Role of Chemosynthetic Thermophilic Communities on the Biogeochemical Cycles of Minerals in the Orca Seamount Area, Antarctica

References

• Allan RN, Lebbe L, Heyrman J, De Vos P, Buchanan CJ, Logan NA. 2005. Brevibacillus levickii sp. nov. and Aneurinibacillus terranovensis sp. nov., two novel thermoacidophiles isolated from geothermal soils of northern Victoria Land, Antarctica. Int J Syst Evol Microbiol 55(3):1039–1050.
   PubMed Web of Science ®Google Scholar
• Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25(17):3389–3402.
   PubMed Web of Science ®Google Scholar
• Amenabar MJ, Boyd ES. 2018. Mechanisms of mineral substrate acquisition in a thermoacidophile. Appl Environ Microbiol 84(12):e00334.
   PubMed Web of Science ®Google Scholar
• Amenabar MJ, Boyd ES. 2019. A review of the mechanisms of mineral-based metabolism in early Earth analog rock-hosted hydrothermal ecosystems. World J Microbiol Biotechnol 35(2):29.
   PubMed Web of Science ®Google Scholar
• Amenabar MJ, Colman DR, Poudel S, Roden EE, Boyd ES. 2018. Electron acceptor availability alters carbon and energy metabolism in a thermoacidophile. Environ Microbiol 20(7):2523–2537.
   PubMed Web of Science ®Google Scholar
• Amenabar MJ, Flores PA, Pugin B, Boehmwald FA, Blamey JM. 2013. Archaeal diversity from hydrothermal systems of Deception Island. Polar Biol 36(3):373–380.
   Web of Science ®Google Scholar
• Amenabar MJ, Shock EL, Roden EE, Peters JW, Boyd ES. 2017. Microbial substrate preference dictated by energy demand, not supply. Nat Geosci 10(8):577–581.
   PubMed Web of Science ®Google Scholar
• Amils R, González-Toril E, Gómez F, Fernández-Remolar D, Rodríguez N, Malki M, Zuluaga J, Aguilera A, Amaral-Zettler L. 2004. Importance of chemolithotrophy for early life on earth: the Tinto River (Iberian Pyritic Belt) case. In: Seckbach J, editor. Origins Cellular Origin, Life in Extreme Habitats and Astrobiology. Dordrecht, The Netherlands: Springer, p463–480.
   Google Scholar
• Anadón R, Estrada M. 2002. The FRUELA cruises: a carbon flux study in productive areas of the Antarctic Peninsula (December 1995–February 1996). Deep Sea Res Part II 49(4–5):567–583.
   Web of Science ®Google Scholar
• Barbier G, Wery N. 2015. Caloranaerobacter. In: Bergey’s Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Inc., in association with Bergey's Manual Trust, p1–5.
   Google Scholar
• Barker D, Austin J, Jr. 1994. Crustal diapirism in Bransfield Strait, West Antarctica: evidence for distributed extension in marginal-basin formation. Geol 22(7):657–660.
   Web of Science ®Google Scholar
• Boyd ES, Jackson RA, Encarnacion G, Zahn JA, Beard T, Leavitt WD, Pi Y, Zhang CL, Pearson A, Geesey GG. 2007. Isolation, characterization, and ecology of sulfur-respiring crenarchaea inhabiting acid-sulfate-chloride-containing geothermal springs in yellowstone national park. Appl Environ Microbiol 73(20):6669–6677.
   PubMed Web of Science ®Google Scholar
• Buick R. 2008. When did oxygenic photosynthesis evolve? Phil Trans R Soc B 363(1504):2731–2743.
   PubMed Web of Science ®Google Scholar
• Dick GJ, Anantharaman K, Baker BJ, Li M, Reed DC, Sheik CS. 2013. The microbiology of deep-sea hydrothermal vent plumes: ecological and biogeographic linkages to seafloor and water column habitats. Front Microbiol 4:124.
   PubMed Web of Science ®Google Scholar
• Dinsdale AE, Halket G, Coorevits A, Van Landschoot A, Busse H-J, De Vos P, Logan NA. 2011. Emended descriptions of Geobacillus thermoleovorans and Geobacillus thermocatenulatus. Int J Syst Evol Microbiol 61(8):1802–1810.
   PubMed Web of Science ®Google Scholar
• Djokic T, Van Kranendonk MJ, Campbell KA, Walter MR, Ward CR. 2017. Earliest signs of life on land preserved in ca. 3.5 Ga hot spring deposits. Nat Commun 8(1):15263.
   PubMed Web of Science ®Google Scholar
• Fabrés J, Calafat A, Canals M, Bárcena MA, Flores JA. 2000. Bransfield Basin fine-grained sediments: late-Holocene sedimentary processes and Antarctic oceanographic conditions. The Holocene 10(6):703–718.
   Web of Science ®Google Scholar
• Flores PA, Amenábar MJ, Blamey JM. 2013. Hot Environments from Antarctica: Source of Thermophiles and Hyperthermophiles, with Potential Biotechnological Applications. In: Satyanarayana T, Littlechild J, Kawarabayasi Y, editors. Thermophilic Microbes in Environmental and Industrial Biotechnology. New York, USA: Springer, p99–118.
   Google Scholar
• Fogo JK, Popowsky M. 1949. Spectrophotometric determination of hydrogen sulfide - methylene blue method. Anal Chem 21(6):732–734.
   Web of Science ®Google Scholar
• Galindo-Zaldı́var J, Gamboa L, Maldonado A, Nakao S, Bochu Y. 2004. Tectonic development of the Bransfield Basin and its prolongation to the South Scotia Ridge, northern Antarctic Peninsula. Mar Geol 206(1–4):267–282.
   Web of Science ®Google Scholar
• Garcı́a MA, Castro CG, Rı́os AF, Doval MD, Rosón G, Gomis D, López O, 2002. Water masses and distribution of physico-chemical properties in the Western Bransfield Strait and Gerlache Strait during Austral summer 1995/96. Deep Sea Res Part II 49(4–5):585–602.
   Web of Science ®Google Scholar
• Garrison TS. 2012. Oceanography: An Invitation to Marine Science. Boston, MA: Cengage Learning.
   Google Scholar
• Hatzky J. 2005. The Orca Seamount Region, Antarctica. In: Wille PW, editor. Sound Images of the Ocean in Research and Monitoring. Berlin, Germany; New York, NY: Springer-Verlag.
   Google Scholar
• Ingram RL. 1971. Sieve analysis. In: Carver RE, editor. Procedures in Sedimentary Petrology. New York, USA: Wiley Interscience, p49–67.
   Google Scholar
• Jiang L, Xu H, Zeng X, Wu X, Long M, Shao Z. 2015. Thermophilic hydrogen-producing bacteria inhabiting deep-sea hydrothermal environments represented by Caloranaerobacter. Res Microbiol 166(9):677–687.
   PubMed Web of Science ®Google Scholar
• Jørgensen BB, Boetius A. 2007. Feast and famine-microbial life in the deep-sea bed. Nat Rev Microbiol 5(10):770–781.
   PubMed Web of Science ®Google Scholar
• Kanao M. 2014. Seismicity in the Antarctic continent and surrounding ocean. OJER 3(1):5–14.
   Google Scholar
• Le Bas M, Streckeisen AL. 1991. The IUGS systematics of igneous rocks. J Geol Soc London 148(5):825–833.
   Web of Science ®Google Scholar
• Manachini PL, Fortina MG, Parini C, Craveri R. 1985. Bacillus thermoruber sp. nov., nom. rev., a red-pigmented thermophilic bacterium. Int J Syst Evol Micr 35(4):493–496.
   Google Scholar
• Masqué P, Isla E, Sanchez-Cabeza JA, Palanques A, Bruach JM, Puig P, Guillén J. 2002. Sediment accumulation rates and carbon fluxes to bottom sediments at the Western Bransfield Strait (Antarctica). Deep Sea Res Part II 49(4–5):921–933.
   Web of Science ®Google Scholar
• Monsalves MT, Ollivet-Besson GP, Amenabar MJ, Blamey JM. 2020. Isolation of a Psychrotolerant and UV-C-Resistant Bacterium from Elephant Island, Antarctica with a highly thermoactive and thermostable catalase. Microorganisms 8(1):95.
   PubMed Web of Science ®Google Scholar
• Pedrera A, Ruiz-Constán A, Heredia N, Galindo-Zaldívar J, Bohoyo F, Marín-Lechado C, Ruano P, Somoza L. 2012. The fracture system and the melt emplacement beneath the Deception Island active volcano, South Shetland Islands, Antarctica. Antarctic Sci 24(2):173–182.
   Google Scholar
• Petersen S, Herzig PM, Schwarz-Schampera U, Hannington MD, Jonasson IR. 2004. Hydrothermal precipitates associated with bimodal volcanism in the Central Bransfield Strait, Antarctica. Mineralium Deposita 39(3):358–379.
   Web of Science ®Google Scholar
• Price RE, Giovannelli D. 2017. A review of the geochemistry and microbiology of marine shallow-water hydrothermal vents. In: Reference Module in Earth Systems and Environmental Sciences. Berlin, Germany: Elsevier.
   Google Scholar
• Rey J, Somoza L, Martínez-Frías J. 1995. Tectonic, volcanic, and hydrothermal event sequence on Deception Island (Antarctica). Geo-Mar Lett 15(1):1–8.
   Web of Science ®Google Scholar
• Rickard D. 1997. Kinetics of pyrite formation by the H2S oxidation of iron (II) monosulfide in aqueous solutions between 25 and 125 degrees C: the rate equation. Geochim Cosmochim Ac 61(1):115–134.
   Web of Science ®Google Scholar
• Rickard D, Luther GW, 3rd. 2007. Chemistry of iron sulfides. Chem Rev 107(2):514–562.
   PubMed Web of Science ®Google Scholar
• Rodrigo C, Blamey J, Huhn O, Provost C. 2018. Is there an active hydrothermal flux from the Orca seamount in the Bransfield Strait. Andgeo 45(3):344.
   Web of Science ®Google Scholar
• Rothschild LJ, Mancinelli RL. 2001. Life in extreme environments. Nature 409(6823):1092–1101.
   PubMed Web of Science ®Google Scholar
• Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4(4):406–425.
   PubMed Web of Science ®Google Scholar
• Shepard FP. 1954. Nomenclature based on sand-silt-clay ratios. J Sediment Res 24(3):151–158.
   Google Scholar
• Slobodkin A. 2015. Tepidibacter. Bergey’s Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Inc., in association with Bergey's Manual Trust, p1–4.
   Google Scholar
• Smith CG, Marot M, Ellis AM, Wheaton CJ, Bernier JC, Adams CS. 2015. Sedimentological and Radiochemical Characteristics of Marsh Deposits from Assateague Island and the Adjacent Vicinity, Maryland and Virginia, Following Hurricane Sandy. Washington, DC: US Department of the Interior, US Geological Survey.
   Google Scholar
• Solari M, Hervé F, Martinod J, Le Roux J, Ramírez L, Palacios C. 2008. Geotectonic evolution of the Bransfield Basin, Antarctic Peninsula: insights from analogue models. Antarct Sci 20(2):185–196.
   Web of Science ®Google Scholar
• Somoza L, Martı́nez-Frı́as J, Smellie JL, Rey J, Maestro A, 2004. Evidence for hydrothermal venting and sediment volcanism discharged after recent short-lived volcanic eruptions at Deception Island, Bransfield Strait, Antarctica. Mar Geol 203(1–2):119–140.
   Web of Science ®Google Scholar
• Stackebrandt E, Ebers J. 2006. Taxonomic parameters revisited: tarnished gold standards. Microbiol Today 33:152–155.
   Google Scholar
• Tamura K, Nei DJM, Kumar S. 2007. Molecular Evolutionary Genetics Analysis Version 4.0. Centre of Evlutionary Functional Genomics. Tempe, AZ: Biodesign Institute, Arizona State University.
   Google Scholar
• Tamura K, Nei M, Kumar S. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc Nat Acad Sci 101(30):11030–11035.
   PubMed Web of Science ®Google Scholar
• Troll G, Matthies D, Hofstetter A, Skeries W. 1994. Recent and subrecent marine sediments of the North-Western Weddell Sea and the Bransfield Strait, Antractica. Polarforschung 62(2–3):129–144.
   Google Scholar
• Webster JG, Nordstrom DK. 2003. Geothermal Arsenic. Arsenic in Ground Water. New York, NY: Springer, p101–125.
   Google Scholar
• Wefer G, Fischer G, Füetterer D, Gersonde R. 1988. Seasonal particle flux in the Bransfield Strait, Antartica. Deep Sea Res Part A. Oceanogr Res Pap 35(6):891–898.
   Web of Science ®Google Scholar
• Wentworth CK. 1922. A scale of grade and class terms for clastic sediments. J Geol 30(5):377–392.
   Google Scholar
• Yoon H, Park B, Chang S, Han M, Oh J. 1994. Depositional environment of near-surface sediments, King George Basin, Bransfield Strait, Antarctica. Geo-Mar Lett 14(1):1–9.
   Web of Science ®Google Scholar
• Zeng X, Zhang Z, Li X, Jebbar M, Alain K, Shao Z. 2015. Caloranaerobacter ferrireducens sp. nov., an anaerobic, thermophilic, iron (III)-reducing bacterium isolated from deep-sea hydrothermal sulfide deposits. Int J Syst Evol Microbiol 65(6):1714–1718.
   PubMed Web of Science ®Google Scholar
• Zhou M, Niiler PP, Zhu Y, Dorland RD. 2006. The western boundary current in the Bransfield Strait, Antarctica. Deep Sea Res Part I 53(7):1244–1252.
   Web of Science ®Google Scholar