In vitro and in vivo screening of bacterial species from contaminated soil for heavy metal biotransformation activity

References

• Zhang, W. J.; Jiang, F. B.; Ou, J. F. Global Pesticide Consumption and Pollution: With China as a Focus. Proc. Int. Acad. Ecol. Environ. Sci. 2011, 1, 125–144.
   Google Scholar
• Igiri, B. E.; Okoduwa, S. I.; Idoko, G. O.; Akabuogu, E. P.; Adeyi, A. O.; Ejiogu, I. K. Toxicity and Bioremediation of Heavy Metals Contaminated Ecosystem from Tannery Wastewater: A Review. J. Toxicol. 2018, 2018, 2568016–2568038. DOI: 10.1155/2018/.2568038
   Google Scholar
• Siddiquee, S.; Rovina, K.; Azad, S. A.; Naher, L.; Suryani, S.; Chaikaew, P. Heavy Metal Contaminants Removal from Wastewater Using the Potential Filamentous Fungi Biomass: A Review. J. Microb. Biochem. Technol. 2015, 07, 384–395. DOI: 10.4172/1948-5948.1000243.
   Google Scholar
• Arao, T.; Ishikawa, S.; Murakam, I. M.; Abe, K.; Maejima, Y.; Makino, T. Heavy Metal Contamination of Agricultural Soil and Countermeasures in Japan. Paddy Water Environ. 2010, 8, 247–257. DOI: 10.1007/s10333-010-0205-7.
   Web of Science ®Google Scholar
• Islam, E.; Khan, M. T.; Irem, S. Biochemical Mechanisms of Signaling: Perspectives in Plants under Arsenic Stress. Ecotoxicol. Environ. Saf. 2015, 114, 126–133. DOI: 10.1016/j.ecoenv.2015.01.017.
   PubMed Web of Science ®Google Scholar
• Poli, A.; Salerno, A.; Laezza, G.; Di Donato, P.; Dumontet, S.; Nicolaus, B. Heavy Metal Resistance of Some Thermophiles: Potential Use of α-Amylase from Anoxybacillus amylolyticus as a Microbial Enzymatic Bioassay. Res. Microbiol. 2009, 160, 99–106. DOI: 10.1016/j.resmic.2008.10.012.
   PubMed Web of Science ®Google Scholar
• Deepa, C. N.; Suresha, S. Biosorption of Lead (II) from Aqueous Solution and Industrial Effluent by Using Leaves of Araucaria Cookii: Application of Response Surface Methodology. IOSRJESTFT 2014, 8, 67–79. DOI: 10.9790/2402-08716779.
   Google Scholar
• Hrynkiewicz, K.; Baum, C. Application of Microorganisms in Environment Bioremediation from Heavy Metals. In Environmental Deterioration and Human Health, Springer, Dordrecht. 2014; pp. 215–227.
   Google Scholar
• Su, C. A Review on Heavy Metal Contamination in the Soil Worldwide: Situation, Impact and Remediation Techniques. Environ. Skept. Critics 2014, 3, 24.
   Google Scholar
• Okolo, N. V.; Olowolafe, E. A.; Akawu, I.; Okoduwa, S. I. R. Effects of Industrial Effluents on Soil Resources in Challawa Industrial Area, Kano, Nigeria. J. Glob. Ecol. Environ. 2016, 5, 1–10.
   Google Scholar
• Ferraz, P.; Fernanda Fidalgo, F.; Almeida, A.; Teixeira, J. Phytostabilization of Nickel by the Zinc and Cadmium Hyperaccumulator Solanum Nigrum L. Are Metallothioneins Involved? Plant Physiol. Biochem. 2012, 57, 254–260. DOI: 10.1016/j.plaphy.2012.05.025.
   PubMed Web of Science ®Google Scholar
• Yu, M. H. Impacts of Environmental Toxicants on Living Systems. Environmental Toxicology CRC Press LLC, Boca Raton, 2001; pp. 114–115.
   Google Scholar
• Rasmussen, L. D.; Sørensen, S. J.; Turner, R. R.; Barkay, T. Application of a Merlux Biosensor for Estimating Bioavailable Mercury in Soil. Soil Biology & Biochemistry 2000, 32, 639–646. DOI: 10.1016/S0038-0717(99)00190-X.
   Web of Science ®Google Scholar
• Gauthier, P. T.; Norwood, W. P.; Prepas, E. E.; Pyle, G. G. Metal–PAH Mixtures in the Aquatic Environment: A Review of co-Toxic Mechanisms Leading to More-than-Additive Outcomes. Aquat. Toxicol. 2014, 154, 253–269. DOI: 10.1016/j.aquatox.
   PubMed Web of Science ®Google Scholar
• Cervantes, C.; Campos-García, J.; Devars, S.; Gutiérrez Corona, F.; Loza-Tavera, H.; Torres-Guzmán, J. C.; Moreno-Sánchez, R. Interactions of Chromium with Microorganisms and Plants. FEMS Microbiol. Rev. 2001, 25, 335–347. DOI: 10.1111/j.1574-6976.00581.
   PubMed Web of Science ®Google Scholar
• Qazilbash, A. A. Isolation and Characterization of Heavy Metal Tolerant Biota from Industrially Polluted Soils and Their Role in Bioremediation. Biological Science 2004, 41, 210–256.
   Google Scholar
• Cánovas, D.; Cases, I.; de Lorenzo, V. Heavy Metal Tolerance and Metal Homeostasis in Pseudomonas putida as Revealed by Complete Genome Analysis. Environ. Microbiol. 2003, 5, 1242–1256. DOI: 10.1111/j.1462-2920.2003.00463.x.
   PubMed Web of Science ®Google Scholar
• Hu, N.; Luo, Y.; Song, J.; Wu, L.; Zhang, H. Influences of Soil Organic Matter, pH and Temperature on Pb Sorption by Four Soils in Yangtze River Delta. Acta Pedologica Sinica 2010, 47, 246–252.
   Google Scholar
• Pishchik, V.; Vorobyev, I.; Chernyaeva, S.; Timofeeva, A.; Kozhemyakov, A.; Alexeev, Y.; Lukin, S. Experimental and Mathematical Simulation of Plant Growth Promoting Rhizobacteria and Plant Interaction under Cadmium Stress. Plant and Soil 2002, 243, 173–186. DOI: 10.1023/A:1019941525758.
   Web of Science ®Google Scholar
• Ahirwar, N. K.; Gupta, G.; Singh, R.; Singh, V. Isolation, Identification and Characterization of Heavy Metal Resistant Bacteria from Industrial Affected Soil in Central India. Int. J. Pure App. Biosci 2016, 4, 88–93. DOI: 10.18782/2320-7051.2424.
   Google Scholar
• Malekzadeh, F.; Farazmand, A.; Ghafourian, H.; Shahamat, M.; Levin, M.; Colwell, R. R. Uranium Accumulation by a Bacterium Isolated from Electroplating Effluent. World J. Microbiol. Biotechnol. 2002, 18, 295–302. DOI: 10.1023/A:1015215718810.
   Web of Science ®Google Scholar
• Nobaharan, K.; Abtahi, A.; Asgari Lajayer, B.; van Hullebusch, E. D. Effects of Biochar Dose on Cadmium Accumulation in Spinach and Its Fractionation in a Calcareous Soil. Arab. J. Geosci. 2022, 15, 336. DOI: 10.1007/s12517-022-09608-z.
   Google Scholar
• Spermaceti, I.; Varma, A. Soil heavy metals. In Soil Biology, Springer nature: Germany, 2009; p. 19.
   Google Scholar
• Molalign, M. T.; Fikirte, Z. S.; Alemitu, I. I. Microbes Used as a Tool for Bioremediation of Heavy Metal from the Environment. Cogent Food Agricult. 2020, 6, 1–19. DOI: 10.1080/23311932.2020.1783174.
   Web of Science ®Google Scholar
• Mengoni, A.; Barabesi, C.; Gonnelli, C.; Galardi, F.; Gabbrielli, R.; Bazzicalupo, M. Genetic Diversity of Heavy Metal-Tolerant Populations in Silene Paradoxa L. (Caryophyllaceae): a Chloroplast Microsatellite Analysis. Mol. Ecol. 2001, 10, 1909–1916. DOI: 10.1046/j.0962-1083.2001.01336.x.
   PubMed Web of Science ®Google Scholar
• Chovanová, K.; Sládeková, D.; Kmet, V.; Proksova, M.; Harichová, J.; Puskarova, A.; Harichová, J.; Puškárová, A.; Polek, B.; Ferianc, P. Identification and Characterization of Eight Cadmium Resistant Bacterial Isolates from a Cadmium-Contaminated Sewage Sludge. Biologia 2004, 59, 817–827.
   Web of Science ®Google Scholar
• V.k, A.; Mishra, M.; Chowdhury, S.; Sudarshan, M.; Thakur, A. R.; Chaudhuri, S. R. Studies on Metal Microbe Interaction of Three Bacterial Isolates from East Calcutta Wetland. OnLine J. Biol. Sci. 2007, 7, 80–88. DOI: 10.3844/ojbsci.2007.80.88.
   Google Scholar
• Karelová, E.; Harichová, J.; Stojnev, T.; Pangallo, D.; Ferianc, P. The Isolation of Heavy-Metal Resistant Culturable Bacteria and Resistance Determinants from a Heavy-Metal-Contaminated site. Biologia 2011, 66, 18–26. DOI: 10.2478/s11756-010-0145-0.
   Web of Science ®Google Scholar
• Chang, J. S.; Hong, J. Biosorption of Mercury by the Inactivated Cells of Pseudomonas aeruginosa PU21 (Rip64). Biotechnol. Bioeng. 1994, 44, 999–1006. DOI: 10.1002/bit.260440817.
   PubMed Web of Science ®Google Scholar
• Palacios, O.; Leiva-Presa, A.; Atrian, S.; Lobinski, R. A Study of the Pb(II) Binding to Recombinant Mouse Zn7-Metallothionein 1 and Its Domains by ESI TOF MS. Talanta 2007, 72, 480–488. DOI: 10.1016/j.talanta.2006.11.009.
   PubMed Web of Science ®Google Scholar
• Kisielowska, E.; Hołda, A.; Niedoba, T. Removal of Heavy Metals from Coal Medium with Application of Biotechnological Methods. Górnictwo I Geoinzynieria 2010, 34, 93–104.
   Google Scholar
• Kręgiel, D.; Piątkiewicz, A.; Żakowska, Z.; Kunicka-Styczyńska, A. Zanieczyszczenia Mikrobiologiczne Surowców, (w:) Mikrobiologia Techniczna: Mikroorganizmy w Biotechnologii, Ochronie Środowiska i Produkcji Żywności, Libudzisz Z., Kowal K., Żakowska Z., Eds. PWN, Warszawa, 2008; pp. 235–252.
   Google Scholar
• Aiking, H.; Govers, H.; van ‘t Riet, J. Detoxification of Mercury, Cadmium, and Lead in Klebsiella aerogenes NCTC 418 Growing in Continuous Culture. Appl. Environ. Microbiol. 1985, 50, 1262–1267. DOI: 10.1128/aem.50.5.1262-1267.1985.
   PubMed Web of Science ®Google Scholar
• Jiang, C. Y.; Sheng, X. F.; Qian, M.; Wang, Q. Y. Isolation and Characterization of a Heavy Metal-Resistant Burkholderia sp. from Heavy Metal-Contaminated Paddy Field Soil and Its Potential in Promoting Plant Growth and Heavy Metal Accumulation in Metal-Polluted Soil. Chemosphere 2008, 72, 157–164. DOI: 10.1016/j.chemosphere.2008.02.006.
   PubMed Web of Science ®Google Scholar
• APHA Standard Methods for the Examination of Water and Wastewater. 21st Edition, American Public Health Association/American Water Works, Water Environment Federation, Washington DC, 2005.
   Google Scholar
• Zvyagintsev, D. G. Methods of Soil Microbiology and Biochemistry. MSU: Moscow, 1991; p. 303.
   Google Scholar
• Janssens, T. K. S.; Roelofs, D.; Van Straalen, N. M. Molecular Mechanisms of Heavy Metal Tolerance and Evolution in Invertebrates. Insect Sci. 2009, 16, 3–18. DOI: 10.1111/j.1744-7917.2009.00249.x.
   Web of Science ®Google Scholar
• Yilmaz, A. B. Levels of Heavy Metals (Fe, Cu, Ni, Cr, Pb, and Zn) in Tissue of Mugil Cephalus and Trachurus Mediterraneus from Iskenderun Bay, Turkey. Environ. Res. 2003, 92, 277–281. DOI: 10.1016/s0013-9351(02)00082-8.
   PubMed Web of Science ®Google Scholar
• Gadd, G. M. Bioremedial Potential of Microbial Mechanisms of Metal Mobilization and Immobilization. Curr. Opin. Biotechnol. 2000, 11, 271–279. DOI: 10.1016/s0958-1669(00)00095-1.
   PubMed Web of Science ®Google Scholar
• Gadd, G. M. Metals, Minerals and Microbes: Geomicrobiology and Bioremediation. Microbiology (Reading) 2010, 156, 609–643. DOI: 10.1099/mic.0.037143-0.
   PubMed Web of Science ®Google Scholar
• Lasat, M. M. Phytoextraction of Toxic Metals. J. of Env. Quality 2002, 31, 109–120. DOI: 10.2134/jeq2002.1090.
   PubMed Web of Science ®Google Scholar
• Khan, S.; Reid, B. J.; Li, G.; Zhu, Y. G. Application of Biochar to Soil Reduces Cancer Risk via Rice Consumption: A Case Study in Miaoqian Village, Longyan. China Environ. Interact. 2014, 68, 154–161. DOI: 10.1016/j.envint.
   PubMed Web of Science ®Google Scholar
• Pratush, A.; Kumar, A.; Hu, Z. Adverse Effect of Heavy Metals (as, Pb, Hg, and Cr) on Health and Their Bioremediation Strategies: A Review. Int. Microbiol. 2018, 21, 97–106. DOI: 10.1007/s10123-018-0012-3.
   PubMed Web of Science ®Google Scholar
• Chen, H.; Cutright, T. Preliminary Evaluation of Microbially Mediated Precipitation of Cadmium, Chromium, and Nickel by Rhizosphere Consortium. J. Environ. Eng. 2003, 129, 4–9. DOI: 10.1061/(ASCE)0733-9372(2003)129:1(4).
   Web of Science ®Google Scholar
• Lin, C. C.; Lin, H. L. Remediation of Soil Contaminated with the Heavy Metal (Cd2+). J. Hazard. Mater. 2005, 122, 7–15. DOI: 10.1016/j.jhazmat.2005.02.017.
   PubMed Web of Science ®Google Scholar
• Pande, V.; Pandey, S.; Sati, D.; Bhatt, P.; Samant, M. Microbial Interventions in Bioremediation of Heavy Metal Contaminants in Agroecosystem. Front. Microbiol. 2022, 13, 824084. DOI: 10.3389/fmicb.2022.824084.
   PubMed Web of Science ®Google Scholar
• Bhatietal, L.; Zhou, C.; Qin, K.; Tian, W.; Qi, C.; Yan, M.; Han, X. W. A Review on Heavy Metals Contamination in Soil: Effects, Sources, and Remediation Techniques. J. Soils Sediments 2019, 28, 380–394. DOI: 10.1080/15320383.2019.159210.
   Google Scholar
• Azubuike, C. C.; Chikere, C. B.; Okpokwasili, G. C. Bioremediation Techniques–Classification Based on Site of Application: Principles, Advantages, Limitations and Prospects. World J. Microbiol. Biotechnol. 2016, 32, 180.
   PubMed Web of Science ®Google Scholar
• Barkay, T.; Miller, S. M.; Summers, A. O. Bacterial Mercury Resistance from Atoms to Ecosystems. FEMS Microbiol. Rev. 2003, 27, 355–384. DOI: 10.1016/S0168-6445(03)00046-9.
   PubMed Web of Science ®Google Scholar
• Bentley, R.; Chasteen, T. G. Microbial Methylation of Metalloids: Arsenic, Antimony, and Bismuth. Microbiol. Mol. Biol. Rev. 2002, 66, 250–271. DOI: 10.1128/MMBR.66.2.250-271.2002.
   PubMed Web of Science ®Google Scholar
• Puyen, Z. M.; Villagrasa, E.; Maldonado, J.; Diestra, E.; Esteve, I.; Solé, A. Biosorption of Lead and Copper by Heavy-Metal Tolerant Micrococcus luteus DE 2008. Bioresour. Technol. 2012, 126, 233–237. DOI: 10.1016/j.biortech.2012.09.036.
   PubMed Web of Science ®Google Scholar
• Kumar, S.; Sharma, A. Cadmium Toxicity: Effects on Human Reproduction and Fertility. Rev. Environ. Health. 2019, 34, 327–338. DOI: 10.1515/reveh-2019-0016.
   PubMed Web of Science ®Google Scholar
• Jensen-Spaulding, A.; Shuler, M. L.; Lion, L. W. Mobilization of Adsorbed Copper and Lead from Naturally Aged Soil by Bacterial Extracellular Polymers. Water Res. 2004, 38, 1121–1128. DOI: 10.1016/j.watres.2003.11.015.
   PubMed Web of Science ®Google Scholar
• Roane, T. M. Lead Resistance in Two Bacterial Isolates from Heavy Metal–Contaminated Soils. Microb. Ecol. 1999, 37, 218–224. DOI: 10.1007/s002489900145.
   PubMed Web of Science ®Google Scholar
• Karataglis, S.; Moustakas, M.; Symeonidis, L. Effect of Heavy Metals on Isoperoxidases of Wheat. Biologia Plant. 1999, 33, 3–9. DOI: 10.1007/BF02873778.
   Google Scholar
• Vivas, A.; Azcón, R.; Biró, B.; Barea, J. M.; Ruiz-Lozano, J. M. Influence of Bacterial Strains Isolated from Lead-Polluted Soil and Their Interactions with Arbuscular Mycorrhizae on the Growth of Trifolium pratense L. under Lead Toxicity. Can. J. Microbiol. 2003, 49, 577–588. DOI: 10.1139/w03-073.
   PubMed Web of Science ®Google Scholar
• Bojórquez, C.; Frías-Espericueta, M. G.; Voltolina, D, Posgrado en Ciencias en Recursos Acuáticos, Universidad Autónoma de Sinaloa. Removal of Cadmium and Lead by Adapted Strains of Pseudomonas aeruginosa and Enterobacter cloacae. Rev. Int. Contam. Ambie 2016, 32, 407–412. DOI: 10.20937/RICA.2016.32.04.04.
   Web of Science ®Google Scholar
• Trellu, C.; Mousset, E.; Pechaud, Y.; Huguenot, D.; D van Hullebusch, E.; Esposito, G.; Oturan, M. Removal of Hydrophobic Organic Pollutants from Soil Washing/Flushing Solutions: A Critical Review. J. Hazard. Mater. 2016, 306, 149–174. DOI: 10.1016/j.jhazmat.2015.12.008.
   PubMed Web of Science ®Google Scholar
• Bissonnette, L.; St-Arnaud, M.; Labrecque, M. Phytoextraction of Heavy Metals by Two Salicaceae Clones in Symbiosis with Arbuscular Mycorrhizal Fungi during the Second Year of a Field Trial. Plant Soil 2010, 332, 55–67. DOI: 10.1007/s11104-009-0273-x.
   Web of Science ®Google Scholar
• Dixit, R.W.; Malaviya, D.; Pandiyan,K.; Singh,U.B.; Sahu,A.; Renu Shukla,R.; Bhanu P. Singh, B.P.; Jai P. Rai, J.P. Pawan Kumar Sharma, P.K., Lade,H.; Paul,D. Review Bioremediation of Heavy Metals from Soil and Aquatic Environment: An Overview of Principles and Criteria of Fundamental Processes. Sustainability. 2015, 7, 2189–2212; DOI: 10.3390/su7022189.
   Web of Science ®Google Scholar
• Carlot, M.; Giacomini, A.; Casella, S. Aspects of Plant-Microbe Interactions in Heavy Metal Polluted Soil. Acta Biotechnol. 2002, 22, 13–20. DOI: 10.1002/1521-3846(200205)22:1/2<13::AID-ABIO13>3.0.CO;2-9.
   Google Scholar
• Glick, B. R. Phytoremediation: Synergistic Use of Plants and Bacteria to Clean up the Environment. Biotechnol. Adv. 2003, 21, 383–393. DOI: 10.1016/s0734-9750(03)00055-7.
   PubMed Web of Science ®Google Scholar
• Dimkpa, C. O.; Svatos, A.; Dabrowska, P.; Schmidt, A.; Boland, W.; Kothe, E. Involvement of Siderophores in the Reduction of Metal-Induced Inhibition of Auxin Synthesis in Streptomyces Spp. Chemosphere 2008, 74, 19–25. DOI: 10.1016/j.chemosphere.2008.09.079.
   PubMed Web of Science ®Google Scholar
• Sinha, S.; Mukherjee, S. K. Cadmium-Induced Siderophore Production by a High Cd-Resistant Bacterial Strain Relieved Cd Toxicity in Plants through Root Colonization. Curr. Microbiol. 2008, 56, 55–60. DOI: 10.1007/s00284-007-9038-z.
   PubMed Web of Science ®Google Scholar
• Ali, H.; Khan, E.; Sajad, M. A. Phytoremediation of Heavy Metals—Concepts and Applications. Chemosphere 2013, 91, 869–881. DOI: 10.1016/j.chemosphere.2013.01.075.
   PubMed Web of Science ®Google Scholar
• Lovley, D. R. Cleaning up with Genomics: Applying Molecular Biology to Bioremediation. Nat. Rev. Microbiol. 2003, 1, 35–44. DOI: 10.1038/nrmicro731.
   PubMed Web of Science ®Google Scholar
• Sati, D.; Pande, V.; Pandey, S. C.; Samant, M. Recent Advances in PGPR and Molecular Mechanisms Involved in Drought Stress Resistance. J. Soil Sci. Plant Nutr. 2022, 23(1), 106–124. DOI: 10.1007/s42729-021-00724-5.
   PubMed Web of Science ®Google Scholar
• Sannasi, P.; Kader, J.; Othman, O.; Salmijah, S. Single and Multi-Metal Removal by an Environmental Mixed Bacterial Isolate. In Modern Multidisciplinary Applied Microbiology: Exploiting Microbes and Their Interaction; A. Mendez-Vilas, Eds. 2006; Wiley Online Library, pp. 136–141.
   Google Scholar
• Kader, J.; Sannasi, P.; Othman, O.; Ismail, B. S.; Salmijah, S. Removal of Cr (VI) from Aqueous Solutions by Growing and Non-Growing Populations of Environmental Bacterial Consortia. Global Environ. Res. 2007, 1, 12–17.
   Google Scholar
• De, J.; Ramaiah, N.; Vardanyan, L. Detoxification of Toxic Heavy Metals by Marine Bacteria Highly Resistant to Mercury. Mar. Biotechnol. (NY) 2008, 10, 471–477. DOI: 10.1007/s10126-008-9083-z.
   PubMed Web of Science ®Google Scholar
• Sepehri, S.; Kanani, E.; Abdoli, S.; Rajput, V. D.; Minkina, T.; Asgari Lajayer, B. Removal from Aqueous Solutions by Adsorption on Stabilized Zero-Valent Iron Nanoparticles—a Green Approach. Water 2023, 15, 222. DOI: 10.3390/w15020222.
   Web of Science ®Google Scholar