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ORIGINAL ARTICLES

First full-length sequences of the S gene of European isolates reveal further diversity among turkey coronaviruses

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Pages 179-189 | Received 24 Nov 2010, Published online: 15 Apr 2011

References

  • Ammayappan , A. , Upadhyay , C. , Gelb , J. Jr and Vakharia , V.N. 2009 . Identification of sequence changes responsible for the attenuation of avian infectious bronchitis virus strain Arkansas DPI . Archives of Virology , 154 : 495 – 499 .
  • Andral , B. , Toquin , D. , L'Haridon , R. , Jestin , A. , Metz , M.H. and Rose , R. 1985 . Les diarrhees du dindonneau: un bilan des recherches virales affectuees (rotavirus, reovirus, adenovirus, pseudopicornavirus) . Avian Pathology , 14 : 147 – 162 .
  • Barnes , H.J. , Guy , J.S. and Vaillancourt , J.P. 2000 . Poult enteritis complex . Revue Scientifique et Technique Office Internationale Epizooties , 19 : 565 – 588 .
  • Bosch , B.J. , Martina , B.E. , Van Der Zee , R. , Lepault , J. , Haijema , B.J. Versluis , C. 2004 . Severe acute respiratory syndrome coronavirus (SARS-CoV) infection inhibition using spike protein heptad repeat-derived peptides . Proceedings of the National Academy of Sciences of the United States of America , 101 : 8455 – 8460 .
  • Breslin , J.J. , Smith , L.G. , Fuller , F.J. and Guy , J.S. 1999 . Sequence analysis of the turkey coronavirus nucleocapsid protein gene and 3′ untranslated region identifies the virus as a close relative of infectious bronchitis virus . Virus Research , 65 : 187 – 193 .
  • Brown , T.P. , Garcia , A. and Kelley , L. 1997 . Spiking mortality of turkey poults: 1. Experimental reproduction in isolation facilities . Avian Diseases , 41 : 604 – 609 .
  • Callison , S.A. , Hilt , D.A. , Boynton , T.O. , Sample , B.F. , Robison , R. , Swayne , D.E. and Jackwood , M.W. 2006 . Development and evaluation of a real-time Taqman RT-PCR assay for the detection of infectious bronchitis virus from infected chickens . Journal of Virological Methods , 138 : 60 – 65 .
  • Callison , S.A. , Jackwood , M.W. and Hilt , D.A. 2001 . Molecular characterisation of infectious bronchitis virus isolates foreign to the United States and comparison with United States isolates . Avian Diseases , 45 : 492 – 499 .
  • Cao , J. , Wu , C.C. and Lin , T.L. 2008 . Complete nucleotide sequence of polyprotein gene 1 and genome organization of turkey coronavirus . Virus Research , 136 : 43 – 49 .
  • Cattoli , G. , De Battisti , C. , Toffan , A. , Salviato , A. , Lavazza , A. , Cerioli , M. and Capua , I. 2007 . Co-circulation of distinct genetic lineages of astroviruses in turkeys and guinea fowl . Archives of Virology , 152 : 595 – 602 .
  • Cavanagh , D. and Gelb , J. 2008 . “ Infectious bronchitis ” . In Diseases of Poultry , 12th edn , Edited by: Saif , Y.M. , Fadly , A.M. , Glisson , J.R. , McDougald , L.R. , Nolan , L.K. and Swayne , D.E. 117 – 135 . Ames, IA : Blackwell Publishing Professional .
  • Cavanagh , D. , Davis , P.J. and Mockett , A.P. 1988 . Amino acids within hypervariable region 1 of avian coronavirus IBV (Massachusetts serotype) spike glycoprotein are associated with neutralization epitopes . Virus Research , 11 : 141 – 150 .
  • Cavanagh , D. , Mawditt , K. , Gough , R. , Picault , J.P. and Britton , P. 1998 . “ Sequence analysis of strains of the 793/B genotype (CR88, 4/91) of IBV isolated between 1985 and 1997 ” . In Proceedings of the International Symposium on Infectious Bronchitis and Pneumovirus Infections in Poultry , Edited by: Kaleta , E.F. and Heffels-Redmann , U. 252 Germany : Rauischholzhausen .
  • Cavanagh , D. , Mawditt , K. , Sharma , M. , Drury , S.E. , Ainsworth , H.L. , Britton , P. and Gough , R.E. 2001 . Detection of a coronavirus from turkey poults in Europe genetically related to infectious bronchitis virus of chickens . Avian Pathology , 30 : 355 – 368 .
  • Cavanagh , D. , Mawditt , K. , Welchman D de , B. , Britton , P. and Gough , R.E. 2002 . Coronaviruses from pheasants (Phasianus colchicus) are genetically closely related to coronaviruses of domestic fowl (infectious bronchitis virus) and turkeys . Avian Pathology , 31 : 81 – 93 .
  • Circella , E. , Camarda , A. , Martella , V. , Bruni , G. , Lavazza , A. and Buonavoglia , C. 2007 . Coronavirus associated with an enteric syndrome on a quail farm . Avian Pathology , 36 : 251 – 258 .
  • Collisson , E.W. , Pei , J. , Dzielawa , J. and Seo , S.H. 2000 . Cytotoxic T lymphocytes are critical in the control of infectious bronchitis virus in poultry . Developmental and Comparative Immunology , 24 : 187 – 200 .
  • Da Silva , S.E. , Bonetti , A.M. , Petrocelli , A.T. , Ferrari , H.F. , Luvizotto , M.C. and Cardoso , T.C. 2008 . Detection of Turkey astrovirus in young poults affected with poult enteritis complex in Brazil . The Journal of Veterinary Medical Science , 70 : 629 – 631 .
  • Davelaar , F.G. , Kouwenhoven , B. and Burger , A.G. 1984 . Occurrence and significance of infectious bronchitis virus variant strains in egg and broiler production in the Netherlands . The Veterinary Quarterly , 6 : 114 – 120 .
  • de Groot , R.J. , Ziebuhr , J. , Poon , L.L. , Woo , P.C. , Talbot , P.J. , Rottier P.J.M. , et al. 2008 . Taxonomic proposal to the ICTV Executive Committee: revision of the family Coronaviridae . Available online at http://talk.ictvonline.org/files/ictv_official_taxonomy_updates_since_the_8th_report/m/vertebrate-2008/1230/download.aspx. (accessed 21 February 2011)
  • Domanska-Blicharz , K. , Seroka , A. , Lisowska , A. , Tomczyk , G. & Minta , Z. 2010 . Experimental infection with turkey coronavirus isolate . In H.M. Hafez . Proceedings of the 8th International Symposium on Turkey Diseases (p. 117 125 . Berlin, Germany .
  • Dong , B.Q. , Liu , W. , Fan , X.H. , Vijaykrishna , D. , Tang , X.C. Gao , F. 2007 . Detection of a novel and highly divergent coronavirus from Asian leopard cats and Chinese ferret badgers in Southern China . Journal of Virology , 81 : 6920 – 6926 .
  • Ducatez , M.F. , Martin , A.M. , Owoade , A.A. , Olatoye , I.O. , Alkali , B.R. Maikano , I. 2009 . Characterization of a new genotype and serotype of infectious bronchitis virus in Western Africa . Journal of General Virology , 90 : 2679 – 2685 .
  • Germain , M. & Rousseau , A. 2005 . Syndrome entérite, frilosité, baisse de la croissance de la dinde: étude de cas terrain en France en 2004 . In Proceedings of the 6emes Journées de la Recherche Avicole (p. 408 ). St-Malo, France .
  • Gomaa , M.H. , Barta , J.R. , Ojkic , D. and Yoo , D. 2008 . Complete genomic sequence of turkey coronavirus . Virus Research , 135 : 237 – 246 .
  • Gomaa , M.H. , Yoo , D. , Ojkic , D. and Barta , J.R. 2009 . Infection with a pathogenic turkey coronavirus isolate negatively affects growth performance and intestinal morphology of young turkey poults in Canada . Avian Pathology , 38 : 279 – 286 .
  • Gough , R.E. & Drury , S.E. 1998 . Detection of viruses associated with enteric problems in turkeys . In Proceedings of the 1st International Symposium on Turkey Diseases (p. 218 ). Berlin, Germany .
  • Gough , R.E. , Drury , S.E. , Culver , F. , Britton , P. and Cavanagh , D. 2006 . Isolation of a coronavirus from a green-cheeked Amazon parrot (Amazon viridigenalis Cassin) . Avian Pathology , 35 : 122 – 126 .
  • Guindon , S. and Gascuel , O. 2003 . A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood . Systematic Biology , 52 : 696 – 704 .
  • Guionie , O. , Toquin , D. , Sellal , E. , Bouley , S. , Zwingelstein , F. Allee , C. 2007 . Laboratory evaluation of a quantitative real-time reverse transcription PCR assay for the detection and identification of the four subgroups of avian metapneumovirus . Journal of Virological Methods , 139 : 150 – 158 .
  • Guy , J.S. 1998 . Virus infections of the gastrointestinal tract of poultry . Poultry Science , 77 : 1166 – 1175 .
  • Guy , J.S. 2008 . “ Turkey coronavirus enteritis ” . In Diseases of Poultry , 12th edn , Edited by: Saif , Y.M. , Fadly , A.M. , Glisson , J.R. , McDougald , L.R. , Nolan , L.K. and Swayne , D.E. 330 – 338 . Ames, IA : Blackwell Publishing Professional .
  • Guy , J.S. , Barnes , H.J. , Smith , L.G. and Breslin , J. 1997 . Antigenic characterization of a turkey coronavirus identified in poult enteritis- and mortality syndrome-affected turkeys . Avian Diseases , 41 : 583 – 590 .
  • Heggen-Peay , C.L. , Qureshi , M.A. , Edens , F.W. , Sherry , B. , Wakenell , P.S. , O'Connell , P.H. and Schat , K.A. 2002 . Isolation of a reovirus from poult enteritis and mortality syndrome and its pathogenicity in turkey poults . Avian Diseases , 46 : 32 – 47 .
  • Hughes , L.A. , Savage , C. , Naylor , C. , Bennett , M. , Chantrey , J. and Jones , R. 2009 . Genetically diverse coronaviruses in wild bird populations of northern England . Emerging Infectious Diseases , 15 : 1091 – 1094 .
  • Jackwood , M.W. , Boynton , T.O. , Hilt , D.A. , McKinley , E.T. , Kissinger , J.C. Paterson , A.H. 2010 . Emergence of a group 3 coronavirus through recombination . Virology , 398 : 98 – 108 .
  • Jindal , N. , Patnayak , D.P. , Ziegler , A.F. , Lago , A. and Goyal , S.M. 2009a . Experimental reproduction of poult enteritis syndrome: clinical findings, growth response, and microbiology . Poultry Science , 88 : 949 – 958 .
  • Jindal , N. , Patnayak , D.P. , Ziegler , A.F. , Lago , A. and Goyal , S.M. 2009b . A retrospective study on poult enteritis syndrome in Minnesota . Avian Diseases , 53 : 268 – 275 .
  • Jonassen , C.M. , Kofstad , T. , Larsen , I.L. , Løvland , A. , Handeland , K. , Follestad , A. and Lillehaug , A. 2005 . Molecular identification and characterization of novel coronaviruses infecting graylag geese (Anser anser), feral pigeons (Columbia livia) and mallards (Anas platyrhynchos) . Journal of General Virology , 86 : 1597 – 1607 .
  • Jungherr , E.L. , Chomiak , T.W. & Luginbuhl , R.E. 1956 . Immunologic differences in strains of infectious bronchitis . In Proceedings of the 60th Annual Meeting of the United States Livestock Sanitary Association (p. 203 ). Chicago, IL, USA .
  • Koci , M.D. , Seal , B.S. and Schultz-Cherry , S. 2000 . Molecular characterization of an avian astrovirus . Journal of Virology , 74 : 6173 – 6177 .
  • Krempl , C. , Ballesteros , M.L. , Zimmer , G. , Enjuanes , L. , Klenk , H.D. and Herrler , G. 2000 . Characterization of the sialic acid binding activity of transmissible gastroenteritis coronavirus by analysis of haemagglutination-deficient mutants . Journal of General Virology , 81 : 489 – 496 .
  • Kubo , H. , Yamada , Y.K. and Taguchi , F. 1994 . Localization of neutralizing epitopes and the receptor-binding site within the amino-terminal 330 amino acids of the murine coronavirus spike protein . Journal of Virology , 68 : 5403 – 5410 .
  • Kumar , S. , Nei , M. , Dudley , J. and Tamura , K. 2008 . MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences . Briefings in Bioinformatics , 9 : 299 – 306 .
  • Lin , T.L. , Loa , C.C. and Wu , C.C. 2004 . Complete sequences of 3'end coding region for structural protein genes of turkey coronavirus . Virus Research , 106 : 61 – 70 .
  • Liu , S. , Chen , J. , Kong , X. , Shao , Y. , Han , Z. Feng , L. 2005 . Isolation of avian infectious bronchitis coronavirus from domestic peafowl (Pavo cristatus) and teal (Anas) . Journal of General Virology , 86 : 719 – 725 .
  • Loa , C.C. , Lin , T.L. , Wu , C.C. , Bryan , T.A. , Thacker , H.L. , Hooper , T. and Schrader , D. 2000 . Detection of antibody to turkey coronavirus by antibody-capture enzyme-linked immunosorbent assay utilizing infectious bronchitis virus antigen . Avian Diseases , 44 : 498 – 506 .
  • Loa , C.C. , Wu , C.C. and Lin , T.L. 2006 . Comparison of 3’-end encoding regions of turkey coronavirus isolates from Indiana, North Carolina, and Minnesota with chicken infectious bronchitis coronavirus strains . Intervirology , 49 : 230 – 238 .
  • Masters , P.S. 2006 . The molecular biology of coronaviruses . Advances in Virus Research , 66 : 193 – 292 .
  • Meir , R. , Maharat , O. , Farnushi , Y. and Simanov , L. 2010 . Development of a real-time TaqMan RT-PCR assay for the detection of infectious bronchitis virus in chickens, and comparison of RT-PCR and virus isolation . Journal of Virological Methods , 163 : 190 – 194 .
  • Mihindukulasuriya , K.A. , Wu , G. , St Leger , J. , Nordhausen , R.W. and Wang , D. 2008 . Identification of a novel coronavirus from a beluga whale by using a panviral microarray . Journal of Virology , 82 : 5084 – 5088 .
  • Mondal , S.P. and Cardona , C.J. 2007 . Genotypic and phenotypic characterization of the California 99 (Cal99) variant of infectious bronchitis virus . Virus Genes , 34 : 327 – 341 .
  • Moreno Martin , A. , Vinco , L. , Cordioli , P. and Lavazza , A. 2002 . “ Diagnosis of turkey viral enteritic diseases by electron microscopy and identification of coronavirus in a case of turkey enteritis ” . In Proceedings of the 4th International Symposium on Turkey Diseases Edited by: Hafez , H.M. 114 Berlin, , Germany
  • Nagaraja , K.V. and Pomeroy , B.S. 1997 . “ Coronaviral enteritis of turkeys (bluecomb disease) ” . In Diseases of Poultry , 10th edn , Edited by: Calnek , B.W. , Barnes , H.J. , Beard , C.W. , McDougald , L.R. and Saif , Y.M. 686 – 692 . Ames : Iowa State University Press .
  • Pantin-Jackwood , M.J. , Day , J.M. , Jackwood , M.W. and Spackman , E. 2008a . Enteric viruses detected by molecular methods in commercial chicken and turkey flocks in the United States between 2005 and 2006 . Avian Diseases , 52 : 235 – 244 .
  • Pantin-Jackwood , M.J. , Spackman , E. and Day , J.M. 2008b . Pathogenesis of type 2 turkey astroviruses with variant capsid genes in 2-day-old specific pathogen free poults . Avian Pathology , 37 : 193 – 201 .
  • Parsons , D. , Ellis , M.M. , Cavanagh , D. and Cook , J.K. 1992 . Characterisation of an infectious bronchitis virus isolated from vaccinated broiler breeder flocks . Veterinary Record , 131 : 408 – 411 .
  • Picault , J.P. 1987 . Contribution à l'étude des coronaviroses dans l'espèce Gallus gallus en France . PhD Thesis, University Claude Bernard Lyon I, France (p. 162 ).
  • Picault , J.P. , Drouin , P. , Guittet , M. , Bennejean , G. , Protais , J. L'Hospitalier , R. 1986 . Isolation, characterisation and preliminary cross-protection studies with a new pathogenic avian infectious bronchitis virus (strain PL-84084) . Avian Pathology , 15 : 367 – 383 .
  • Picault , J.P. , Guittet , M. , Bennejean , G. , Drouin , P. , Lamandé , J. & Allée , C. 1988 . A pragmatic approach for the diagnosis of infectious bronchitis (IB) variant virus infections . In E.F. Kaleta & U. Heffels-Redmann Proceedings of the First International Symposium on Infectious Bronchitis 229 241 . Rauischholzhausen, West-Germany, 23–26 June 1988 .
  • Qian , D.H. , Zhu , G.J. , Wu , L.Z. and Hua , G.X. 2006 . Isolation and characterization of a coronavirus from pigeons with pancreatitis . The American Journal of Veterinary Research , 67 : 1575 – 1579 .
  • Reynolds , D.L. and Saif , Y.M. 1986 . Astrovirus: a cause of an enteric disease in turkey poults . Avian Diseases , 30 : 728 – 735 .
  • Rota , P.A. , Oberste , M.S. , Monroe , S.S. , Nix , W.A. , Campagnoli , R. Icenogle , J.P. 2003 . Characterization of a novel coronavirus associated with severe acute respiratory syndrome . Science , 300 : 1394 – 1399 .
  • Schultz-Cherry , S. , Kapczynski , D.R. , Simmons , V.M. , Koci , M.D. , Brown , C. and Barnes , H.J. 2000 . Identifying agent(s) associated with poult enteritis mortality syndrome: importance of the thymus . Avian Diseases , 44 : 256 – 265 .
  • Spackman , E. , Day , J.M. and Pantin-Jackwood , M.J. 2010 . Astrovirus, reovirus, and rotavirus concomitant infection causes decreased weight gain in broad-breasted white poults . Avian Diseases , 54 : 16 – 21 .
  • Tang , M. , Wang , H. , Zhou , S. and Tian , G. 2008 . Enhancement of the immunogenicity of an infectious bronchitis virus DNA vaccine by a bicistronic plasmid encoding nucleocapsid protein and interleukin-2 . Journal of Virological Methods , 149 : 42 – 48 .
  • Toquin , D. , Guionie , O. , Jestin , V. , Zwingelstein , F. , Allee , C. and Eterradossi , N. 2006 . European and American subgroup C isolates of avian metapneumovirus belong to different genetic lineages . Virus Genes , 32 : 97 – 103 .
  • Webster , R.G. , Bean , W.J. , Gorman , O.T. , Chambers , T.M. and Kawaoka , Y. 1992 . Evolution and ecology of influenza A viruses . Microbiological Reviews , 56 : 152 – 179 .
  • Winter , C. , Schwegmann-Wessels , C. , Neumann , U. and Herrler , G. 2008 . The spike protein of infectious bronchitis virus is retained intracellularly by a tyrosine motif . Journal of Virology , 82 : 2765 – 2771 .
  • Wong , S.K. , Li , W. , Moore , M.J. , Choe , H. and Farzan , M. 2004 . A 193-amino acid fragment of the SARS coronavirus S protein efficiently binds angiotensin-converting enzyme 2 . Journal of Biological Chemistry , 279 : 3197 – 3201 .
  • Woo , P.C. , Lau , S.K. , Lam , C.S. , Lai , K.K. , Huang , Y. Lee , P. 2009 . Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus . Journal of Virology , 83 : 908 – 917 .
  • Woolcock , P.R. and Shivaprasad , H.L. 2008 . Electron microscopic identification of viruses associated with poult enteritis in turkeys grown in California 1993–2003 . Avian Diseases , 52 : 209 – 213 .
  • Worthington , K.J. , Currie , R.J. and Jones , R.C. 2008 . A reverse transcriptase-polymerase chain reaction survey of infectious bronchitis virus genotypes in Western Europe from 2002 to 2006 . Avian Pathology , 37 : 247 – 257 .
  • Yamada , Y. and Liu , D.X. 2009 . Proteolytic activation of the spike protein at a novel RRRR/S motif is implicated in furin-dependent entry, syncytium formation, and infectivity of coronavirus infectious bronchitis virus in cultured cells . Journal of Virology , 83 : 8744 – 8758 .
  • Yu , M. , Ismail , M.M. , Qureshi , M.A. , Dearth , R.N. , Barnes , H.J. and Saif , Y.M. 2000 . Viral agents associated with poult enteritis and mortality syndrome: the role of a small round virus and a turkey coronavirus . Avian Diseases , 44 : 297 – 304 .
  • Zuniga , S. , Sola , I. , Alonso , S. and Enjuanes , L. 2004 . Sequence motifs involved in the regulation of discontinuous coronavirus subgenomic RNA synthesis . Journal of Virology , 78 : 980 – 994 .

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