505
Views
20
CrossRef citations to date
0
Altmetric
FEATURE

How to Manage Data to Enhance Their Potential for Synthesis, Preservation, Sharing, and Reuse—A Great Lakes Case Study

Cómo manejar datos para incrementar el potencial para su síntesis, preservación, intercambio y reutilización –los Grandes Lagos como caso de estudio

, , , , , , , & show all
Pages 52-64 | Published online: 07 Feb 2013

REFERENCES

  • Akmon , D. , Zimmerman , A. , Daniels , M. and Hedstrom , M. 2011 . The application of archival concepts to a data-intensive environment: working with scientists to understand data management and preservation needs . Archival Science , 11 : 1 – 20 .
  • Baker , K. S. , Benson , B. J. , Henshaw , D. L. , Blodgett , D. , Porter , J. H. and Stafford , S. G. 2000 . Evolution of a multisite network information system: the LTER information management paradigm . Bioscience , 50 ( 11 ) : 963 – 978 .
  • Baker , K. S. and Bowker , G. C. 2007 . Information ecology: open system environment for data, memories and knowing . Journal of Intelligent Information Systems , 29 : 127 – 144 .
  • Baker , K. S. , Jackson , S. J. and Wanetick , J. R. 2005 . “ Strategies supporting heterogeneous data and interdisciplinary collaboration: towards an ocean informatics environment ” . In Proceedings of the 38th Hawaii International Conference on System Sciences , 1 – 10 . Big Island , Hawaii : IEEE . (HICSS) 2005, 3–6 January, New Brunswick, New Jersey
  • Baker , K. S. and Stocks , K. I. 2007 . “ Building environmental information systems: myths and interdisciplinary lessons ” . In System Sciences, 2007 , 253b – 253b . New Brunswick , New Jersey : IEEE . Hawaii International Conference on System Sciences (HICSS) 2007
  • Barnas , K. and Katz , S. L. 2010 . The challenges of tracking habitat at various spatial scales . Fisheries , 35 ( 5 ) : 232 – 241 .
  • Beard , D. T. , Austen , D. , Brady , S. J. , Costello , M. E. , Drewes , H. G. , Young-Dubovsky , C. H. , Flather , C. H. , Gengerke , C. L. , Loftus , A. J. and Mac , M. J. 1998 . The multi-state aquatic resources information system . Fisheries , 18 ( 2 ) : 14 – 18 .
  • Birnholtz , J. P. and Bietz , M. J. 2003 . Data at work: supporting sharing in science and engineering . Proceedings of the 2003 International ACM SIGGROUP Conference on Supporting Group Work, Sanibel Island, Florida , 9 ( 12 ) : 339 – 348 .
  • Blukacz , E. A. , Koops , M. A. , Sutton , T. M. , Arts , M. T. , Fitzsimmons , J. D. , Muir , A. M. , Claramunt , R. M. , Johnson , T. B. , Kinnunen , R. E. , Ebner , M. P. , Suski , C. and Burness , G. 2010 . Linking Lake Whitefish (Coregonus clupeaformis) condition with male gamete quality and quantity . Journal of Great Lakes Research , 36 ( 1 ) : 78 – 83 .
  • Blumenthal , D. , Campbell , E. G. , Anderson , M. S. , Causino , N. and Seashore , K. S. 1997 . Withholding research results in academic life science: evidence from a national survey . Journal of American Medical Association , 277 ( 15 ) : 1224 – 1228 .
  • Blumenthal , D. , Campbell , E. G. , Gokhale , M. , Yucel , R. , Clarridge , B. , Hilgartner , S. and Holtzman , N. A. 2006 . Data withholding in genetics and other life sciences: prevalences and predictors . Academic Medicine , 81 ( 2 ) : 137 – 145 .
  • Borer , E. T. , Seabloom , E. W. , Jones , M. B. and Schildhauer , M. 2009 . Some simple guidelines for effective data management . Bulletin of the Ecological Society of America , 90 ( 2 ) : 205 – 214 .
  • Borgman , C. L. 2010 . Research data: who will share what, with whom, when, and why? Paper presented at the China-North America Library Conference, Beijing, China
  • Borgman , C. L. , Wallis , J. C. and Enyedy , N. 2006 . Building digital libraries for scientific data: an exploratory study of data practices in habitat ecology Paper presented at the 10th European Conference on Research and Advanced Technology for Digital Libraries, September 17–22, Alicante, Spain
  • Borgman , C. L. , Wallis , J. C. and Enyedy , N. 2007 . Little science confronts the data deluge: habitat ecology, embedded sensor networks and digital libraries . International Journal of Digital Libraries , 7 ( 1–2 ) : 17 – 30 .
  • Brenden , T. O. , Ebner , M. P. and Sutton , T. M. 2010 . Special Issue on Assessing the Health of Lake Whitefish Populations in the Laurentian Great Lakes . Journal of Great Lakes Research , 36 ( 1 ) : 1 – 142 .
  • Brunt , J. W. 1994 . “ Research data management in ecology: a practical approach for long-term projects ” . In Seventh International Working Conference Scientific and Statistical Database Management , Edited by: French , J. C. and Hinterberger , H. 272 – 275 . Washington , DC : IEEE Computer Society Press .
  • Brunt , J. W. and Michener , W. K. 2009 . The resource discovery initiative for field stations: enhancing data management at North American biological field stations . Bioscience , 59 ( 6 ) : 482 – 487 .
  • Campbell , E. G. , Clarridge , B. R. , Gokhale , M. , Birenbaum , L. , Hilgartner , S. , Holtzman , N. A. and Blumenthal , D. 2002 . Data withholding in academic genetics: evidence from a national survey . Journal of the American Medical Association , 287 ( 4 ) : 473 – 479 .
  • Carlson , S. and Anderson , B. 2007 . What are data? The many kinds of data and their implications for re-use . Journal of Computer-Mediated Communication , 12 ( 2 ) : 635 – 650 .
  • Carpenter , S. R. , Mooney , H. A. , Agard , J. , Capistrano , D. , DeFries , R. S. , Díaz , S. , Dietz , T. , Duraiappah , A. K. , Oteng-Yeboah , A. , Pereira , H. M. , Perrings , C. , Reid , W. V. , Sarukhan , J. , Scholes , R. J. and Whyte , A. 2009 . Science for managing ecosystem services: beyond the Millennium Ecosystem Assessment . Proceedings from the National Academy of Sciences , 106 ( 5 ) : 1305 – 1312 .
  • Claramunt , R. M. , Muir , A. M. , Johnson , J. and Sutton , T. M. 2010a . Spatio-temporal trends in the food habits of age-0 Lake Whitefish . Journal of Great Lakes Research , 36 ( 1 ) : 66 – 72 .
  • Claramunt , R. M. , Muir , A. M. , Sutton , T. M. , Peeters , P. J. , Ebner , M. P. , Fizsimons , J. D. and Koops , M. A. 2010b . Measures of larval Lake Whitefish length and abundance as early predictors of year-class strength in Lake Michigan . Journal of Great Lakes Research , 36 ( 1 ) : 84 – 91 .
  • Costello , M. J. 2009 . Motivating online publication of data . Bioscience , 59 ( 5 ) : 418 – 427 .
  • Cragin , M. H. , Palmer , C. L. , Carlson , J. R. and Witt , M. 2010 . Data sharing, small science and institutional repositories . Philosophical Transactions of the Royal Society , 368 : 4023 – 4038 .
  • Cragin , M. H. , Palmer , C. L. and Chao , T. C. 2008 . Relating data practices, types, and curation functions: an empirically derived framework . Proceedings of the American Society for Information Science and Technology , 47 ( 1 ) : 1 – 2 .
  • Fagan , K. A. , Koops , M. A. , Arts , M. T. and Power , M. 2011 . Assessing the utility of C:N ratios for predicting lipid content in fishes . Canadian Journal of Fisheries and Aquatic Sciences , 68 : 378 – 385 .
  • Fagan , K. A. , Koops , M. A. , Arts , M. T. , Sutton , T. M. and Power , M. 2012 . Lake Whitefish feeding habits and condition in Lake Michigan . Advances in Limnology , 63 : 399 – 415 .
  • Federal Geographic Data Committed . 1998 . FGDC-STD-001-1998. Content standard for digital geospatial metadata (revised June 1998) , Washington , DC : Federal Geographic Data Committee . Available: http://[email protected]. (January, 2013)
  • Fishbein , E. A. 1991 . Ownership of research data . Journal of Academic Medicine , 66 ( 3 ) : 129 – 133 .
  • Freedom of Information Act (FOIA) . 5 United States Code, Section 552 Department of Defense Publication 5400.7, Part 286 of Chapter 32. Code of Federal Regulations
  • Frimpong , E. A. and Angermeir , P. L. 2009 . Fish traits: a database of ecological and life history traits of freshwater fishes of the United States . Fisheries , 34 ( 10 ) : 487 – 495 .
  • Guttmacher , A. E. , Nabel , E. G. and Collins , F. S. 2009 . Why data-sharing policies matter . Proceedings of the National Academy of Sciences , 106 ( 40 ) : 168 – 194 .
  • Haas , M. R. 2011 . To share or not to share? Professional norms, reference groups, and information withholding among life scientists . Organization Science , 21 ( 4 ) : 873 – 891 .
  • Haerder , T. and Reuter , A. 1983 . Principles of transaction-oriented database recovery . ACM Computing Surveys , 15 ( 4 ) : 287 – 317 .
  • Hale , S. S. , Miglarese , A. H. , Bradley , M. P. , Belton , T. J. , Cooper , L. D. , Frame , M. T. , Friel , C. A. , Harwell , L. M. , King , R. E. , Michner , W. K. , Nicolson , D. T. and Peterjohn , B. G. 2003 . Managing troubled data: coastal data partnerships smooth data integration . Environmental Monitoring and Assessment , 81 : 133 – 148 .
  • Heidorn , P. B. 2008 . Shedding light on the dark data in the long tail of science . Library Trends , 57 : 280 – 299 .
  • Hernandez , M. J. 2003 . Database design for mere mortals: a hand's on guide to relational database design , New York : Addison-Wesley .
  • Hook , L. A. , Vannan , S. K. S. , Beaty , T. W. , Cook , R. B. and Wilson , B. E. 2010 . Best practices for preparing environmental datasets to share and archive , Oak Ridge , Tennessee : Oak Ridge National Laboratory Distributed Active Archive Center .
  • International Organization for Standardization . 2011 . Certification for high standards of quality management, ISO 9001:2011 , Geneva , , Switzerland : International Organization for Standardization .
  • Katz , S. L. , Barnas , K. , Hicks , R. , Cowan , J. and Jenkinson , R. 2007 . Freshwater habitat restoration actions in the Pacific Northwest: a decade's investment in habitat improvement . Restoration Ecology , 15 ( 3 ) : 494 – 505 .
  • Kelling , S. , Hochachka , W. , Fink , D. , Riedewald , M. and Caruana , R. 2009 . Data-intensive science: a new paradigm for biodiversity studies . Bioscience , 59 ( 7 ) : 613 – 620 .
  • Lélé , S. and Norgaard , R. B. 2005 . Practicing interdisciplinarity . Bioscience , 55 ( 11 ) : 967 – 975 .
  • Ling Liu , M. and Özsu , T. , eds. 2009 . Encyclopedia of database systems , New York : Springer .
  • Lord , P. , Macdonald , A. , Lyon , L. and Giarretta , D. 2004 . “ From data deluge to data curation ” . In Proceedings of the UK e-Science All Hands Meeting. (MARIS) The Multistate Aquatic Resource Information System. 2008 371 – 357 . About MARIS. Available: http://www.marisdata.org. (January, 2013)
  • McDade , L. A. , Maddison , D. R. , Guralick , R. , Piowar , H. A. , Jameson , M. L. , Helgen , K. M. , Herendeen , P. S. , Hill , A. and Vis , M. L. 2011 . Biology needs a modern assessment system for professional productivity . Bioscience , 61 : 619 – 625 .
  • McDonald , L. L. , Bilby , R. , Bisson , P. A. , Coutant , C. C. , Epifanio , J. M. , Goodman , D. , Hanna , S. , Huntly , N. , Merrill , E. , Riddell , B. , Liss , W. , Loudenslager , E. J. , Phillipp , D. P. , Smoker , W. , Whitney , R. R. and Williams , R. N. 2007 . Research, monitoring, and evaluation of fish and wildlife restoration projects in the Columbia River Basin . Fisheries , 32 ( 12 ) : 582 – 590 .
  • McLaughlin , R. L. , Carl , L. M. , Middel , T. , Ross , M. , Noakes , D. L. G. , Hayes , D. B. and Baylis , J. R. 2001 . Potentials and pitfalls of integrating data from diverse sources: lessons from a historical database for Great Lakes stream fisheries . Fisheries , 26 ( 7 ) : 14 – 23 .
  • McLaughlin , R. L. , Jones , M. L. , Mandrak , N. E. and Stacey , D. 2010 . FishMAP online: a web application supporting science-based decisions concerning fish movement and passage , Ann Arbor , Michigan : Great Lakes Fishery Commission .
  • Michener , W. K. , Allard , S. , Budden , A. , Cook , R. B. , Douglass , K. , Frame , M. , Kelling , S. , Koskela , R. , Tenopir , C. and Vieglai , D. A. 2012 . Participatory design of DataONE—enabling cyberinfrastructure for the biological and environmental sciences . Ecological Informatics , 11 : 5 – 15 .
  • Michener , W. K. and Jones , M. B. 2011 . Ecoinformatics: supporting ecology as a data intensive science . Trends in Ecology and Evolution , 27 ( 2 ) : 85 – 93 .
  • Muir , A. M. , Sutton , T. M. , Arts , M. T. , Claramunt , R. M. , Ebner , M. P. , Fitzsimons , J. D. , Johnson , T. B. , Kinnunen , R. E. , Koops , M. A. and Sepúlveda , M. M. 2010 . Does condition of Lake Whitefish spawners affect physiological condition of juveniles? . Journal of Great Lakes Research , 36 ( 1 ) : 92 – 99 .
  • National Institutes of Health . 2003 . Data sharing policy and implementation guidance Available: http://grants.nih.gov/grants/policy/data_sharing/data_sharing_guidance.htm. (January, 2013)
  • National Science Foundation . 2010 . Dissemination and Sharing of Research Results Available: http://www.nsf.gov/bfa/dias/policy/dmp.jsp. (January, 2013)
  • Nelson , B. 2009 . Data sharing: empty archives . Nature , 461 ( 7261 ) : 160 – 163 .
  • Newman , H. B. , Ellisman , M. H. and Orcutt , J. A. 2003 . Data intensive e-science frontier research . Communications of the ACM , 46 ( 11 ) : 68 – 77 .
  • (NOAA) National Oceanic and Atmospheric Administration Fisheries Service . 2010 . Data and information management policy directive Available: http://www.nmfs.noaa.gov/op/pds/documents/04/04-111.pdf. (January, 2013)
  • (NOAA) National Oceanic and Atmospheric Administration Fisheries Service . 2011 . Information and data administration policy Available: http://ias.pifsc.noaa.gov/lds/docs/DMPolicyDraft1008.doc. (January, 2013)
  • (NOAA) National Oceanic and Atmospheric Administration Fisheries Service . 2012 . Data citation guidelines Available: https://www.nosc.noaa.gov/EDMC/documents/edmcon/2012_breakout_sessions/Duerr-ESIP_Data_Citation_Guidelines.pdf. (January, 2013)
  • (NOAA) National Oceanic and Atmospheric Administration Fisheries Service . 2007 . Open sourcing ecological data . Bioscience , 57 ( 4 ) : 309 – 310 .
  • Porter , J. H. and Ramsey , K. W. 2002 . “ Integrating ecological data: tools and techniques ” . In Proceedings of the 6th World Multi-Conference on Systematics , Edited by: Callaos , N. , Porter , J. and Rishe , N. 396 – 401 . Orlando , Florida : Cybernetics and Informatics .
  • Postel , B. R. , Shapiro , L. A. and Biesanz , J. C. 2002 . On having one's data shared . Journal of Cognitive Neuroscience , 14 ( 6 ) : 838 – 840 .
  • Pratt , P. J. and Adamski , J. J. 2007 . Concepts of database management , 4th edition , Boston : Massachusetts .
  • R Development Core Team . 2011 . R: a language environment for statistical computing , Vienna, Austria : R Foundation for Statistical Computing . Available: http://www.R-project.org. (January, 2013)
  • (RIN) Research Information Network . 2008 . To share or not to share: publication and quality assurance or research data outputs Available: http://eprints.soton.ac.uk/266742/1/Published_report_-_main_-_final.pdf. (January, 2013)
  • Sutton , T. M. , Koops , M. A. , Arts , M. T. , Muir , A. M. , Blukacz , A. E. , Claramunt , R. M. , Ebener , M. P. , Fitzsimons , J. D. , Johnson , T. B. and Kinnunen , R. E. 2007 . Project completion report: does adult body condition affect recruitment potential in Lake Whitefish (Coregonus clupeaformis)? , Lansing , Michigan : Great Lakes Fishery Trust .
  • Tenopir , C. , Allard , S. , Douglas , K. , Aydinoglu , A. U. , Wu , L. , Read , E. , Manoff , M. and Frame , M. 2011 . Data sharing by scientists: practices and perceptions . PLoS ONE , 6 ( 6 ) : 1 – 21 .
  • Uhlir , P. 2010 . Information gulags, intellectual straightjackets, and memory holes: three principles to guide the preservation of scientific data . Data Science Journal , 7 : ES1 – ES5 .
  • U.S. Fish and Wildlife Service . 2006 . Department of Interior—departmental manual, part 378: data resource management Available: http://www.fws.gov/policy/274fw1.html. (January, 2013)
  • Van den Eynden , V. , Corti , L. , Woollard , M. , Bishop , L. and Horton , L. 2011 . Managing and sharing data—best practice for researchers , Colchester , , UK : UK Data Archive, University of Essex .
  • Vogeli , C. , Recai , Y. , Bendavid , E. , Jones , L. M. , Anderson , M. S. , Louis , K. S. and Campbell , E. G. 2006 . Data withholding and the next generation of scientists: results of a national survey . Academic Medicine , 81 ( 2 ) : 128 – 136 .
  • Wake , M. H. 2008 . Integrative biology: science for the 21st century . Bioscience , 58 ( 4 ) : 224 – 232 .
  • Wallis , J. C. , Borgman , C. L. , Mayernik , M. and Pepe , A. 2008 . Moving archival practices upstream: an exploration of the life cycle of ecological sensing data in collaborative field research . International Journal of Digital Curation , 3 ( 1 ) : 114 – 126 .
  • Wang , L. , Infante , D. , Esselman , P. , Cooper , A. , Wu , D. , Taylor , W. W. , Beard , D. , Whelan , G. and Ostroff , A. 2011 . A hierarchical spatial framework and database for the National River Fish Habitat Condition Assessment . Fisheries , 36 ( 9 ) : 436 – 449 .
  • Watson , R. and Kura , R. Y. 2006 . Fishing gear associated with global marine catches: database development . Fisheries Research , 79 : 97 – 102 .
  • Whiteed , D. C. , Kimball , J. S. , Lucotch , J. A. , Manmenee , N. K. , Wu , H. , Chilcote , S. D. and Stanford , J. A. 2012 . A riverscape analysis tool developed to assist wild salmon conservation across the North Pacific Rim . Fisheries , 37 ( 7 ) : 305 – 314 .
  • Whitlock , M. C. 2011 . Data archiving in ecology and evolution: best practices . Trends in Ecology and Evolution , 26 ( 2 ) : 61 – 65 .
  • Witt , M. 2009 . Institutional repositories and research data curation in a distributed environment . Library Trends , 57 : 191 – 201 .
  • Witt , M. , Carlson , J. and Brandt , S. 2009 . Constructing data curation profiles . International Journal of Digital Curation , 3 ( 4 ) : 93 – 103 .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.