The 5S rRNA and the rRNA intergenic spacer of the two varieties of Cryptococcus neoformans

References

• Clark CG. On the evolution of ribosomal RNA. J Molec Evol 1987; 25: 343–350
   PubMed Web of Science ®Google Scholar
• Cassidy JR, Moore D, Lu BC, Pukkila PJ. Unusual organization and lack of recombination in the ribosomal RNA genes of Coprinus cinereus. Curr Genet 1984; 8: 607–613
   PubMed Web of Science ®Google Scholar
• Nath K, Bollon AP. Organization of the yeast ribosomal RNA gene cluster via cloning and restriction analysis. J Biol Chem 1977; 252: 6562–6571
   PubMed Web of Science ®Google Scholar
• Selker EU, Yanofsky C, Driftmier K, Metzenberg RL, Alzner-Deweerd B, Rajbhandary UL. Dispersed 5S RNA genes in N. crassa: structure, expression and evolution. Cell 1987; 24: 819–828
   Web of Science ®Google Scholar
• van Heerikhuizen H, Ykema A, Klootwijk J, Gaillardin C, Ballas C, Fournier P. Heterogeneity in the ribosomal RNA genes of the yeast Yarrowia lipolytica; cloning and analysis of two size classes of repeats. Gene 1985; 39: 213–222
   PubMed Web of Science ®Google Scholar
• Moss T. A transcriptional function for the repetitive ribosomal spacer in Xenopus leavis. Nature 1983; 302: 223–228
   PubMed Web of Science ®Google Scholar
• Reeder RH. Enhancers and ribosomal gene spacers. Cell 1984; 38: 349–351
   PubMed Web of Science ®Google Scholar
• McKee BD, Habera L, Vrana JA. Evidence that intergenic spacer repeats of Drosophila melanogaster rRNA genes function as X-Y pairing sites in male meiosis, and a general model for a chiasmatic pairing. Genetics 1992; 132: 529–544
   PubMed Web of Science ®Google Scholar
• Cordesse F, Cooke R, Tremousaygue D, Grellet F, Delseny M. Fine structure and evolution of the rDNA intergenic spacer in rice and other cereals. J Molec Evol 1993; 36: 369–379
   PubMed Web of Science ®Google Scholar
• Wellauer PK, Dawid IB, Brown DD, Reeder RH. The molecular basis for length heterogeneity in ribosomal DNA from Xenopus laevis. J Molec Biol 1976; 105: 461–486
   PubMed Web of Science ®Google Scholar
• Zuger A, Louie E, Holzman RS, Simberkoff MS, Rahal JJ. Cryptococcal disease in patients with the acquired immunodeficiency syndrome: diagnostic features and outcome of treatment. Ann Int Med 1986; 104: 234–240
   PubMed Web of Science ®Google Scholar
• Fan M, Currie BP, Gutell RR, Ragan MA, Casadevall A. The 16S-like, 5·8.S, and 23S-like rRNAs of the two varieties of Cryptococcus neoformans: sequence, secondary structure, phylogenetic analysis, and restriction fragment polymorphisms. J Med Vet Mycol 1994; 32: 163–180
   PubMedGoogle Scholar
• Restrepo BI, Barbour AG. Cloning of the 18S and 25S rDNAs from the pathogenic fungus Cryptococcus neoformans. J Bacteriol 1989; 171: 5596–5600
   PubMed Web of Science ®Google Scholar
• Kwon-Chung KJ, Bennett JE. Cryptococcosis. Medical Mycology. Lea & Febiger, Philadelphia 1992; 397–446, In
   Google Scholar
• Casadevall A, Freundlich LF, Marsh L, Scharff MD. Extensive allelic variation in Cryptococcus neoformans. J Clin Microbiol 1992; 30: 1080–1084
   PubMed Web of Science ®Google Scholar
• Specht T, Wolters J, Erdmann VA. Compilation of 5S rRNA and 5S rRNA gene sequences. Nucl Acids Res 1990; 18: 2215–2230, (Suppl.)
   PubMed Web of Science ®Google Scholar
• Specht T, Wolters J, Erdmann VA. Compilation of 5S rRNA and 5S rRNA gene sequences. Nucl Acids Res 1991; 19: 2189–2191, (Suppl.)
   PubMed Web of Science ®Google Scholar
• Dixon MT, Hillis DM. Ribosomal RNA secondary structure: compensatory mutations and implications for phylogenetic analysis. Molec Biol Evol 1993; 10: 256–267
   PubMed Web of Science ®Google Scholar
• Wheeler WC, Honeycutt RC. Paired sequence difference in ribosomal RNAs: evolutionary and phylogenetic implications. Molec Biol Evol 1988; 5: 90–96
   PubMed Web of Science ®Google Scholar
• Devereux J, Haeberli P, Smithies O. A comprehensive set of sequence analysis programs for the Vax. Nucl Acids Res 1984; 12: 387–395
   PubMed Web of Science ®Google Scholar
• Pustell J, Kafatos FC. A convenient and adaptable package of computer programs for DNA and protein sequence management, analysis and homology determination. Nucl Acids Res 1984; 12: 643–655
   PubMed Web of Science ®Google Scholar
• Myers EW, Miller W. Optimal alignments in linear space. Comput Appl Biosci 1988; 4: 11–17
   PubMedGoogle Scholar
• Pearson WR. Rapid and sensitive sequence comparison with FASTP and FASTA. Meth Enzymol 1990; 183: 63–98
   PubMed Web of Science ®Google Scholar
• McMullen MD, Hunter B, Phillips RL, Rubenstein I. The structure of the maize ribosomal DNA spacer region. Nucl Acids Res 1986; 14: 4953–4968
   PubMed Web of Science ®Google Scholar
• Novak, EM, de Mello, MP, Gomes, HBM, et al. Repetitive sequences in the ribosomal intergenic spacer of Trypanosoma cruzi. Molec Biochem Parasitol 1993; 60: 273–280
   PubMed Web of Science ®Google Scholar
• Kurtzman CP. rRNA sequence comparisons for assessing phylogenetic relationships among yeasts. Int J Syst Bacteriol 1992; 42: 1–6
   PubMedGoogle Scholar
• Currie BP, Freundlich LF, Casadevall A. Restriction fragment length polymorphism analysis of Cryptococcus neoformans isolates from environmental (pigeon excreta) and clinical sources in New York City. J Clin Microbiol 1994; 32: 1188–1192
   PubMed Web of Science ®Google Scholar
• Kwon-Chung KJ, Chang YC. Gene arrangement and sequence of the 5S rRNA in Filobasidiella neoformans (Cryptococcus neoformans) as a phylogenetic indicator. Int J Syst Bacteriol 1994; 44: 209–213
   PubMedGoogle Scholar
• Cassidy JR, Pukkila PJ. Inversion of 5S ribosomal RNA genes within the genus Coprinus. Curr Genet 1987; 12: 33–36
   PubMed Web of Science ®Google Scholar
• Gruendler P, Unfried I, Pascher K, Schweizer D. rDNA intergenic region from Arabidopsis thaliana. J. Molec Biol 1991; 221: 1209–1222
   PubMed Web of Science ®Google Scholar
• Walker WF, Doolittle WF. Re-dividing the basidiomycetes on the basis of 5S rRNA sequences. Nature 1982; 299: 723–724
   PubMed Web of Science ®Google Scholar
• van de Peer, Y, Hendricks, L, Goris, A, et al. Evolution of basidiomycetous yeasts as deduced from small ribosomal subunit RNA sequences. System Appl Microbiol 1992; 15: 250–258
   Web of Science ®Google Scholar
• Yamada Y, Nagahama T, Kawasaki H, Banno I. Significance of the co-enzyme Q-system in the classification of yeasts and yeast like organisms. 36. The phylogenetic relationship of the genera Phaffia Miller, Yoneyama et Soneda and Cryptococcus Kutzing Emend. Phaff et Spencer (Cryptococcaceae) based on the partial sequences of 18S and 26S ribosomal ribonucleic acids. J Gen Appl Microbiol 1990; 36: 403–414
   Web of Science ®Google Scholar
• Jemtland R, Maehlum E, Gabrielsen OS, Oyen TB. Regular distribution of length heterogeneities within non-transcribed spacer regions of cloned and genomic rDNA of Saccharomyces cerevisiae. Nucl Acids Res 1986; 14: 5145–5158
   PubMed Web of Science ®Google Scholar
• Spreadbury CL, Bainbridge BW, Cohen J. Restriction fragment length polymorphisms in isolates of Aspergillus fumigatus probed with part of the intergenic spacer region from the ribosomal RNA gene complex of Aspergillus nidulans. J Gen Microbiol 1990; 136: 1991–1994
   PubMedGoogle Scholar
• Rustchenko EP, Curran TM, Sherman F. Variations in the number of ribosomal DNA units in morphological mutants and normal strains of Candida albicans and in normal strains of Saccharomyces cerevisiae. J Bacteriol 1993; 175: 7189–7199
   PubMed Web of Science ®Google Scholar
• Luschnig C, Bachmair A, Schweizer D. Intraspecific length heterogeneity of the rDNA-IGR in Arabidopsis thaliana due to homologous recombination. Plant Molec Biol 1993; 22: 543–545
   PubMed Web of Science ®Google Scholar
• Kwon-Chung KJ. A new genus, Filobasidiella, the perfect state of Cryptococcus neoformans. Mycologia 1975; 67: 1197–1200
   PubMed Web of Science ®Google Scholar
• Kwon-Chung KJ. A new species of Filobasidiella, the sexual state of Cryptococcus neoformans B and C serotypes. Mycologia 1976; 68: 943–946
   PubMed Web of Science ®Google Scholar