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Research Articles

Characterization of Bacterial Exudates Through Potentiometric Titrations

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Pages 172-182 | Received 28 Apr 2023, Accepted 19 Dec 2023, Published online: 08 Jan 2024

References

  • Borrok D, Turner BF, Fein JB. 2005. A universal surface complexation framework for modeling proton binding onto bacterial surfaces in geologic settings. Am. J. Sci. 305(6-8):826–853.
  • Churchill SA, Walters JV, Churchill PF. 1995. Sorption of heavy metals by prepared bacterial cell surfaces. J Environ Eng 121(10):706–711.
  • Djemiel C, Dequiedt S, Karimi B, Cottin A, Horrigue W, Bailly A, Boutaleb A, Sadet-Bourgeteau S, Maron P-A, Chemidlin Prévost-Bouré N, et al. 2022. Potential of meta-omics to provide modern microbial indicators for monitoring soil quality and securing food production. Front Microbiol 13:889788.
  • Fein JB, Boily J-F, Yee N, Gorman-Lewis D, Turner BF. 2005. Potentiometric titrations of Bacillus subtilis cells to low pH and a comparison of modeling approaches. Geochim Cosmochim Acta 69(5):1123–1132.
  • Fomenko DE, Marino SM, Gladyshev VN. 2008. Functional diversity of cysteine residues in proteins and unique features of catalytic redox-active cysteines in thiol oxidoreductases. Mol Cells 26(3):228–235.
  • Giles NM, Watts AB, Giles GI, Fry FH, Littlechild JA, Jacob C. 2003. Metal and redox modulation of cysteine protein function. Chem Biol 10(8):677–693.
  • Joe-Wong C, Shoenfelt E, Hauser EJ, Crompton N, Myneni SCB. 2012. Estimation of reactive thiol concentrations in dissolved organic matter and bacterial cell membranes in aquatic systems. Environ Sci Technol 46(18):9854–9861.
  • Jones OAH, Sdepanian S, Lofts S, Svendsen C, Spurgeon DJ, Maguire ML, Griffin JL. 2014. Metabolomic analysis of soil communities can be used for pollution assessment. Environ Toxicol Chem 33(1):61–64.
  • Kawasaki N, Benner R. 2006. Bacterial release of dissolved organic matter during cell growth and decline: Molecular origin and composition. Limnol Oceanogr 51(5):2170–2180.
  • Keiblinger KM, Fuchs S, Zechmeister-Boltenstern S, Riedel K. 2016. Soil and leaf litter metaproteomics—a brief guideline from sampling to understanding. FEMS Microbiol Ecol 92(11):fiw180.
  • Kenney JPL, Song Z, Bunker BA, Fein JB. 2012. An experimental study of Au removal from solution by non-metabolizing bacterial cells and their exudates. Geochim Cosmochim Acta 87:51–60.
  • Neidhardt FC, Ingraham JL, Schaechter M. 1990. Physiology of the Bacterial Cell: A Molecular Approach. Sunderland, Mass: Sinauer Associates.
  • Ohnuki T, Yoshida T, Ozaki T, Kozai N, Sakamoto F, Nankawa T, Suzuki Y, Francis AJ. 2007. Chemical speciation and association of plutonium with bacteria, kaolinite clay, and their mixture. Environ Sci Technol 41(9):3134–3139.
  • Poole LB. 2015. The basics of thiols and cysteines in redox biology and chemistry. Free Radic Biol Med 80:148–157.
  • Rochfort S, Ezernieks V, Mele P, Kitching M. 2015. NMR metabolomics for soil analysis provide complementary, orthogonal data to MIR and traditional soil chemistry approaches – a land use study. Magn Reson Chem 53(9):719–725.
  • Seders LA, Fein JB. 2011. Proton binding of bacterial exudates determined through potentiometric titrations. Chem Geol 285(1–4):115–123.
  • Smith RM, Martell AE. 1989. Critical Stability Constants: Second Supplement. New York: Springer.
  • Sullivan LC, Boyanov MI, Wright JT, Warren MC, Kemner KM, Fein JB. 2022. Reduction of selenite by bacterial exudates. Geochim Cosmochim Acta 338:154–164.
  • Swenson TL, Jenkins S, Bowen BP, Northen TR. 2015. Untargeted soil metabolomics methods for analysis of extractable organic matter. Soil Biol Biochem 80:189–198.
  • Westall JC. 1982. FITEQL: A Computer Program for Determination of Chemical Equilibrium Constants from Experimental Data. Corvallis: Department of Chemistry, Oregon State University.
  • Yu Q, Boyanov MI, Liu J, Kemner KM, Fein JB. 2018. Adsorption of selenite onto Bacillus subtilis: the overlooked role of cell envelope sulfhydryl sites in the microbial conversion of Se(IV). Environ Sci Technol 52(18):10400–10407.
  • Yu Q, Fein JB. 2016. Sulfhydryl binding sites within bacterial extracellular polymeric substances. Environ Sci Technol 50(11):5498–5505.
  • Yu Q, Fein JB. 2024. Analysis of total thiol concentrations in environmental samples using ultra-high performance liquid chromatography-mass spectrometry (UHPLC-MS). Chem Geol. 644:121837.
  • Yu Q, Szymanowski J, Myneni SCB, Fein JB. 2014. Characterization of sulfhydryl sites within bacterial cell envelopes using selective site-blocking and potentiometric titrations. Chem Geol 373:50–58.
  • Zhang Z, Qu Y, Li S, Feng K, Wang S, Cai W, Liang Y, Li H, Xu M, Yin H, et al. 2017. Soil bacterial quantification approaches coupling with relative abundances reflecting the changes of taxa. Sci Rep 7(1):4837.

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