References
- Berry , D. A. , Parmigiani , G. , Sanchez , J. , Schildkraut , J. and Winer , E. 1997 . “Probability of Carrying a Mutation of Breast-Ovarian Cancer Gene BRCA1 Based on Family History,” . Journal of the National Cancer Institute , 89 : 227 – 238 .
- Claus , E. B. , Risch , N. and Thompson , W. D. 1991 . “Genetic Analysis of Breast Cancer in the Cancer and Steroid Hormone Study,” . American Journal of Human Genetics , 48 : 232 – 242 .
- Claus , E. B. , Risch , N. and Thompson , W. D. 1994 . “Autosomal Dominant Inheritance of Early-Onset Breast Cancer: Implications for Risk Prediction,” . Cancer , 73 : 643 – 651 .
- Claus , E. B. , Schildkraut , J. M. , Thompson , W. D. and Risch , N. J. 1996 . “The Genetic Attributable Risk of Breast and Ovarian Cancer,” . Cancer , 77 : 2318 – 2324 .
- Clayton , D. G. 1991 . “A Monte Carlo Method for Bayesian Inference in Frailty Models,” . Biometrics , 47 : 467 – 485 .
- Couch , F. J. , DeShano , M. L. , Blackwood , M. A. , Calzone , K. , Stopfer , J. , Campeau , L. , Ganguly , A. , Rebbeck , T. , Weber , B. L. , Jablon , L. , Cobleigh , M. A. , Hoskins , K. and Garber , J. E. 1997 . “BRCA1 Mutations in Women Attending Clinics That Evaluate the Risk of Breast Cancer,” . New England Journal of Medicine , 336 : 1409 – 15 .
- Cox , D. R. 1972 . “Regression Models and Life Tables,” . Journal of the Royal Statistical Society , 34 : 187 – 220 . Ser. B
- Ford , D. and Easton , D. F. 1995 . “The Genetics of Breast and Ovarian Cancer,” . Br J Cancer , 72 : 805 – 812 .
- Ford , D. , Easton , D. F. , Stratton , M. , Narod , S. , Goldgar , D. , Devilee , P. , Bishop , D. T. , Weber , B. , Lenoir , G. , Chang-Claude , J. , Sobol , H. , Teare , M. D. , Struewing , J. , Arason , A. , Scherneck , S. , Peto , J. , Rebbeck , T. R. , Tonin , P. , Neuhausen , S. , Barkardottir , R. , Eyfjord , J. , Lynch , H. , Ponder , B. A. J. , Gayther , S. A. , Birch , J. M. , Lindblom , A. , Stoppa-Lyonnet , D. , Bignon , Y. , Borg , A. , Hamann , U. , Haites , N. , Scott , R. J. , Maugard , C. M. , Vasen , H. , Seitz , S. , Cannon-Albright , L. A. , Schofield , A. and Zelada-Hedman, M., and the Breast Cancer Linkage Consortium . 1998 . “Genetic Heterogeneity and Penetrance Analysis of the BRCA1 and BRCA2 Genes in Breast Cancer Families,” . Am. J. Hum. Genet , 62 : 676 – 689 .
- Futreal , P. A. , Liu , Q. , Shattuck-Eidens , D. , Cochran , C. , Harshman , K. , Tavtigian , S. , Bennett , L. M. , Haugen-Strano , A. , Swensen , J. , Miki , Y. , Eddington , K. , McClure , M. , Frye , C. , Weaver-Feldhaus , J. , Ding , W. , Gholami , Z. , Soederkvist , P. , Terry , L. , Jhanwar , S. , Berchuck , A. , Iglehart , J. D. , Marks , J. , Ballinger , D. G. , Barrett , J. C. , Skolnick , M. H. , Kamb , A. and Wiseman , R. 1994 . “BRCA1 Mutations in Primary Breast and Ovarian Carcinomas,” . Science , 226 : 120 – 122 .
- Gail , M. H. , Brinton , L. A. , Byar , D. P. , Corle , D. K. , Green , S. B. , Schairer , C. and Mulvhill , J. J. 1989 . “Projecting Individualized Probabilities of Developing Breast Cancer for White Females Who are Being Examined Annually,” . Journal of the National Cancer Institute , 81 : 1879 – 1886 .
- Gauderman , W. J. and Thomas , D. C. 1994 . “Censored Survival Models for Genetic Epidemiology: A Gibbs Sampling Approach,” . Genetic Epidemiology , 11 : 171 – 188 .
- Gilks , W. R. , Richardson , S. and Spiegelhalter , D. J. , eds. 1996 . Markov Chain Monte Carlo in Practice , London : Chapman and Hall .
- Gilks , W. R. and Roberts , G. O. 1996 . “Strategies for Improving MCMC,” . In Markov Chain Monte Carlo in Practice , Edited by: Gilks , W. R. , Richardson , S. and Spiegelhalter , D. J. 89 – 114 . London : Chapman and Hall .
- Hastings , W. K. 1970 . “Monte Carlo Sampling Methods Using Markov Chains and Their Applications,” . Biometrika , 57 : 97 – 109 .
- Heidelberger , P. and Welch , P. 1983 . “Simulation Run Length Control in the Presence of an Initial Transient,” . Operations Research , 31 : 1109 – 1144 .
- Hilsenbeck , S. G. , Wenger , C. R. , Reynolds , L. P. , Rojas , L. C. and Osborne , C. K. 1997 . “Early Results of Genetic Testing for Breast Cancer Susceptibility,” . Breast Cancer Research and Treatment , 46 : 38
- Houwing-Duistermaat , J. J. 1997 . Statistical Methods for Family Data , Leiden : Leiden University Press .
- Hunt , S. C. , Williams , R. R. and Barlow , G. K. 1986 . “A Comparison of Positive Family History Definitions for Defining Risk of Future Disease,” . Journal of Chronic Diseases , 39 ( 10 ) : 809 – 21 .
- Iversen , E. S. Jr. , Parmigiani , G. and Berry , D. 1998 . “Validating Bayesian Prediction Models: A Case Study in Genetic Susceptibility to Breast Cancer,” . Case Studies In Bayesian Statistics , Vol. IV : 321 – 338 .
- Jain , M. and Miller , A. B. 1994 . “Pre-Morbid Body Size and the Prognosis of Women with Breast Cancer,” . Int J Cancer , 59 : 363 – 8 .
- Johannsson , O. , Ranstam , J. , Borg , A. and Olsson , H. 1998 . “Survival of BRCA1 Breast and Ovarian Cancer Patients: A Population-Based Study from Southern Sweden,” . Lancet , 351 : 304 – 305 .
- Kalbfleisch , J. D. 1978 . “Non-Parametric Bayesian Analysis of Survival Time Data,” . Journal of the Royal Statistical Society , 40 : 214 – 221 . Ser. B
- Kee , F. , Collins , B. J. and Patterson , C. C. 1991 . “Prognosis in Familial Non-Polyposis Colorectal Cancer,” . Gut , 33 ( 6 ) : 787 – 90 .
- Lange , K. 1997 . Mathematical and Statistical Methods for Genetic Analysis , Berlin : Springer .
- Lee , J. , Wacholder , S. , Struewing , J. , McAdams , M. , Pee , D. , Brody , L. , Tucker , M. and Hartge , P. 1999 . “Survival After Breast Cancer in Ashkenazi Jewish BRCA1 and BRCA2 Mutation Carriers,” . Journal of the National Cancer Institute , 19 : 259 – 263 .
- Lee , N. C. , Wingo , P. A. , Gwinn , M. L. , Rubin , G. L. , Kendrick , J. S. , Webster , L. A. and Ory , H. W. 1987 . “The Reduction of Risk of Ovarian Cancer Associated with Oral-Contraceptive Use,” . New England Journal of Medicine , 316 : 650 – 655 .
- Li , H. and Thompson , E. A. 1997 . “Semiparametric Estimation of Major Gene and Family-Specific Random Effects for Age of Onset,” . Biometrics , 53 : 282 – 293 .
- Li , H. , Thompson , E. A. and Wijsman , E. M. 1997 . “Semiparametric Estimation of Major Gene Effects for Age of Onset,” . Genetic Epidemiology , 15 ( 3 ) : 279 – 298 .
- Markus , J. N. , Watson , P. , Page , D. L. , Narod , S. A. , Lenoir , G. M. , Tonin , P. , Linder-Stephenson , L. , Salerno , G. , Conway , T. A. and Lynch , H. T. 1996 . “Hereditary Breast Cancer: Pathobiology, Prognosis, and BRCA1 and BRCA2 Gene Linkage,” . Cancer , 77 : 697 – 709 .
- Miki , Y. , Swenson , J. , Shattuck-Eidens , D. , Futreal , P. A. , Harshman , K. , Tavtigian , S. , Liu , Q. , Cochran , C. , Bennett , L. M. , Ding , W. , Bell , R. Rosenthal , J. 1994 . “A Strong Candidate for the Breast and Ovarian Cancer Susceptibility Gene BRCA1,” . Science , 266 : 66 – 71 .
- Murphy , E. A. and Chase , G. A. 1974 . Principles of Genetic Counseling , Chicago : Year Book Medical Publishers .
- Murphy , E. A. and Mutalik , G. S. 1969 . “The Application of Bayesian Methods in Genetic Counseling,” . Human Heredity , 19 : 126 – 151 .
- National Cancer Institute: Surveillance, Epidemiology, and End Results (SEER) Program . 1997 . SEER homepage http://www-seer.ims.nci.nih.gov
- Newman , B. , Millikan , R. C. and King , M-C. 1997 . “Genetic Epidemiology of Breast and Ovarian Cancers,” . Epidemiologic Reviews , 19 : 69 – 79 .
- Oddoux , C. , Struewing , J. P. , Clayton , C. M. , Neuhausen , S. , Brody , L. C. , Kaback , M. , Haas , B. , Norton , L. , Borgen , P. , Jhanwar , S. , Goldgar , D. , Ostrer , H. and Offit , K. 1996 . “The Carrier Frequency of the BRCA2 6174delT Mutation Among Ashkenazi Jewish Individuals is Approximately 1%,” . Nature Genetics , 14 : 188 – 190 .
- Parmigiani , G. , Berry , D. A. and Aguilar , O. 1998 . “Determining Carrier Probabilities for Breast Cancer Susceptibility Genes BRCA1 and BRCA2,” . American Journal of Human Genetics , 62 : 145 – 158 .
- Perkins , P. , Cooksley , C. D. and Cox , J. D. 1996 . “Breast Cancer: Is Ethnicity an Independent Prognostic Factor for Survival,” . Cancer , 78 : 1241 – 7 .
- Porter , D. E. , Cohen , B. B. , Wallace , M. R. , Smyth , E. , Chetty , U. , Dixon , J. M. , Steel , C. M. and Carter , D. C. 1994 . “Breast Cancer Incidence, Penetrance and Survival in Probable Carriers of BRCA1 Gene Mutation in Families Linked to BRCA1 on Chromosome 17q12–21,” . British Journal of Surgery , 81 : 1512 – 1515 .
- Porter , D. E. , Dixon , M. , Smyth , E. and Steel , C. M. 1993 . “Breast Cancer Survival in BRCA1 Carriers,” . Lancet , 341 : 184 – 185 .
- Prentice , R. L. 1982 . “Covariate Measurement Errors and Parameter Estimation in a Failure Time Regression Model (corr: V71 p219),” . Biometrika , 69 : 331 – 342 .
- Raftery , A. E. and Lewis , S. M. 1996 . “Implementing MCMC,” 115 – 127 . See Gilks, Richardson, and Spiegelhalter (1996)
- Reed , T. , Wagener , D. K. , Donahue , R. P. and Kuller , L. H. 1986 . “Family History of Cancer Related to Cholesterol Level in Young Adults,” . Genetic Epidemiology , 3 : 63 – 71 .
- Roa , B. B. , Boyd , A. A. , Volcik , K. and Richards , C. S. 1996 . “Ashkenazi Jewish Population Frequencies for Common Mutations in BRCA1 and BRCA2,” . Nature Genetics , 14 : 185 – 187 .
- Rubin , S. C. , Benjamin , I. , Behbakht , K. , Takahashi , H. , Morgan , M. A. , LiVolsi , V. A. , Berchuck , A. , Muto , M. G. , Garger , J. E. , Weber , B. L. , Lynch , H. T. and Boyd , J. 1996 . “Clinical and Pathological Features of Ovarian Cancer in Women with Germline Mutations of BRCA1,” . New England Journal of Medicine , 335 : 1413 – 1416 .
- Schildkraut , J. M. and Thompson , W. D. 1988 . “Familial Ovarian Cancer: A Population-Based Case-Control Study,” . American Journal of Epidemiology , 128 : 456 – 466 .
- Sharan , S. K. , Morimatsu , M. , Albrecht , U. , Lim , D-S. , Regel , E. , Dinh , C. , Sands , A. , Eichele , G. , Hasty , P. and Bradley , A. 1997 . “Embrionic Lethality and Radiation Hybersensitivity Mediated by Rad51 in Mice Lacking Brca2,” . Nature , 386 : 804 – 810 .
- Slattery , M. L. and Kerber , R. A. 1993 . “A Comprehensive Evaluation of Family History and Breast Cancer Risk,” . Journal of the American Medical Association , 270 ( 13 ) : 1563 – 8 .
- Struewing , J. P. , Hartge , P. , Wacholder , S. , Baker , S. M. , Berlin , M. , McAdams , M. , Timmerman , M. M. , Brody , L. C. and Tucker , M. A. 1997 . “The Risk of Cancer Associated with Specific Mutations of BRCA1 and BRCA2 Among Ashkenazi Jews,” . New England Journal of Medicine , 336 : 1401
- Szabo , C. I. and King , M-C. 1997 . “Population Genetics of BRCA1 and BRCA2,” . American Journal of Human Genetics , 60 : 1013 – 1020 .
- Thomas , D. C. and Gauderman , W. J. 1996 . “Gibbs Sampling Methods in Genetics,” . In Markov Chain Monte Carlo in Practice , Edited by: Gilks , W. R. , Richardson , S. and Spiegelhalter , D. J. 419 – 440 . London : Chapman and Hall .
- Tierney , L. 1994 . “Markov Chains for Exploring Posterior Distributions,” . The Annals of Statistics , 22 December : 1701 – 1762 . (with discussion)
- Watson , P. , Marcus , J. and Lynch , H. 1998 . “Prognosis of BRCA1 Hereditary Breast Cancer,” . Lancet , 351 : 304 – 305 .
- Wooster , R. , Bignell , G. , Lancaster , J. , Swift , S. , Seal , S. and Mangion , J. 1995 . “Identification of the Breast Cancer Susceptibility Gene BRCA2,” . Nature , 378 : 789 – 92 .