Detection of Escherichia coli in a cattle manure composting process by selective cultivation and colony polymerase chain reaction

References

• Haug , R. 1993 . The practical handbook of compost engineering , Chelsea, MI : Lewis Publishers .
   Google Scholar
• Sasaki , H. , Yano , H. , Sasaki , T. and Nakai , Y. 2005 . A survey of ammonia-assimilating micro-organisms in cattle manure composting . J. Appl. Microbiol. , 99 : 1356 – 1363 .
   Google Scholar
• Pagans , E. , Barrena , R. , Font , X. and Sánchez , A. 2006 . Ammonia emissions from the composting of different organic wastes . Dependency on process temperature. Chemosphere , 62 : 1534 – 1542 .
   Google Scholar
• Sasaki , H. , Kitazume , O. , Nonaka , J. , Hikosaka , K. , Otawa , K. , Itoh , K. and Nakai , Y. 2006 . Effect of a commercial microbiological additive on beef manure compost in the composting process . Anim. Sci. J. , 77 : 545 – 548 .
   Web of Science ®Google Scholar
• Borczyk , A. , Karmali , M. , Lior , H. and Duncan , L. 1987 . Bovine reservoir for verotoxin-producing Escherichia coli O157:H7 . Lancet , 1 : 98
   PubMed Web of Science ®Google Scholar
• Karmali , M. 1989 . Infection by Verocytotoxin-Producing Escherichia coli . Clin. Microbiol. Rev. , 2 : 15 – 38 .
   PubMed Web of Science ®Google Scholar
• Griffin , P. and Tauxe , R. 1991 . The epidemiology of infections caused by Escherichia coli O157:H7, other enterohemorrhagic E. coli, and the associated hemolytic uremic syndrome . Epidemiol. Rev. , 13 : 60 – 98 .
   PubMed Web of Science ®Google Scholar
• Jackson , S. , Goodbrand , R. , Johnson , R. , Odorico , V. , Alves , D. , Rahn , K. , Wilson , J. , Welch , M. and Khakhria , R. 1998 . Escherichia coli O157:H7 diarrhoea associated with well water and infected cattle on an Ontario farm . Epidemiol. Infect. , 120 : 17 – 20 .
   PubMed Web of Science ®Google Scholar
• Locking , M. , O'Brien , S. , Reilly , W. , Wright , E. , Campbell , D. , Coia , J. , Browning , L. and Ramsay , C. 2001 . Risk factors for sporadic cases ofEscherichia coli O157 infection: the importance of contact with animal excreta . Epidemiol. Infect. , 127 : 215 – 220 .
   Google Scholar
• Lung , A. , Lin , C. , Kim , J. , Marshall , M. , Nordstedt , R. , Thompson , N. and Wei , C. 2001 . Destruction of Escherichia coli O157:H7 and Salmonella enteritidis in cow manure composting . J. Food. Prot. , 64 : 1309 – 1314 .
   PubMed Web of Science ®Google Scholar
• Sivapalasingam , S. , Friedman , C. , Cohen , L. and Tauxe , R. 2004 . Fresh produce: a growing cause of outbreaks of foodborne illness in the United States, 1973 through 1997 . J. Food Prot. , 67 : 2342 – 2353 .
   PubMed Web of Science ®Google Scholar
• Doyle , M. and Erickson , M. 2008 . Summer meeting 2007 the problems with fresh produce: an overview . J. Appl. Microbiol. , 105 : 317 – 330 .
   PubMed Web of Science ®Google Scholar
• Jiang , X. , Morgan , J. and Doyle , M. 2003 . Fate of Escherichia coli O157:H7 during composting of bovine manure in a laboratory-scale bioreactor . J. Food Prot. , 66 : 25 – 30 .
   PubMed Web of Science ®Google Scholar
• Sidhu , J. , Gibbs , R. , Ho , G. and Unkovich , I. 1999 . Selection of Salmonella typhimurium as an indicator for pathogen regrowth potential in composted biosolids . Lett. Appl. Microbiol. , 29 : 303 – 307 .
   PubMed Web of Science ®Google Scholar
• Elving , J. , Ottoson , J. , Vinnerås , B. and Albihn , A. 2009 . Growth potential of faecal bacteria in simulated psychrophilic/mesophilic zones during composting of organic waste . J. Appl. Microbiol. , 108 : 1974 – 1981 .
   Google Scholar
• Kim , J. , Shepherd , M. J. and Jiang , X. 2009 . Evaluating the effect of environmental factors on pathogen regrowth in compost extract . Microb. Ecol. , 58 : 498 – 508 .
   Google Scholar
• Franke , S. , Harmsen , D. , Caprioli , A. , Pierard , D. , Wieler , L. and Karch , H. 1995 . Clonal relatedness of Shiga-like toxin-producing Escherichia coli O101 strains of human and porcine origin . J. Clin. Microbiol. , 33 : 3174 – 3178 .
   PubMed Web of Science ®Google Scholar
• Böhm , H. and Karch , H. 1992 . DNA fingerprinting of Escherichia coli O157:H7 strains by pulsed-field gel electrophoresis . J. Clin. Microbiol. , 30 : 2169 – 2172 .
   PubMed Web of Science ®Google Scholar
• Pradel , N. , Boukhors , K. , Bertin , Y. , Forestier , C. , Martin , C. and Livrelli , V. 2001 . Heterogeneity of Shiga toxin-producingEscherichia coli strains isolated from hemolytic-uremic syndrome patients, cattle, and food samples in central France . Appl. Environ. Microbiol. , 67 : 2460 – 2468 .
   PubMedGoogle Scholar
• Droffner , M. and Brinton , W. 1995 . Survival of E coli and Salmonella populations in aerobic thermophilic composts as measured with DNA gene probes . Zentralbl. Hyg. Umweltmed. , 197 : 387 – 397 .
   PubMedGoogle Scholar
• Kreader , C. 1996 . Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein . Appl. Environ. Microbiol. , 62 : 1102 – 1106 .
   PubMed Web of Science ®Google Scholar
• LaMontagne , M. , Michel , F. J. , Holden , P. and Reddy , C. 2002 . Evaluation of extraction and purification methods for obtaining PCR-amplifiable DNA from compost for microbial community analysis . J. Microbiol. Methods , 49 : 255 – 264 .
   PubMed Web of Science ®Google Scholar
• Otawa , K. , Sato , M. , Sasaki , T. , Sasaki , H. , Nonaka , J. and Nakai , Y. 2004 . Genetic analysis of Shiga-toxigenic Escherichia coli isolates from cattle in a limited region . Anim. Sci. J. , 75 : 261 – 269 .
   Google Scholar
• Wang , R. , Cao , W. and Cerniglia , C. 1996 . PCR detection and quantitation of predominant anaerobic bacteria in human and animal fecal samples . Appl. Environ. Microbiol. , 62 : 1242 – 1247 .
   PubMed Web of Science ®Google Scholar
• Candrian , U. , Furrer , B. , Höfelein , C. , Meyer , R. , Jermini , M. and Lüthy , J. 1991 . Detection of Escherichia coli and identification of enterotoxigenic strains by primer-directed enzymatic amplification of specific DNA sequences . Int. J. Food Microbiol. , 12 : 339 – 351 .
   PubMed Web of Science ®Google Scholar
• Meng , J. , Zhao , S. , Doyle , M. , Mitchell , S. and Kresovich , S. 1997 . A multiplex PCR for identifying Shiga-like toxin-producing Escherichia coli O157:H7 . Lett. Appl. Microbiol. , 24 : 172 – 176 .
   PubMed Web of Science ®Google Scholar
• Daiz , L. and Savage , G. 2007 . “ Factors that affect the process ” . In Compost Science and Technology , Edited by: Daiz , L. , Bertold , M. and Bidlingmaier , W. 49 – 66 . Oxford, , UK : Elsevier .
   Google Scholar
• Delaquis , P. , Bach , S. and Dinu , L. 2007 . Behavior of Escherichia coli O157:H7 in leafy vegetables . J. Food Prot. , 70 : 1966 – 1974 .
   PubMed Web of Science ®Google Scholar
• Beuchat , L. 2006 . Vectors and conditions for preharvest contamination of fruits and vegetables with pathogens capable of causing enteric diseases . Br. Food J. , 108 : 38 – 53 .
   Web of Science ®Google Scholar
• Rahn , K. , Renwick , S. , Johnson , R. , Wilson , J. , Clarke , R. , Alves , D. , McEwen , S. , Lior , H. and Spika , J. 1997 . Persistence ofEscherichia coli O157:H7 in dairy cattle and the dairy farm environment . Epidemiol. Infect. , 119 : 251 – 259 .
   PubMed Web of Science ®Google Scholar
• Cekmecelioglu , D. , Demirci , A. , Graves , R. and Davitt , N. 2005 . Optimization of windrow food waste composting to inactivate pathogenic microorganisms . American Society of Agricultural and Biological Engineers , 48 : 2023 – 2032 .
   Google Scholar
• Shepherd , M. J. , Liang , P. , Jiang , X. , Doyle , M. and Erickson , M. 2007 . Fate ofEscherichia coli O157:H7 during on-farm dairy manure-based composting . J. Food Prot. , 70 : 2708 – 2716 .
   PubMed Web of Science ®Google Scholar
• Artz , R. , Avery , L. , Jones , D. and Killham , K. 2006 . Potential pitfalls in the quantitative molecular detection of Escherichia coli O157:H7 in environmental matrices . Can. J. Microbiol. , 52 : 482 – 488 .
   PubMed Web of Science ®Google Scholar