235
Views
23
CrossRef citations to date
0
Altmetric
Original Articles

Fungal Diversity of Shallow Aquifers in Southeastern Australia

, , , &
Pages 352-361 | Received 01 Dec 2010, Accepted 26 Jan 2011, Published online: 08 Feb 2012

REFERENCES

  • Ackworth , RI. 2001 . Physical and chemical properties of a DNAPL contaminated zone in a sand aquifer . Q J Eng Geol Hydroge , 34 : 85 – 98 .
  • Alexopoulos , CJ. 1962 . “ Introductory Mycology ” . New York , NY : John Wiley & Sons Inc .
  • Alton , LS. 1995 . Survival of Penicillium species in marine and river water contaminated with diesel, oil, nitrogen and phosphorous compounds . Arch Environ Contam Toxicol , 29 ( 1 ) : 39 – 44 .
  • Anderson , I C and Cairney , J WG . 2004 . Diversity and ecology of soil fungal communities: increased understanding through application of molecular techniques . Environ Microbiol , 6 : 769 – 779 .
  • Baldy , V , Gobert , V , Guerold , F , Chauvet , E , Lambrigot , D and Charcosset , J-Y . 2007 . Leaf litter breakdown budgets in streams of various trophic status:effects of dissolved inorganic nutrients on microorganisms and invertebrates . Freshwat Biol , 52 : 1322 – 1335 .
  • Bärlocher , F and Murdoch , J H . 1989 . Hyporheic biofilms—a potential food source for hyporheic animals . Hydrobiologia , 184 : 61 – 67 .
  • Bennet , PC. 1991 . Quartz dissolution in organic-rich aqueous systems . Geochim Cosmochim Acta , 55 : 1781 – 1797 .
  • Brad , T , Braster , M , van Breukelen , B , van Straalen , N and Röling , W F . 2008 . Eukaryotic diversity in an anaerobic aquifer polluted with landfill leachate . Appl Environ Microbiol , 74 ( 13 ) : 3959 – 3968 .
  • Chapelle , FH. 1993 . “ Microorganisms present in the groundwater environment. In: Chapelle FH, editor. Groundwater Microbiology and Geochemistry ” . New York , NY : John Wiley & Sons Inc .
  • CSIRO . 2002 . “ The Natural Farming Sequence ” . Tarwyn Park Upper Bylong Valley : NSW CSIRO Land and Water .
  • de Hoog , G S , Guarro , J , Gene , J and Figueiras , M J . 2000 . “ Atlas of Clinical Fungi ” . Utrecht , , The Netherlands : Centraalbureau voor Schimmelcutures .
  • Detmers , J H and Strauss , H . 2004 . FISH shows that Disulfotomaculum spp. are the dominating sulfate-reducing bacteria in a pristine aquifer . Microb Ecol , 47 : 236 – 242 .
  • Dojka , M AP , Hugenholtz , P , Haack , S K and Pace , N R . 1998 . Microbial diversity in an hydrocarbon and chlorinated solvent contaminated aquifers undergoing intrinsic bioremediation . Appl. Environ Microbiol , 64 : 3869 – 3877 .
  • Dynoswka , M , Biedunkiewicz-Ziomek , A and Kisicka , I . 2005 . Enzymatic activity of yeast-like fungi isolated from different types of waters . Ecohydrol Hydrobiol , 5 ( 2 ) : 147 – 153 .
  • Ekendahl , S , O’Neill , A H , Thomsson , E and Pedersen , K . 2003 . Characterisation of Yeasts isolated from deep igneous rock aquifers of the Fennoscadian Shield . Microb. Ecol. , 46 : 416 – 428 .
  • Ellis , D , Davis , S , Alexiou , H , Handke , R and Bartley , R . 2007 . “ Descriptions of Medical Fungi ” . Adelaide : Authors .
  • Ellouze , M , Aloui , F and Sayadi , S . 2008 . Detoxification of Tunisian landfill leachates by selected fungi . J Hazard Mater , 150 ( 3 ) : 642 – 648 .
  • Feldmann , M. 1997 . Geomicrobial processes in the subsurface:A tribute to Johannes Neher's work . FEMS Microbiol Rev , 20 : 181 – 189 .
  • Fuller , M and Jaworski , J . 1986 . “ Zoosporic Fungi in Teaching and Research ” . 9 – 32 . Athens , Georgia : Southeastern Publishing .
  • Gillings , M R , Holley , M P and Selleck , M . 2007 . Molecular identification of species comprising an unusual biofilm from a groundwater treatment plant . Biofilms , 3 : 19 – 24 .
  • Gleeson , D B , Melville , K , McDermott , F , Clipson , N and Gadd , G . 2010 . Molecular characterisation of fungal communities in sandstone . Geomicrobiol J , 27 : 559 – 571 .
  • Goh , T and Hyde , K . 1996 . Biodiversity of freshwater fungi . J Ind Microbiol Biotechnol , 17 : 328 – 345 .
  • Gonout , A M . 1994 . “ Microbial ecology of groundwaters ” . In Groundwater Ecology , 189 – 215 . San Diego , California : Academic Press .
  • Gottlich , E , Van der Lubbe , W , Lange , B , Fiedler , S , Melchert , I , Reifenrath , M , Flemming , H C and de Hoog , S . 2002 . Fungal flora in groundwater-derived public drinking water . Int J Hyg Environ Health , 205 : 269 – 279 .
  • Griebler , C and Lueders , T . 2009 . Microbial diversity in groundwater ecosystems . Freshwat Biol , 54 : 649 – 677 .
  • Haack , S K and Bekins , B A . 2000 . Microbial populations in contaminant plumes . Hydrogeol J , 8 : 63 – 76 .
  • Hageskal , G , Gaustad , P , Heier , B T and Skaar , I . 2007 . Occurrence of moulds in drinking water . J Appl Microbiol , 102 : 774 – 780 .
  • Hageskal , G , Knutsen , A K , Gaustad , P , de Hoog , G S and Skaar , I . 2006 . Diversity and significance of mould species in Norwegian drinking water . Appl Environ Microbiol , 72 : 7586 – 7593 .
  • Hageskal , G , Lima , N and Skaar , I . 2009 . The study of fungi in drinking water . Mycol Res , 113 : 165 – 172 .
  • Hagler , A N and Hearn , D G . 1987 . “ Ecology of aquatic yeasts ” . In The Yeasts , Edited by: Rose , H A and Harrison , J S . Vol. 2 , London : Academic Press .
  • Hirsch , P and Rades-Rohkohl , E . 1992 . “ The natural microflora of the Segeberger Forst aquifer system ” . In Progress in Hydrogeochemistry , Edited by: Mathess , G , Frimmel , F H , Hirsch , P , Schulz , H D and Usdowski , E . 390 – 412 . Berlin : Springer Verlag .
  • Horton , TR. 2002 . Molecular approaches to ectomycorrhizal diversity studies:variation in ITS at a local scale . Plant Soil , 244 : 29 – 39 .
  • Hughes , K A , Bridge , P and Clark , M S . 2007 . Tolerance of Antarctic soil fungi to hydrocarbons . Sci Total Environ , 372 : 539 – 548 .
  • Humphreys , WF. 2006 . Aquifers: the ultimate groundwater-dependent ecosystems . Aust J Bot , 54 : 115 – 132 .
  • Hutchens , E , Gleeson , D B , McDermott , F , Miranda-Casol Luengo , R and Clipson , N . 2010 . Meter-scale diversity of microbial communities on a weathered pegmatite granite outcrop in the Wicklow Mountains, Ireland; Evidence for mineral induced selection? . Geomicrobiol J , 27 : 1 – 4 .
  • Ingold , C. 1975 . “ An Illustrated Guide to Aquatic and Water-borne Hyphomycetes ” . Ambleside , , UK : Freshwater Biological Association, Scientific Publication No 30 .
  • Jankowski , J and Beck , P . 2000 . Aquifer heterogeneity: hydrogeological and hydrochemical properties of the Botany Sands aquifer and their impact on contaminant transport . Aust J Earth Sci , 47 ( 1 ) : 45 – 64 .
  • Jongmans , A G , van Breemen , N , Lunstrom , U , van Hees , P AW , Finlay , R D , Srinivasan , M , Unestam , T , Giesler , R , Melkerud , P A and Olsson , M . 1997 . Rockeating fungi . Nature , 389 : 682 – 683 .
  • Kapoor , A , Viraraghavan , T and Cullimore , D R . 1999 . Removal of heavy metals using the fungus Aspergillus niger . Bioresour Technol , 70 : 95 – 104 .
  • Kim , J-D and Lee , C-G . 2007 . Microbial degradation of polycyclic aromatic hydrocarbons in soil by bacterium-fungus co-cultures . Biotechnol Bioprocess Eng , 12 : 410 – 416 .
  • Kolbel-Boelke , J and Nehrkorn , A . 1992 . “ Heterotrophic bacterial communities in the Bocholt aquifer system ” . In Progress in Hydrogeochemistry , Edited by: Mathess , G , Frimmel , F H , Hirsch , P , Schulz , H D and Usdowski , E . 378 – 390 . Berlin : Springer Verlag .
  • Krauss , G , Sridhar , K R and Bärlocher , F . 2005 . Aquatic hyphomycetes and leaf decomposition in contaminated groundwater wells in central Germany . Arch Hydrobiol , 162 : 417 – 429 .
  • Krauss , G , Sridhar , K R , Jung , K , Wennrich , R , Ehrman , J and Bärlocher , F . 2003 . Aquatic hyphomycetes in polluted groundwater habitats of Central Germany . Microb Ecol , 45 : 329 – 339 .
  • Krumholz , LR. 2000 . Microbial communities in the deep subsurface . Hydrogeol J , 8 : 4 – 10 .
  • Libkind , D , Brizzio , S , Ruffini , A , Gadanho , M , van Broock , M and Sampaio , J P . 2003 . Molecular characterisation of carotenogenic yeasts from aquatic environments in Patagonia . Antonie Van Leeuwen , 84 : 313 – 322 .
  • Ludvigsen , L , Albrechtsen , H J , Ringelberg , D B , Ekelund , F and Christensen , T H . 1999 . Distribution and composition of microbial populations in a landfill leachate contaminated aquifer (Grinsted, Denmark) . Microb Ecol , 37 : 197 – 207 .
  • Merritt , R W and Cummins , K W . 1996 . “ An introduction to aquatic insects of North America ” . In , 3rd ed , Dubuque , , IA : Kendall-Hunt Publishing Co .
  • Nagahama , T. 2006 . “ Yeast biodiversity in freshwater, marine and deep-sea environments ” . In Biodiversity and Ecophysiology of Yeasts , Edited by: Gabor , P and Rosa , C . 241 – 262 . Heidelberg : Springer-Verlag .
  • Notenboom , J , Plenet , S and Turquin , M . 1994 . “ Groundwater contamination and its impact on groundwater animals and ecosystems ” . In Groundwater Ecology , Edited by: Gilbert , J and Danielopol , DL . 477 – 504 . San Diego , California : Academic Press .
  • O’Connell , S P , Lehman , R M , Snoeyenbos-West , O , Winston , V D , Cummings , D E , Watwood , M F and Colwell , F S . 2003 . Detection of Euryachaeota and Crenarchaeota in an oxic basalt aquifer . FEMS Microbiol Ecol , 44 : 165 – 173 .
  • Pedersen , K , Arlinger , J , Hallbeck , L and Petterson , C . 1996 . Diversity and distribution of subterranean bacteria in groundwater at Oklo in Gabon, Africa, as determined by 16S rRNA gene sequencing . Mol Ecol , 5 : 427 – 436 .
  • Pereira , V J , Basilio , M C , Fernandes , D , Domingues , M , Paiva , J M , Benoliel , M J , Crespo , M T and San Romao , M V . 2009 . Occurrence of filamentous fungi and yeasts in three different drinking water sources . Water Res , 43 : 3813 – 3819 .
  • Pielou , EC. 1966 . The measurement of diversity in different types of biological collections . J Theor Biol , 13 : 131 – 144 .
  • Prenafeta-Boldu , F X , Kuhn , A , Luykx , DMAM , Anke , H , van Groenestijn , J W and de Bonte , M . 2001 . Isolation and characterisation of fungi growing on volatile aromatic hydrocarbons as their sole carbon and energy source . Mycol Res , 105 ( 4 ) : 477 – 484 .
  • Prigione , V , Zerlottin , M , Refosco , D , Tigini , V , Anastasi , A and Varese , G . 2009 . Chromium removal from a real tanning effluent by autochthonous and allochthonous fungi . Bioresour Technol , 100 : 2770 – 2776 .
  • Reddy , YR. 2002 . Why neglect groundwater biology? . Curr Sci , 83 ( 8 ) : 931 – 932 .
  • Reed , D A , Toze , S and Chang , B . 2008 . Spatial and temporal changes in sulphate-reducing groundwater bacterial community structure in response to managed aquifer recharge . Water Sci Technol , 57 : 789 – 795 .
  • Shearer , C , Descals , E , Kohlmeyer , B , Kohlmeyer , J , Marvanova , L , Padgett , D , Porter , D , Raja , H , Schmidt , J , Thorton , H and Voglmayer , H . 2007 . Fungal biodiversity in aquatic habitats . Biodivers Conserv , 16 : 49 – 67 .
  • Smirnov , NN. 1961 . Food cycles in sphagnous bogs . Hydrobiologia , 17 : 175 – 182 .
  • Sridhar , K R , Bärlocher , F , Krauss , G J and Krauss , G . 2005 . Response of aquatic hyphomycete communities to changes in heavy metal exposure . Int Rev Hydrobiol , 90 ( 1 ) : 21 – 32 .
  • Sridhar , K R , Krauss , G , Bärlocher , F , Raviraja , N S , Wenrich , R , Baumbach , R and Krauss , G J . 2001 . Decomposition of alder leaves in two heavy metal polluted streams in Central Germany . Aquat Microb Ecol , 26 : 73 – 80 .
  • Tang , K W , Hutalle , K M and Grossart , H P . 2006 . Microbial abundance, composition and enzymatic acyivity during decomposition of copepod carcasses . Aquat Microb Ecol , 45 : 219 – 227 .
  • Wurzbacher , C M , Bärlocher , F and Grossart , H P . 2010 . Fungi in lake ecosystems . Aquat Microb Ecol , 59 : 125 – 149 .
  • Zacheus , O and Martikainen , P J . 1995 . Occurrance of heterotrophioc bacteria and fungi in cold and hot water distribution systems using water of different quality . Can J Microbiol , 41 : 1088 – 1094 .
  • Zarda , B , Mattison , G , Hess , A , Hahn , D , Hoehener , P and Zeyer , J . 1998 . Analysis of bacterial and protozoan communities in an aquifer contaminated with monoaromatic hydrocarbons . FEMS Microbiol Ecol , 27 : 141 – 152 .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.