Diversity analysis of kinase like disease resistance gene analogues in sugarcane

References

• Afzal AJ, Wood AJ, Lightfoot DA. 2008. Plant receptor-like serine threonine kinases: roles in signaling and plant defense. Mol Plant Microbe Interact. 21(5):507–517.
   PubMed Web of Science ®Google Scholar
• Anderson CM, Wagner TA, Perret M, He ZH, He D, Kohorn BD. 2001. WAKs: cell wall-associated kinases linking the cytoplasm to the extracellular matrix. Plant Mol Biol. 47(1–2):197–206.
   PubMed Web of Science ®Google Scholar
• Bent AF, Kunkel BN, Dahlbeck D, Brown KL, Schmidt R, Giraudat J, Leung J, Staskawicz BJ. 1994. RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes. Sci. 265(5180):1856–1860.
   PubMed Web of Science ®Google Scholar
• Boller T, Felix G. 2009. A renaissance of elicitors: perception of microbe-associated molecular patterns and danger signals by pattern-recognition receptors. Annu Rev Plant Biol. 60:379–406.
   PubMed Web of Science ®Google Scholar
• Boschi F, Schvartzman C, Murchio S, Ferreira V, Siri MI, Galvan GA, Smoker M, Stransfeld L, Zipfel C, Vilaro FL, et al. 2017. Enhanced bacterial wilt resistance in potato through expression of Arabidopsis EFR and introgression of quantitative resistance from Solanum commersonii. Front Plant Sci. 8:1642.
   PubMed Web of Science ®Google Scholar
• Brutus A, Sicilia F, Macone A, Cervone F, De Lorenzo G. 2010. A domain swap approach reveals a role of the plant wall-associated kinase 1 (WAK1) as a receptor of oligogalacturonides. Proc Natl Acad Sci USA. 107(20):9452–9457.
   PubMed Web of Science ®Google Scholar
• Dangl JL, Horvath DM, Staskawicz BJ. 2013. Pivoting the plant immune system from dissection to deployment. Science. 341(6147):746–751.
   PubMed Web of Science ®Google Scholar
• Dardick C, Schwessinger B, Ronald P. 2012. Non-arginine-aspartate (non-RD) kinases are associated with innate immune receptors that recognize conserved microbial signatures. Curr Opin Plant Biol. 15(4):358–366.
   PubMed Web of Science ®Google Scholar
• de Jonge R, van Esse HP, Maruthachalam K, Bolton MD, Santhanam P, Saber MK, Zhang Z, Usami T, Lievens B, Subbarao KV, et al. 2012. Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing. Proc Natl Acad Sci USA. 109(13):5110–5115.
   PubMed Web of Science ®Google Scholar
• de Oliveira LFV, Christoff AP, de Lima JC, de Ross BCF, Sachetto-Martins G, Margis-Pinheiro M, Margis R. 2014. The wall-associated kinase gene family in rice genomes. Plant Sci. 229:181–192.
   PubMed Web of Science ®Google Scholar
• Delteil A, Gobbato E, Cayrol B, Estevan J, Michel-Romiti C, Dievart A, Kroj T, Morel JB. 2016. Several wall-associated kinases participate positively and negatively in basal defense against rice blast fungus. BMC Plant Biol. 16:17.
   PubMed Web of Science ®Google Scholar
• Diener AC, Ausubel FM. 2005. Resistance to Fusarium oxysporum 1, a dominant Arabidopsis disease-resistance gene, is not race specific. Genetics. 171(1):305–321.
   PubMed Web of Science ®Google Scholar
• Hu K, Cao J, Zhang J, Xia F, Ke Y, Zhang H, Xie W, Liu H, Cui Y, Cao Y, et al. 2017. Improvement of multiple agronomic traits by a disease resistance gene via cell wall reinforcement. Nat Plants. 3:17009.
   PubMed Web of Science ®Google Scholar
• Jones DA, Thomas CM, Hammond-Kosack KE, Balint-Kurti PJ, Jones JD. 1994. Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging. Science. 266(5186):789–793.
   PubMed Web of Science ®Google Scholar
• Jones JD, Dangl JL. 2006. The plant immune system. Nature. 444(7117):323–329.
   PubMed Web of Science ®Google Scholar
• Kohorn BD. 2016. Cell wall-associated kinases and pectin perception. J Exp Bot. 67(2):489–494.
   PubMed Web of Science ®Google Scholar
• Kunwar S, Iriarte F, Fan Q, Evaristo da Silva E, Ritchie L, Nguyen NS, Freeman JH, Stall RE, Jones JB, Minsavage GV, et al. 2018. L Transgenic expression of EFR and Bs2 genes for field management of bacterial wilt and bacterial spot of tomato. Phytopathology. 108(12):1402–1411.
   PubMed Web of Science ®Google Scholar
• Lacombe S, Rougon-Cardoso A, Sherwood E, Peeters N, Dahlbeck D, van Esse HP, Smoker M, Rallapalli G, Thomma BP, Staskawicz B, et al. 2010. Interfamily transfer of a plant pattern-recognition receptor confers broad-spectrum bacterial resistance. Nat Biotechnol. 28(4):365–369.
   PubMed Web of Science ®Google Scholar
• Li H, Zhou SY, Zhao WS, Su SH, Peng YL. 2009. A novel wall-associated receptor-like protein kinase gene, OsWAK1, plays important roles in rice blast disease resistance. Plant Mol Biol. 69(3):337–346.
   PubMed Web of Science ®Google Scholar
• Ron M, Avni A. 2004. The receptor for the fungal elicitor ethylene-inducing xylanase is a member of a resistance-like gene family in tomato. Plant Cell. 16(6):1604–1615.
   PubMed Web of Science ®Google Scholar
• Rosli HG, Zheng Y, Pombo MA, Zhong S, Bombarely A, Fei Z, Collmer A, Martin GB. 2013. Transcriptomics-based screen for genes induced by flagellin and repressed by pathogen effectors identifies a cell wall-associated kinase involved in plant immunity. Genome Biol. 14(12):R139.
   PubMed Web of Science ®Google Scholar
• Saintenac C, Lee WS, Cambon F, Rudd JJ, King RC, Marande W, Powers SJ, Berges H, Phillips AL, Uauy C, et al. 2018. Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici. Nat Genet. 50(3):368–374.
   PubMed Web of Science ®Google Scholar
• Shiu SH, Bleecker AB. 2001. Plant receptor-like kinase gene family: diversity, function, and signaling. Sci STKE. 2001(113):re22.
   PubMedGoogle Scholar
• Shrivastava AK, Srivastava S. 2016. Diversity of the germplasm of Saccharum species and related genera available for use in directed breeding programmes for sugarcane improvement. Curr Sci. 111(3):475–482.
   Web of Science ®Google Scholar
• Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, Lopez R, McWilliam H, Remmert M, Soding J, et al. 2011. Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol Syst Biol. 7:539.
   PubMed Web of Science ®Google Scholar
• Spoel SH, Dong X. 2012. How do plants achieve immunity? Defence without specialized immune cells. Nat Rev Immunol. 12(2):89–100.
   PubMed Web of Science ®Google Scholar
• Thomma BP, Nurnberger T, Joosten MH. 2011. Of PAMPs and effectors: the blurred PTI-ETI dichotomy. Plant Cell. 23(1):4–15.
   PubMed Web of Science ®Google Scholar
• Tripathi JN, Lorenzen J, Bahar O, Ronald P, Tripathi L. 2014. Transgenic expression of the rice Xa21 pattern-recognition receptor in banana (Musa sp.) confers resistance to Xanthomonas campestris pv. musacearum. Plant Biotechnol J. 12(6):663–673.
   PubMed Web of Science ®Google Scholar
• Upson JL, Zess EK, Białas A, Wu C-H, Kamoun S. 2018. The coming of age of EvoMPMI: evolutionary molecular plant-microbe interactions across multiple timescales. Curr Opin Plant Biol. 44:108–116.
   PubMed Web of Science ®Google Scholar
• Van den Ackerveken GF, Van Kan JA, De Wit PJ. 1992. Molecular analysis of the avirulence gene avr9 of the fungal tomato pathogen Cladosporium fulvum fully supports the gene-for-gene hypothesis. Plant J. 2(3):359–366.
   PubMed Web of Science ®Google Scholar
• Wang GL, Song WY, Ruan DL, Sideris S, Ronald PC. 1996. The cloned gene, Xa21, confers resistance to multiple Xanthomonas oryzae pv. oryzae isolates in transgenic plants. Mol Plant Microbe Interact. 9(9):850–855.
   PubMed Web of Science ®Google Scholar
• Yang P, Praz C, Li B, Singla J, Robert C, Kessel B, Scheuermann D, Lüthi L, Ouzunova M, Erb M, et al. 2019. Fungal resistance mediated by maize wall-associated kinase ZmWAK-RLK1 correlates with reduced benzoxazinoid content. New Phytol. 221(2):976–987.
   PubMed Web of Science ®Google Scholar