 ( 2 ) : 411 – 418 .
   Web of Science ®Google Scholar
• Kenyon , N. H. , Akhmetzhanov , A. M. , Wheeler , A. J. , van Weering , T. C. E. , De Haas , H. and Ivanov , M. K. 2003 . Giant carbonate mud mounds in the southern Rockall Trough . Marine Geology , 195 : 5 – 30 .
   Web of Science ®Google Scholar
• Kienzle , S. 2004 . The effect of DEM raster resolution on first order, second order and compound terrain derivatives . Transactions in GIS , 8 ( 1 ) : 83 – 111 .
   Google Scholar
• Kostylev , V. E. , Todd , B. J. , Fader , B. J. , Courtney , R. C. , Cameron , G. D. M. and Pickrill , R. A. 2001 . Benthic habitat mapping on the Scotian Shelf based on multibeam bathymetry, surficial geology and sea floor photographs . Marine Ecology Progress Series , 219 : 121 – 137 .
   Web of Science ®Google Scholar
• Liu , C. , Berry , P. M. , Dawson , T. P. and Pearson , R. G. 2005 . Selecting thresholds of occurrence in the prediction of species distributions . Ecography , 28 : 385 – 393 .
   Web of Science ®Google Scholar
• Lundblad , E. R. , Wright , D. J. , Miller , J. R. , Larkin , E. M. , Rinehart , R. , Naar , D. F. , Donahue , B. T. , Anderson , S. M. and Battista , T. 2006 . A benthic terrain classification scheme for American Samoa . Marine Geodesy , 29 ( 2 ) : 89 – 111 .
   Google Scholar
• MacKey , B. G. and Lindenmayer , D. B. 2001 . Towards a hierarchical framework for modelling the spatial distribution of animals . Journal of Biogeography , 28 ( 9 ) : 1147 – 1166 .
   Web of Science ®Google Scholar
• Marks , K. and Smith , W. 2006 . An evaluation of publicly available global bathymetry grids . Marine Geophysical Researches , 27 ( 1 ) : 19 – 34 .
   Web of Science ®Google Scholar
• Mienis , F. , van Weering , T. , de Haas , H. , de Stigter , H. , Huvenne , V. and Wheeler , A. 2006 . Carbonate mound development at the SW Rockall Trough margin based on high resolution TOBI and seismic recording . Marine Geology , 233 ( 1–4 ) : 1 – 19 .
   Web of Science ®Google Scholar
• Olu-Le Roy , Caprais , J. C. , Crassous , P. , Dejonghe , E. , Eardley , D. , Freiwald , A. , Galeron , J. , Grehan , A. , Henriet , J. P. , Huvenne , V. , Lorance , P. , Noel , P. , Opderbecke , J. , Pitout , C. , Sibuet , M. , Unnithan , V. , Vacelet , J. , van Weering , T. , Wheeler , A. and Zibrowius , H. 2002 . Caracole Cruise, N/O Atalante and ROV Victor, 1+2 Ifremer , Brest
   Google Scholar
• Pearson , R. G. and Dawson , T. P. 2003 . Predicting the impacts of climate change on the distribution of species: Are bioclimate envelope models useful? . Global Ecology & Biogeography , 12 ( 5 ) : 361 – 371 .
   Web of Science ®Google Scholar
• Phillips , S. J. , Anderson , R. P. and Schapire , R. E. 2006 . Maximum entropy modeling of species geographic distributions . Ecological Modelling , 190 ( 3–4 ) : 231 – 259 .
   Web of Science ®Google Scholar
• Roberts , J. M. , Wheeler , A. J. , Freiwald , A. and Cairns , S. 2009 . Cold-water corals—the biology and geology of deep-sea coral habitats. , New York : Cambridge University Press .
   Google Scholar
• Schmidt , J. and Andrew , R. 2005 . Multi-scale landform characterization . Area , 37 ( 3 ) : 341 – 350 .
   Web of Science ®Google Scholar
• Seo , C. , Thorne , J. H. , Hannah , L. and Thuiller , W. 2009 . Scale effects in species distribution models: Implications for conservation planning under climate change . Biology Letters , 5 : 39 – 43 .
   PubMed Web of Science ®Google Scholar
• Sørensen , R. and Seibert , J. 2007 . Effects of DEM resolution on the calculation of topographical indices: TWI and its components . Journal of Hydrology , 347 ( 1–2 ) : 79 – 89 .
   Web of Science ®Google Scholar
• Tittensor , D. P. , Baco , A. R. , Brewin , P. E. , Clark , M. R. , Consalvey , C. M. , Hall-Spencer , J. , Rowden , A. A. , Schlachter , T. , Stocks , K. I. and Rogers , A. D. 2009 . Predicting global habitat suitability for stony corals on seamounts . Journal of Biogeography , 36 ( 6 ) : 1111 – 1128 .
   Web of Science ®Google Scholar
• UNGA . 2006 . Sustainable fisheries, including through the 1995 agreement for the implementation of the provisions of the United Nations Convention on the Law of the Sea of 10 December 1982 relating to the conservation and management of straddling fish stocks and highly migratory fish stocks, and related instruments. Ref. A/RES/61/105, 21 New York , , United Nations
   Google Scholar
• Verfaillie , E. , du Four , I. , van Meirvenne , M. and van Lancker , V. 2008 . Geostatistical modeling of sedimentological parameters using multi-scale terrain variables: application along the Belgian Part of the North Sea . International Journal of Geographical Information Science , 23 ( 2 ) : 135 – 150 .
   Web of Science ®Google Scholar
• Weiss , A. D. 2001 . Topographic position and landforms analysis , San Diego , CA : Poster presentation, ESRI User Conference .
   Google Scholar
• Wheeler , A. , Beyer , A. , Freiwald , A. , Huvenne , V. , Kozachenko , M. , Olu-Le , K. and Opderbecke Roys , J. 2007 . Morphology and environment of cold-water coral carbonate mounds on the NW European margin . International Journal of Earth Sciences , 96 ( 1 ) : 37 – 56 .
   Web of Science ®Google Scholar
• Wiens , J. A. 2002 . “ Predicting species occurrences: Progress, problems, and prospects ” . In Predicting species occurrences: Issues of accuracy and scale , Edited by: Scott , J. M. , Heglund , P. J. , Samson , F. , Haufler , J. , Morrison , M. , Raphael , M. and Wall , B. 739 – 749 . Covelo , CA : Island Press .
   Google Scholar
• Wilson , M. F. J. , O’Connell , B. , Brown , C. , Guinan , J. C. and Grehan , A. J. 2007 . Multiscale terrain analysis of multibeam bathymetry data for habitat mapping on the continental slope . Marine Geodesy , 30 : 3 – 35 .
   Web of Science ®Google Scholar
• Wolock , D. M. and McCabe , G. J. 2000 . Differences in topographic characteristics computed from 100- and 1000-m resolution digital elevation model data . Hydrological Processes , 14 ( 6 ) : 987 – 1002 .
   Web of Science ®Google Scholar
• Wood , J. 1996 . The geomorphological characterisation of digital elevation models , Doctoral Thesis, University of Leicester . http://www.soi.city.ac.uk/~jwo/phd
   Google Scholar
• Woodby , D. , Carlile , D. and Hulbert , L. 2009 . Predictive modelling of coral distribution in the Central Aleutian Islands, USA . Marine Ecology Progress Series , 397 : 227 – 240 .
   Web of Science ®Google Scholar