Conservation tillage increased soil bacterial diversity and improved soil nutrient status on the Loess Plateau in China

References

• Abu-Hamdeh NH, Ismail SM, Al-Solaimani SG, Hatamleh RI. 2019. Effect of tillage systems and polyacrylamide on soil physical properties and wheat grain yield in arid regions differing in fine soil particles. Arch Agron Soil Sci. 65:182–196. doi:10.1080/03650340.2018.1492114.
   Web of Science ®Google Scholar
• Alekhina LK, Dobrovol’skaya TG, Pochatkova TN, Zvyagintsev DG. 2001. Evaluation of bacterial diversity in soil microcosms at different moisture contents. Microbiology 70:731–737. doi:10.1023/a:1013100218465.
   Web of Science ®Google Scholar
• Arshad A, Martins PD, Frank J, Jetten MSM, Den Camp HJMO, Welte CU. 2017. Mimicking microbial interactions under nitrate-reducing conditions in an anoxic bioreactor: enrichment of novel Nitrospirae bacteria distantly related to thermodesulfovibrio. Environ Microbiol. 19:4965–4977. doi:10.1111/1462-2920.13977.
   PubMed Web of Science ®Google Scholar
• Aslam Z, Yasir M, Yoon HS, Jeon CO, Chung YR. 2013. Diversity of the bacterial community in the rice rhizosphere managed under conventional and no-tillage practices. J Microbiol. 51:747–756. doi:10.1007/s12275-013-2528-8.
   PubMed Web of Science ®Google Scholar
• Bao S. 2008. Soil agrochemical analysis. 3rd ed. Beijing China: China agriculture press.
   Google Scholar
• Blanco-Canqui H, Ruis SJ. 2018. No-tillage and soil physical environment. Geoderma 326:164–200. doi:10.1016/j.geoderma.2018.03.011.
   Web of Science ®Google Scholar
• Blevins RL, Frye WW. 1993. Conservation tillage: an ecological approach to soil management. Adv Agron. 51:33–78. doi:10.1016/s0065-2113(08)60590-8.
   Web of Science ®Google Scholar
• Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI, et al. 2010. QIIME allows analysis of high-throughput community sequencing data. Nat Methods. 7:335–336. doi:10.1038/nmeth.f.303.
   PubMed Web of Science ®Google Scholar
• Ceja-Navarro JA, Rivera-Orduna FN, Patino-Zuniga L, Vila-Sanjurjo A, Crossa J, Govaerts B, Dendooven L. 2010. Phylogenetic and multivariate analyses to determine the effects of different tillage and residue management practices on soil bacterial communities. Appl Environ Microbiol. 76:3685–3691. doi:10.1128/aem.02726-09.
   PubMed Web of Science ®Google Scholar
• Chao A, Lee SM. 1992. Estimating the number of classes via sample coverage. J Am Stat Assoc. 87:210–217. doi:10.2307/2290471.
   Web of Science ®Google Scholar
• Chaudhry V, Sharma S, Bansal K, Patil PB. 2016. Glimpse into the genomes of rice endophytic bacteria: diversity and distribution of Firmicutes. Front Microbiol. 7:2115. doi:10.3389/fmicb.2016.02115.
   PubMed Web of Science ®Google Scholar
• Chinnadurai C, Gopalaswamy G, Balachandar D. 2014. Long term effects of nutrient management regimes on abundance of bacterial genes and soil biochemical processes for fertility sustainability in a semi-arid tropical alfisol. Geoderma. 232:563-572. doi:10.1016/j.geoderma.2014.06.015
   Web of Science ®Google Scholar
• Colombo F, Macdonald CA, Jeffries TC, Powell JR, Singh BK. 2016. Impact of forest management practices on soil bacterial diversity and consequences for soil processes. Soil Biol Biochem. 94:200–210. doi:10.1016/j.soilbio.2015.11.029.
   Web of Science ®Google Scholar
• Degrune F, Theodorakopoulos N, Dufrene M, Colinet G, Bodson B, Hiel MP, Taminiau B, Nezer C, Daube G, Vandenbol M. 2016. No favorable effect of reduced tillage on microbial community diversity in a silty loam soil (Belgium). Agr Ecosyst Environ. 224:12–21. doi:10.1016/j.agee.2016.03.017.
   Web of Science ®Google Scholar
• Delgado-Baquerizo M, Oliverio AM, Brewer TE, Benavent-Gonzalez A, Eldridge DJ, Bardgett RD, Maestre FT, Singh BK, Fierer N. 2018. A global atlas of the dominant bacteria found in soil. Science 359:320-+. doi:10.1126/science.aap9516.
   PubMed Web of Science ®Google Scholar
• Dong W, Liu E, Yan C, Tian J, Zhang H, Zhang Y. 2017. Impact of no tillage vs. conventional tillage on the soil bacterial community structure in a winter wheat cropping succession in northern China. Eur J Soil Biol. 80:35–42. doi:10.1016/j.ejsobi.2017.03.001.
   Web of Science ®Google Scholar
• Du Z, Han X, Wang Y, Gu R, Li Y, Wang D, Yun A, Guo L. 2018. Changes in soil organic carbon concentration, chemical composition, and aggregate stability as influenced by tillage systems in the semi-arid and semi-humid area of North China. Can J Soil Sci. 98:91–102. doi:10.1139/cjss-2017-0045.
   Web of Science ®Google Scholar
• Essel E, Li LL, Deng CC, Xie JH, Zhang RZ, Luo ZZ, Cai LQ. 2018. Evaluation of bacterial and fungal diversity in a long-term spring wheat - field pea rotation field under different tillage practices. Can J Soil Sci. 98:619–637. doi:10.1139/cjss-2017-0155.
   Web of Science ®Google Scholar
• Fierer N. 2017. Embracing the unknown: disentangling the complexities of the soil microbiome. Nat Rev Microbiol. 15:579–590. doi:10.1038/nrmicro.2017.87.
   PubMed Web of Science ®Google Scholar
• Figuerola ELM, Guerrero LD, Rosa SM, Simonetti L, Duval ME, Galantini JA, Bedano JC, Wall LG, Erijman L. 2012. Bacterial indicator of agricultural management for soil under no-till crop production. PLoS One 7:12. doi:10.1371/journal.pone.0051075.
   Web of Science ®Google Scholar
• Ghaley BB, Rusu T, Sanden T, Spiegel H, Menta C, Visioli G, O’Sullivan L, Gattin IT, Delgado A, Liebig MA, et al. 2018. Assessment of benefits of conservation agriculture on soil functions in arable production systems in Europe. Sustainability 10. doi:10.3390/su10030794.
   Web of Science ®Google Scholar
• He JZ, Ge Y, Xu ZH, Chen CR. 2009. Linking soil bacterial diversity to ecosystem multifunctionality using backward-elimination boosted trees analysis. J Soil Sediment 9:547–554. doi:10.1007/s11368-009-0120-y.
   Web of Science ®Google Scholar
• Holland JM. 2004. The environmental consequences of adopting conservation tillage in Europe: reviewing the evidence. Agr Ecosyst Environ. 103:1–25. doi:10.1016/j.agee.2003.12.018.
   Web of Science ®Google Scholar
• Hugerth LW, Wefer HA, Lundin S, Jakobsson HE, Lindberg M, Rodin S, Engstrand L, Andersson AF. 2014. DegePrime, a program for degenerate primer design for broad-taxonomic-range PCR in microbial ecology studies. Appl Environ Microbiol. 80:5116–5123. doi:10.1128/aem.01403-14.
   PubMed Web of Science ®Google Scholar
• Ivanova AO, Dedysh SN. 2012. Abundance, diversity, and depth distribution of Planctomycetes in acidic northern wetlands. Front Microbiol. 3:5. doi:10.3389/fmicb.2012.00005.
   PubMed Web of Science ®Google Scholar
• Jat HS, Datta A, Sharma PC, Kumar V, Yadav AK, Choudhary M, Choudhary V, Gathala MK, Sharma DK, Jat ML, et al. 2018. Assessing soil properties and nutrient availability under conservation agriculture practices in a reclaimed sodic soil in cereal-based systems of North-West India. Arch Agron Soil Sci. 64:531–545. doi:10.1080/03650340.2017.1359415.
   PubMed Web of Science ®Google Scholar
• Jiang X, Wright AL, Wang X, Liang F. 2011. Tillage-induced changes in fungal and bacterial biomass associated with soil aggregates: a long-term field study in a subtropical rice soil in China. Appl Soil Ecol. 48:168–173. doi:10.1016/j.apsoil.2011.03.009.
   Web of Science ®Google Scholar
• Kielak A, Pijl AS, van Veen JA, Kowalchuk GA. 2009. Phylogenetic diversity of Acidobacteria in a former agricultural soil. Isme J. 3:378–382. doi:10.1038/ismej.2008.113.
   PubMed Web of Science ®Google Scholar
• Koyama A, Wallenstein MD, Simpson RT, Moore JC. 2014. Soil bacterial community composition altered by increased nutrient availability in Arctic tundra soils. Front Microbiol. 5:516. doi:10.3389/fmicb.2014.00516.
   PubMed Web of Science ®Google Scholar
• Lehman RM, Acosta-Martinez V, Buyer JS, Cambardella CA, Collins HP, Ducey TF, Halvorson JJ, Jin VL, Johnson JMF, Kremer RJ, et al. 2015. Soil biology for resilient, healthy soil. J Soil Water Conserv. 70:12A–18A. doi:10.2489/jswc.70.1.12A.
   Web of Science ®Google Scholar
• Mau RL, Liu CM, Aziz M, Schwartz E, Dijkstra P, Marks JC, Price LB, Keim P, Hungate BA. 2015. Linking soil bacterial biodiversity and soil carbon stability. Isme J. 9:1477–1480. doi:10.1038/ismej.2014.205.
   PubMed Web of Science ®Google Scholar
• Murillo JM, Moreno F, Madejon E, Giron IF, Pelegrin F. 2006. Improving soil surface properties: a driving force for conservation tillage under semi-arid conditions. Span J Agric Res. 4:97–104. doi:10.5424/sjar/2006041-180.
   Web of Science ®Google Scholar
• Navarrete AA, Kuramae EE, de Hollander M, Pijl AS, van Veen JA, Tsai SM. 2013. Acidobacterial community responses to agricultural management of soybean in Amazon forest soils. FEMS Microbiol Ecol. 83:607–621. doi:10.1111/1574-6941.12018.
   PubMed Web of Science ®Google Scholar
• Navarro-Noya YE, Gomez-Acata S, Montoya-Ciriaco N, Rojas-Valdez A, Suarez-Arriaga MC, Valenzuela-Encinas C, Jimenez-Bueno N, Verhulst N, Govaerts B, Dendooven L. 2013. Relative impacts of tillage, residue management and crop-rotation on soil bacterial communities in a semi-arid agroecosystem. Soil Biol Biochem. 65:86–95. doi:10.1016/j.soilbio.2013.05.009.
   Web of Science ®Google Scholar
• Ortiz-Cornejo NL, Romero-Salas EA, Navarro-Noya YE, Gonzalez-Zuniga JC, Ramirez-Villanueva DA, Vasquez-Murrieta MS, Verhulst N, Govaerts B, Dendooven L, Luna-Guido M. 2017. Incorporation of bean plant residue in soil with different agricultural practices and its effect on the soil bacteria. Appl Soil Ecol. 119:417–427. doi:10.1016/j.apsoil.2017.07.014.
   Web of Science ®Google Scholar
• Pankratov TA, Ivanova AO, Dedysh SN, Liesack W. 2011. Bacterial populations and environmental factors controlling cellulose degradation in an acidic sphagnum peat. Environ Microbiol. 13:1800–1814. doi:10.1111/j.1462-2920.2011.02491.x.
   PubMed Web of Science ®Google Scholar
• Pankratov TA, Kirsanova LA, Kaparullina EN, Kevbrin VV, Dedysh SN. 2012. Telmatobacter bradus gen. nov., sp nov., a cellulolytic facultative anaerobe from subdivision 1 of the Acidobacteria, and emended description of Acidobacterium capsulatum Kishimoto et al. 1991. Int J Syst Evol Micr. 62:430–437. doi:10.1099/ijs.0.029629-0.
   PubMed Web of Science ®Google Scholar
• Pastorelli R, Vignozzi N, Landi S, Piccolo R, Orsini R, Seddaiu G, Roggero PP, Pagliai M. 2013. Consequences on macroporosity and bacterial diversity of adopting a no-tillage farming system in a clayish soil of Central Italy. Soil Biol Biochem. 66:78–93. doi:10.1016/j.soilbio.2013.06.015.
   Web of Science ®Google Scholar
• Peigne J, Ball BC, Roger-Estrade J, David C. 2007. Is conservation tillage suitable for organic farming? A review. Soil Use Manage. 23:129–144. doi:10.1111/j.1475-2743.2006.00082.x.
   Web of Science ®Google Scholar
• Peterson GA, Lyon DJ, Fenster CR. 2012. Valuing long-term field experiments: quantifying the scientific contribution of a long-term tillage experiment. Soil Sci Soc Am J. 76:757–765. doi:10.2136/sssaj2011.0413.
   Web of Science ®Google Scholar
• Schlegel AJ, Assefa Y, Haag LA, Thompson CR, Stone LR. 2018. Long-term tillage on yield and water use of grain sorghum and winter wheat. Agron J. 110:269–280. doi:10.2134/agronj2017.02.0104.
   Web of Science ®Google Scholar
• Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, Parks DH, Robinson CJ, et al. 2009. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol. 75:7537–7541. doi:10.1128/aem.01541-09.
   PubMed Web of Science ®Google Scholar
• Singh K, Mishra AK, Singh B, Singh RP, Patra DD. 2016. Tillage effects on crop yield and physicochemical properties of sodic soils. Land Degrad Dev. 27:223–230. doi:10.1002/ldr.2266.
   Web of Science ®Google Scholar
• Sun H, Koal P, Liu D, Gerl G, Schroll R, Gattinger A, Joergensen RG, Munch JC. 2016. Soil microbial community and microbial residues respond positively to minimum tillage under organic farming in Southern Germany. Appl Soil Ecol. 108:16–24. doi:10.1016/j.apsoil.2016.07.014.
   Web of Science ®Google Scholar
• Sun RB, Li WY, Dong WX, Tian YP, Hu CS, Liu BB. 2018. Tillage changes vertical distribution of soil bacterial and fungal communities. Front Microbiol. 9:13. doi:10.3389/fmicb.2018.00699.
   PubMedGoogle Scholar
• Tan C, Cao X, Yuan S, Wang W, Feng Y, Qiao B. 2015. Effects of long-term conservation tillage on soil nutrients in sloping fields in regions characterized by water and wind erosion. Sci Rep. 5. doi:10.1038/srep17592.
   Web of Science ®Google Scholar
• Vlasenko AN, Sharkov IN, Sineshchekov VE, Prozorov AS. 2001. Reduced tillage and nitrogen mineralization. Eurasian Soil Sci. 34:993–998.
   Web of Science ®Google Scholar
• Wang H, Wang S, Zhang Y, Wang X, Wang R, Li J. 2018. Tillage system change affects soil organic carbon storage and benefits land restoration on loess soil in North China. Land Degrad Dev. 29:2880–2887. doi:10.1002/ldr.3015.
   Web of Science ®Google Scholar
• Wang XB, Cai DX, Hoogmoed WB, Oenema O, Perdok UD. 2006. Potential effect of conservation tillage on sustainable land use: a review of global long-term studies. Pedosphere 16:587–595. doi:10.1016/s1002-0160(06)60092-1.
   Web of Science ®Google Scholar
• Wang XB, Cai DX, Hoogmoed WB, Oenema O, Perdok UD. 2007. Developments in conservation tillage in rainfed regions of North China. Soil Till Res. 93:239–250. doi:10.1016/j.still.2006.05.005.
   Web of Science ®Google Scholar
• Wang Z, Liu L, Chen Q, Wen X, Liao Y. 2016a. Conservation tillage increases soil bacterial diversity in the dryland of northern China. Agron Sustain Dev. 36. doi:10.1007/s13593-016-0366-x.
   Web of Science ®Google Scholar
• Wang ZT, Liu L, Chen Q, Wen XX, Liao YC. 2016b. Conservation tillage increases soil bacterial diversity in the dryland of northern China. Agron Sustain Dev. 36:9. doi:10.1007/s13593-016-0366-x.
   Web of Science ®Google Scholar
• WRB IWG. 2014. World reference base for soil resources 2014. International soil classification system for naming soils and creating legends for soil maps. World soil resources reports, Rome: FAO; pp. 101.
   Google Scholar
• Zhu XC, Sun LY, Song FB, Liu SQ, Liu FL, Li XN. 2018. Soil microbial community and activity are affected by integrated agricultural practices in China. Eur J Soil Sci. 69:924–935. doi:10.1111/ejss.12679.
   Web of Science ®Google Scholar