Molecular characterization and pathogenicity of novel Malaysian chicken astrovirus isolates

References

• Arias, C.F. & Dubois, R.M. (2017). The astrovirus capsid: a review. Viruses, 9, 1–13.
   Web of Science ®Google Scholar
• Baxendale, W. & Mebatsion, T. (2004). The isolation and characterisation of astroviruses from chickens. Avian Pathology, 33, 364–370.
   PubMed Web of Science ®Google Scholar
• Bulbule, N.R., Mandakhalikar, K.D., Kapgate, S.S., Deshmukh, V.V., Schat, K.A. & Chawak, M.M. (2013). Role of chicken astrovirus as a causative agent of gout in commercial broilers in India. Avian Pathology, 42, 464–473.
   PubMed Web of Science ®Google Scholar
• David, F. (2020). White chick syndrome. In Y.M. Saif, D.E. Swayne, M.J. Pantin-Jackwood, E. Spackman, T.J. Johnson, J.M. Day, D. French, E. Gingerich, S.F. Bilgili, K. Jones, G. Boggan & M. Markis (Eds.). Diseases of Poultry 14th edn (pp. 1393–1395). Hoboken, NJ: John Willey & Sons, Inc.
   Google Scholar
• de Wit, J.J., ten Dam, G.B., vande Laar, J.M.A.M., Biermann, Y., Verstegen, I., Edens, F. & Schrier, C.C. (2011). Detection and characterization of a new astrovirus in chicken and turkeys with enteric and locomotion disorders. Avian Pathology, 40, 453–461.
   PubMed Web of Science ®Google Scholar
• Devaney, R., Trudgett, J., Trudgett, A., Meharg, C. & Smyth, V. (2016). A metagenomic comparison of endemic viruses from broiler chickens with runting-stunting syndrome and from normal birds. Avian Pathology, 45, 616–629.
   PubMed Web of Science ®Google Scholar
• Finkbeiner, S.R., Kirkwood, C.D. & Wang, D. (2008). Complete genome sequence of a highly divergent astrovirus isolated from a child with acute diarrhea. Virology Journal, 5, 117.
   PubMed Web of Science ®Google Scholar
• Fuentes, C., Bosch, A., Pintó, R.M. & Guix, S. (2012). Identification of human astrovirus genome-linked protein (VPg) essential for virus infectivity. Journal of Virology, 86, 10070–10078.
   PubMed Web of Science ®Google Scholar
• IndexBox. (2020). Global poultry production to reach 137M tonnes in 2020, mainly driven by growth in China, the EU, and the UK. Global Trade Magazine.
   Google Scholar
• Kang, G. & Gray, J.J. (2013). Astroviruses. In A. Magill, D. Hill, T. Solomon & T.B.T. Edward (Eds.). Hunter’s Tropical Medicine and Emerging Infectious Disease 9th edn (pp. 286–288). London: W.B. Saunders.
   Google Scholar
• Kang, K.I., El-gazzar, M., Sellers, H.S., Dorea, F., Williams, S.M., Kim, T., Collett, S. & Mundt, E. (2012a). Investigation into the aetiology of runting and stunting syndrome in chickens. Avian Pathology, 41, 41–50.
   PubMed Web of Science ®Google Scholar
• Kang, K.I., Icard, A.H., Linnemann, E., Sellers, H.S. & Mundt, E. (2012b). Determination of the full length sequence of a chicken astrovirus suggests a different replication mechanism. Virus Genes, 44, 45–50.
   PubMed Web of Science ®Google Scholar
• Kang, K.I., Linnemann, E., Icard, A.H., Durairaj, V., Mundt, E. & Sellers, H.S. (2018). Chicken astrovirus as an aetiological agent of runting-stunting syndrome in broiler chickens. Journal of General Virology, 99, 512–524.
   PubMed Web of Science ®Google Scholar
• Koci, M.D. & Schultz-Cherry, S. (2002). Avian astroviruses. Avian Pathology, 31, 213–227.
   PubMed Web of Science ®Google Scholar
• Krishna, N.K. (2005). Identification of structural domains involved in astrovirus capsid biology. Viral Immunology, 18, 17–26.
   PubMed Web of Science ®Google Scholar
• Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. (2018). MEGA x: molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution, 35, 1547–1549.
   PubMed Web of Science ®Google Scholar
• Long, K.E., Hastie, G.M., Ojkić, D. & Brash, M.L. (2017). Economic impacts of white chick syndrome in Ontario, Canada. Avian Diseases, 61, 402–408.
   PubMed Web of Science ®Google Scholar
• Mcneilly, F., Connor, T.J., Calvert, V.M., Smyth, J.A., Curran, W.L., Morley, A.J., Thompson, D., Singh, S., Mcferran, J.B., Adair, B.M. & McNulty, M.S. (1994). Studies on a new enterovirus-like virus isolated from chickens. Avian Pathology, 23, 313–327.
   PubMed Web of Science ®Google Scholar
• Méndez, E., Murillo, A., Velázquez, R., Burnham, A. & Arias, C.F. (2013). Replication cycle of astroviruses. In S. Schultz-Cherry (Ed.). Astrovirus Research Essential Ideas, Everyday Impacts, Future Directions 1st edn (pp. 19–46). New York: Springer.
   Google Scholar
• Monceyron, C., Grinde, B. & Jonassen, T. (1997). Molecular characterisation of the 3’-end of the astrovirus genome. Archives of Virology, 142, 699–706.
   PubMed Web of Science ®Google Scholar
• Nuñez, L.F.N, Parra, S.H., Mettifogo, E., Catroxo, M.H., Astolfi-Ferreira, C.S. & Piantino Ferreira, A.J.P. (2015). Isolation of chicken astrovirus from specific pathogen-free chicken embryonated eggs. Poultry Science, 94, 947–954.
   PubMed Web of Science ®Google Scholar
• Nuñez, L.F.N., Santander-Parra, S.H., Kyriakidis, N.C., Astolfi-Ferreira, C.S., Buim, M.R., De la Torre, D. & Ferreira, A.J.P. (2020). Molecular characterization and determination of relative cytokine expression in naturally infected day-old chicks with chicken astrovirus associated to white chick syndrome. Animals, 10, 1–18.
   Web of Science ®Google Scholar
• Palomino-Tapia, V., Mitevski, D., Inglis, T., van der Meer, F., Martin, E., Brash, M., Provost, C., Gagnon, C.A. & Abdul-Careem, M.F. (2020). Chicken astrovirus (CAstV) molecular studies reveal evidence of multiple past recombination events in sequences originated from clinical samples of white chick syndrome (WCS) in western Canada. Viruses, 12, 1–20.
   Web of Science ®Google Scholar
• Pantin-Jackwood, M.J., Spackman, E. & Woolcock, P.R. (2006). Molecular characterization and typing of chicken and Turkey astroviruses circulating in the United States: implications for diagnostics. Avian Diseases, 50, 397–404.
   PubMed Web of Science ®Google Scholar
• Pantin-Jackwood, M.J., Strother, K.O., Mundt, E., Zsak, L., Day, J.M. & Spackman, E. (2011). Molecular characterization of avian astroviruses. Archives of Virology, 156, 235–244.
   PubMed Web of Science ®Google Scholar
• Patel, A.K., Pandit, R.J., Thakkar, J.R., Hinsu, A.T., Pandey, V.C., Pal, J.K., Prajapati, K.S., Jakhesara, S.J. & Joshi, C.G. (2017). Complete genome sequence analysis of chicken astrovirus isolate from India. Veterinary Research Communications, 41, 67–75.
   PubMed Web of Science ®Google Scholar
• Raji, A.A., Omar, A.R., Ideris, A. & Bejo, M.H. (2019). Proceedings of the 31st Veterinary Association Malaysia (VAM) Congress (p. 41), Bangi, Malaysia.
   Google Scholar
• Sajewicz-Krukowska, J. & Domanska-Blicharz, K. (2016). Nearly full-length genome sequence of a novel astrovirus isolated from chickens with ‘white chicks’ condition. Archives of Virology, 161, 2581–2587.
   PubMed Web of Science ®Google Scholar
• Sajewicz-Krukowska, J., Pać, K., Lisowska, A., Pikuła, A., Minta, Z., Króliczewska, B. & Domańska-Blicharz, K. (2016). Astrovirus-induced “white chicks” condition – field observation, virus detection and preliminary characterization. Avian Pathology, 45, 2–12.
   PubMed Web of Science ®Google Scholar
• Smyth, V.J. (2017). A review of the strain diversity and pathogenesis of chicken astrovirus. Viruses, 9, 1–10.
   Web of Science ®Google Scholar
• Smyth, J.A., Connor, T.J., McNeilly, F., Moffet, D.A., Calvert, V.M. & McNulty, M.S. (2007). Studies on the pathogenicity of enterovirus-like viruses in chickens. Avian Pathology, 36, 119–126.
   PubMed Web of Science ®Google Scholar
• Smyth, V.J., Jewhurst, H.L., Adair, B.M. & Todd, D. (2009). Detection of chicken astrovirus by reverse transcriptase-polymerase chain reaction. Avian Pathology, 38, 293–299.
   PubMed Web of Science ®Google Scholar
• Smyth, V.J., Jewhurst, H.L., Wilkinson, D.S., Adair, B.M., Gordon, A.W. & Todd, D. (2010). Development and evaluation of real-time TaqMan® RT-PCR assays for the detection of avian nephritis virus and chicken astrovirus in chickens. Avian Pathology, 39, 467–474.
   PubMed Web of Science ®Google Scholar
• Smyth, V.J., Todd, D., Trudgett, J., Lee, A. & Welsh, M.D. (2012). Capsid protein sequence diversity of chicken astrovirus. Avian Pathology, 41, 151–159.
   PubMed Web of Science ®Google Scholar
• Smyth, V.J., Trudgett, J., Wylie, M., Jewhurst, H., Conway, B., Welsh, M., Kaukonen, E. & Perko-Mäkelä, P. (2013). Chicken astrovirus detected in hatchability problems associated with ‘white chicks’. Veterinary Record, 173, 403–404.
   PubMed Web of Science ®Google Scholar
• Xue, J., Han, T., Zhao, Y., Yang, H. & Zhang, G. (2020). Complete genome sequence and phylogenetic analysis of novel avastroviruses circulating in China from 2016 to 2018. Virus Research, 278, 197858.
   PubMed Web of Science ®Google Scholar
• Zhao, W., Wu, Z., Yao, Y., Qin, A. & Qian, K. (2020). The isolation and molecular characterization of an astrovirus from “Yellow” chickens, China. Frontiers in Veterinary Science, 7, 1–10.
   PubMed Web of Science ®Google Scholar