330
Views
0
CrossRef citations to date
0
Altmetric
Research articles

Haplotyping cryptic Adélie penguin taxa using low-cost, high-resolution melt curves

, , , &
Pages 163-170 | Received 14 Sep 2015, Accepted 25 Nov 2015, Published online: 09 Jun 2016

References

  • Ainley D. 2002. The Adélie penguin. Bellwether of climate change. New York: Columbia University Press.
  • Banks JC, Cruickshank RH, Drayton GM, Paterson AM. 2008. Few genetic differences between Victorian and Western Australian blue penguins, Eudyptula minor. New Zeal J Zool. 35:265–270. doi: 10.1080/03014220809510123
  • Banks JC, van Buren A, Cherel Y, Whitfield JB. 2006. Genetic evidence for three species of rockhopper penguins, Eudyptes chrysocome. Polar Biol. 30:61–67. doi: 10.1007/s00300-006-0160-3
  • Banks JC, Mitchell AD, Waas JR, Paterson AM. 2002. An unexpected pattern of molecular divergence within the blue penguin (Eudyptula minor) complex. Notornis. 49:29–38.
  • Chou Q, Russell M, Birch DE, Raymond J, Bloch W. 1992. Prevention of pre-PCR mis-priming and primer dimerization improves low-copy-number amplifications. Nucleic Acids Res. 20:1717–1723. doi: 10.1093/nar/20.7.1717
  • Clark J, Banks J, Agnew P, Gamboa R, Mason A, Waas J. 2015. Pairing patterns in mixed-clade colonies of little blue penguins. 9th Oamaru Penguin Symposium 2014. New Zeal J Zool. 42:33.
  • Cooper J, Brown CR, Gales RP, Hindell MA, Klages NTW, Moors PJ, Pemberton D, Ridoux V, Thompson KR, van Heezik YM. 1990. Diets and dietary segregation of crested penguins (Eudyptes). In: Davis LS, Darby JT, editors. Penguin biology. San Diego: Academic Press; p. 131–156.
  • Deagle B, Eveson JP, Jarman S. 2006. Quantification of damage in DNA recovered from highly degraded samples—a case study on DNA in faeces. Front Zool. 3:11. doi: 10.1186/1742-9994-3-11
  • de Dinechin M, Dobson FS, Zehtindjiev P, Metcheva R, Couchoux C, Martin A, Quillfeldt P, Jouventin P. 2012. The biogeography of Gentoo Penguins (Pygoscelis papua). Can J Zool. 90:352–360. doi: 10.1139/z2012-016
  • de Dinechin M, Ottvall R, Quillfeldt P, Jouventin P. 2009. Speciation chronology of rockhopper penguins inferred from molecular, geological and palaeoceanographic data. J Biogeogr. 36:693–702. doi: 10.1111/j.1365-2699.2008.02014.x
  • Grosser S, Robertson BC, Rawlence N, Waters JM. 2014. Population genetics of little blue penguins, Eudyptula minor. 9th Oamaru Penguin Symposium.
  • Hitchmough R. 2013. Summary of changes to the conservation status of taxa in the 2008–11 New Zealand Threat Classification System listing cycle. Wellington: Department of Conservation.
  • Hitchmough R, Bull L, Cromarty P. 2007. New Zealand Threat Classification System lists—2005. Wellington: Department of Conservation.
  • IUCN. 2014. IUCN Red List of Threatened Species. Version 2014.2. [cited 2014 Sept 30]. Available from: http://www.iucnredlist.org/
  • Jouventin P. 1982. Visual and vocal signals in penguins, their evolution and adaptive characters. In: Wickler W, Curio E, editors. Advances in ethology No. 24. Berlin: Verlag Paul Parey; p. 148.
  • Kinsky FC, Falla RA. 1976. A subspecific revision of the Australasian Blue Penguin (Eudyptula minor) in the New Zealand region. Nat Mus New Zeal Rec. 1:105–126.
  • Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R and others. 2007. Clustal W and Clustal X version 2.0. Bioinformatics. 23:2947–2948. doi: 10.1093/bioinformatics/btm404
  • LaRue MA, Ainley DG, Swanson M, Dugger KM, Lyver POB, Barton, K, Ballard G. 2013. Climate change winners: Receding ice fields facilitate colony expansion and altered dynamics in an Adélie penguin metapopulation. PLoS One. 8:e60568. doi: 10.1371/journal.pone.0060568
  • Mace GM. 2004. The role of taxonomy in species conservation. Philos Trans R Soc London Ser B: Biolog Sci. 359:711–719. doi: 10.1098/rstb.2003.1454
  • Macey S, Meadows M, Clark J, Banks J, Agnew P, Henriquez M, Waas J. 2015. The blue in little blue penguins: Quantifying colour and colour patterns by sex and clade. Proceedings of the 9th Oamaru Penguin Symposium 2014. New Zeal J Zool. 42:33–34.
  • Marchant S, Higgins PJ. 1990. Handbook of Australian, New Zealand and Antarctic birds. Oxford: Oxford University Press.
  • Martinez I. 1992. Order Sphenisciformes. In: Del Hoyo J, Elliott A, Sargatal J, editors. Handbook of the birds of the world. Barcelona: Lynx Edicions; p. 140–160.
  • McNeely JA. 2002. The role of taxonomy in conserving biodiversity. J Nat Conser. 10:145–153. doi: 10.1078/1617-1381-00015
  • Morrison WRIII, Lohr JL, Duchen P, Wilches R, Trujillo D, Mair M, Renner SS. 2009. The impact of taxonomic change on conservation: does it kill, can it save, or is it just irrelevant? Biol Conser. 142:3201–3206. doi: 10.1016/j.biocon.2009.07.019
  • Parmesan C. 1996. Climate and species’ range. Nature. 382:765–766. doi: 10.1038/382765a0
  • Parmesan C, Yohe G. 2003. A globally coherent fingerprint of climate change impacts across natural systems. Nature. 421:37–42. doi: 10.1038/nature01286
  • Ritchie PA, Millar CD, Gibb GC, Baroni C, Lambert DM. 2004. Ancient DNA enables timing of the Pleistocene origin and Holocene expansion of two Adelie penguin lineages in Antarctica. Mol Biol Evol. 21:240–248. doi: 10.1093/molbev/msh012
  • Root TL, Price JT, Hall KR, Schneider SH, Rosenzweig C, Pounds JA. 2003. Fingerprints of global warming on wild animals and plants. Nature. 421:57–60. doi: 10.1038/nature01333

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.