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Research Article

Rice varieties with contrasting nitrogen use efficiency present different expression of amino acid transporters and ammonium transporters

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Pages 1251-1265 | Received 07 Jan 2022, Accepted 17 May 2022, Published online: 25 May 2022

References

  • Alexandratos N, Bruinsma J. 2012. World agriculture towards 2030/2050 the 2012 revision proof copy. ESA Work Pap [Internet]. 12(12):146. https://ageconsearch.umn.edu/record/288998%0Awww.fao.org/economic/esa
  • Amberger A. 1993. Efficient management of nitrogen fertilization in modern cropping systems. In: Fragoso MAC, Van Beusichem ML, Houwers A, editors. Optimization of plant nutrition. Developments in plant and soil sciences. Vol. 53. Dordrecht: Springer; p. 619–622.
  • Boggio SB, Palatnik JF, Heldt HW, Valle EM. 2000. Changes in amino acid composition and nitrogen metabolizing enzymes in ripening fruits of Lycopersicon esculentum Mill. Plant Sci. 159(1):125–133. doi:10.1016/S0168-9452(00)00342-3.
  • Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 72(1–2):248–254. doi:10.1016/0003-2697(76)90527-3.
  • Cai H, Zhou Y, Xiao J, Li X, Zhang Q, Lian X. 2009. Overexpressed glutamine synthetase gene modifies nitrogen metabolism and abiotic stress responses in rice. Plant Cell Rep. 28(3):527–537. doi:10.1007/s00299-008-0665-z.
  • Coelho CP, Santos LA, Rangel RP, Sperandio MVL, Bucher CA, De Souza SR, Fernandes MS. 2016. Rice varieties exhibit different mechanisms for nitrogen use efficiency (NUE). Aust J Crop Sci. 10(3):342–352. doi:10.21475/ajcs.2016.10.03.p7085.
  • Coulter JA. 2020. Sustainable cropping systems. Agronomy. 10(4):494. doi:10.3390/agronomy10040494.
  • de Sampaio RF, de Souza SR, de Sampaio RF, Fernandes MS. 2004. Nitrogen metabolism in rice cultivated under seasonal flush of nitrate. J Plant Nutr. 27(3):395–409. doi:10.1081/PLN-120028864.
  • Des Marais DL, Hernandez KM, Juenger TE. 2013. Genotype-by-environment interaction and plasticity: exploring genomic responses of plants to the abiotic environment. Annu Rev Ecol Evol Syst. 44(1):5–29. doi:10.1146/annurev-ecolsys-110512-135806.
  • Dos Santos AM, Stark EMLM, Silvestre M. 2003. Teores de nitrogênio, fósforo e frações solúveis em duas variedades de arroz cultivadas em solução nutritiva sob dois níveis de nitrato. Agronomia. 37(1):76–81.
  • Dos Santos AM, Lis Martinez Stark EM, Fernandes MS, de Souza SR. 2007. Effects of seasonal nitrate flush on nitrogen metabolism and soluble fractions accumulation in two rice varieties. J Plant Nutr. 30(9):1371–1384. doi:10.1080/01904160701555747.
  • Embrapa Arroz e Feijão. 2017. Dados de conjuntura da produção de arroz (Oryza sativa L.) no Brasil (1985-2015): área, produção e rendimento. 2016. Embrapa Arroz e Feijão, Santo Antônio de Goiás. http://www.cnpaf.embrapa.br/socioeconomia/index.htm.
  • Fageria NK, Baligar VC. 2005. Enhancing nitrogen use efficiency in crop plants. Adv Agron. 88(5):97–185.
  • Fan X, Naz M, Xiaoru F, Xuan W, Miller AJ, Xu G. 2017. Plant nitrate transporters: from gene function to application. J Exp Bot. 68(10):2463–2475. doi:10.1093/jxb/erx011.
  • Farnden KJS, Robertson JG. 1980. Methods for studying enzyme involved in metabolism related to nitrogen. In: Bergersen FJ (Ed.). Methods for evaluating biological nitrogen fixation. JWS; p. 265–314.
  • Felker P. 1977. Microdetermination of nitrogen in seed protein extracts with the salicylate-dichloroisocyanurate color reaction. Anal Chem. 49(7):1080. doi:10.1021/ac50015a053.
  • Fernandes MS. 1984. N-carriers, light and temp influences on free amino acid pool composition of rice plants. Turrialba 34 . 297–301.
  • Fernandes MS. 2014. Integração de conhecimentos para o uso eficiente de nitrogênio na agricultura. In: Moreira FMS, Kasuya MCM, editors. Fertilidade e biologia do solo. Viçosa-MG: SBCS; p. 173–196.
  • Ferraz ASLJ, Souza SR, Stark EMLM, Fernandes MS. 2001. Crude protein in rice grown in different environmental conditions. Physiol Mol Biol Plants. 7:149–157.
  • Ferreira LM, de Souza VM, Tavares OCH, Zonta E, Santa-Catarina C, de Souza SR, Fernandes MS, Santos LA. 2015. OsAMT1.3 expression alters rice ammonium uptake kinetics and root morphology. Plant Biotechnol Rep. 9(4):221–229. doi:10.1007/s11816-015-0359-2.
  • Ferreira LM, De Oliveira CM, Arruda LN, Braga RP, Tavares OCH, De Souza SR, Fernandes MS, Santos LA. 2020. Characteristics of the root system in two Brazilian upland rice varieties which exhibit contrasting behavior towards drought tolerance. Semin Agrar. 41(2):421–434. doi:10.5433/1679-0359.2020v41n2p421.
  • Gadal N, Shrestha J, Poudel MN, Pokharel B. 2019. A review on production status and growing environments of rice in Nepal and in the world. Arch Agric Environ Sci. 4(1):83–87. doi:10.26832/24566632.2019.0401013.
  • Gao J, Liu J, Li B, Li Z. 2001. Isolation and purification of functional total RNA from blue-grained wheat endosperm tissues containing high levels of starches and flavonoids. Plant Mol Biol Report. 19(2):185–186. doi:10.1007/BF02772163.
  • Girsang SS, Correa TQ, Quilty JR, Sanchez PB, Buresh RJ. 2020. Soil aeration and relationship to inorganic nitrogen during aerobic cultivation of irrigated rice on a consolidated land parcel. Soil Tillage Res Internet. 202(October 2019):104647. doi:10.1016/j.still.2020.104647.
  • Guan M, de Bang TC, Pedersen C, Schjoerring JK. 2016. Cytosolic glutamine synthetase Gln1;2 is the main isozyme contributing to GS1 activity and can be up-regulated to relieve ammonium toxicity. Plant Physiol. 171(3):1921–1933. doi:10.1104/pp.16.01195.
  • Hao D, Yang S, Huang Y, Su Y. 2016. Identification of structural elements involved in fine-tuning of the transport activity of the rice ammonium transporter OsAMT1;3. Plant Physiol Biochem. 108:99–108. doi:10.1016/j.plaphy.2016.07.003.
  • Holzschuh MJ, Bohnen H, Anghinoni I, Meurer EJ, Carmona FC, Costa SEVG. 2009. Rice growth as affected by combined ammonium and nitrate supply. Rev Bras Cienc Do Solo. 33(5):1323–1331. doi:10.1590/S0100-06832009000500025.
  • Jain M, Nijhawan A, Tyagi AK, Khurana JP. 2006. Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR. Biochem Biophys Res Commun. 345(2):646–651. doi:10.1016/j.bbrc.2006.04.140.
  • Ji Y, Huang W, Wu B, Fang Z, Wang X. 2020. The amino acid transporter AAP1 mediates growth and grain yield by regulating neutral amino acid uptake and reallocation in Oryza sativa. J Exp Bot. 71(16):4763–4777. doi:10.1093/jxb/eraa256.
  • Junior ASLF, Souza SR, Fernandes MS, Rossiello ROP. 1997. Eficiência do uso de nitrogênio para produção de grão e proteína por cultivares de arroz. Pesq Agropec Bras. 32(4):435–442.
  • Kronzucker HJ, Siddiqi MY, Glass ADM, Kirk GJD. 1999. Nitrate-ammonium synergism in rice. A subcellular flux analysis. Plant Physiol. 119(3):1041–1045. doi:10.1104/pp.119.3.1041.
  • Lewis OAM, Chadwick S, Withers J. 1983. The assimilation of ammonium by barley roots. Planta. 159(6):483–486. doi:10.1007/BF00409136.
  • Li H, Hu B, Chu C. 2017. Nitrogen use efficiency in crops: lessons from Arabidopsis and rice. J Exp Bot. 68(10):2477–2488. doi:10.1093/jxb/erx101.
  • Liu Y, Von Wirén N. 2017. Ammonium as a signal for physiological and morphological responses in plants. J Exp Bot. 68(10):2581–2592. doi:10.1093/jxb/erx086.
  • Livak KJ, Schmittgen TD. 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method. Methods. 25(4):402–408. doi:10.1006/meth.2001.1262.
  • Lu Y, Song Z, Lü K, Lian X, Cai H. 2012. Molecular characterization, expression and functional analysis of the amino acid transporter gene family (OsAATs) in rice. Acta Physiol Plant. 34(5):1943–1962. doi:10.1007/s11738-012-0995-x.
  • Omara P, Aula L, Oyebiyi F, Raun WR. 2019. World cereal nitrogen use efficiency trends: review and current knowledge. Agrosyst Geosci Environ. 2(1):1–8. doi:10.2134/age2018.10.0045.
  • Pereira EG, Ferreira LM, Fernandes EDC, Lima BRD, Santos LA, Fernandes MS. 2021. Root morphology and ammonium uptake kinetics in two traditional rice varieties submitted to different doses of ammonium nutrition. J Plant Nutr 44 . 1–14.
  • Pereira EG, De lima BR, Medeiros LRA, Ribeiro SA, Bucher CA, Santos LA, Fernandes MS, Rossetto CAV. 2022. Nutripriming with ammonium nitrate improves emergence and root architecture and promotes an increase in nitrogen content in upland rice seedlings. Biocatal Agric Biotechnol, 42 doi:10.1016/j.bcab.2022.102331.
  • Prinsi B, Negrini N, Morgutti S, Espen L. 2020. Nitrogen starvation and nitrate or ammonium availability differently affect phenolic composition in green and purple basil. Agronomy. 10(4):498. doi:10.3390/agronomy10040498.
  • R Core Team. 2019. R: a language and environment for statistical computing. Vienna (Austria): RFoundation for Statistical Computing. https://www.R-project.org/.
  • Ranathunge K, El-Kereamy A, Gidda S, Bi YM, Rothstein SJ. 2014. AMT1;1 transgenic rice plants with enhanced NH4+ permeability show superior growth and higher yield under optimal and suboptimal NH4+ conditions. J Exp Bot. 65(4):965–979. doi:10.1093/jxb/ert458.
  • Rocha JG, Ferreira LM, Tavares OCH, Santos AM, Souza SR. 2014. Cinética de absorção de nitrogênio e acúmulo de frações solúveis nitrogenadas e açúcares em girassol. Pesqui Agropecuária Trop. 44(4):381–390. doi:10.1590/S1983-40632014000400009.
  • Santos AMD, Bucher CA, Stark EMLM, Fernandes MS, Souza SR. 2009. Efeito da disponibilidade de nitrato em solução nutritiva sobre a absorção de nitrogênio e atividade enzimática de duas cultivares de arroz. Bragantia. 68(1):215–220. doi:10.1590/S0006-87052009000100023.
  • Sonoda Y, Ikeda A, Saiki S, Von Wirén N, Yamaya T, Yamaguchi J. 2003. Distinct expression and function of three ammonium transporter genes (OsAMT1;1 - 1;3) in rice. Plant Cell Physiol. 44(7):726–734. doi:10.1093/pcp/pcg083.
  • Souza SR, Fernandes MS. 2018. Nitrogênio. In: Souza SR, Fernandes MS, Santos LA, editors. Nutrição Mineral de Plantas. Viçosa-MG: SBCS. p. 309–375.
  • Sperandio MVL, Santos LA, Bucher CA, Fernandes MS, de Souza SR. 2011. Isoforms of plasma membrane H+-ATPase in rice root and shoot are differentially induced by starvation and resupply of NO3− or NH4+. Plant Sci. 180(2):251–258. doi:10.1016/j.plantsci.2010.08.018.
  • Tabuchi M, Abiko T, Yamaya T. 2007. Assimilation of ammonium ions and reutilization of nitrogen in rice (Oryza sativa L.). J Exp Bot. 58(9):2319–2327. doi:10.1093/jxb/erm016.
  • Taiz L, Zeiger E. 2017. Fisiologia e Desenvolvimento Vegetal. Porto Alegre: Artmed.
  • Tegeder M, Masclaux-Daubresse C. 2018. Source and sink mechanisms of nitrogen transport and use. New Phytol. 217(1):35–53. doi:10.1111/nph.14876.
  • Thomsen HC, Eriksson D, Møller IS, Schjoerring JK. 2014. Cytosolic glutamine synthetase: a target for improvement of crop nitrogen use efficiency? Trends Plant Sci Internet. 19(10):656–663. doi:10.1016/j.tplants.2014.06.002.
  • Turano FJ, Dashner R, Upadhyaya A, Caldwell CR. 1996. Purification of mitochondrial glutamate dehydrogenase from dark-grown soybean seedlings. Plant Physiol. 112(3):1357–1364. doi:10.1104/pp.112.3.1357.
  • Wang D, Xu Z, Zhao J, Wang Y, Yu Z. 2011. Excessive nitrogen application decreases grain yield and increases nitrogen loss in a wheat-soil system. Acta Agric Scand Sect B Soil Plant Sci. 61(8):681–692.
  • Xu G, Fan X, Miller AJ. 2012. Plant nitrogen assimilation and use efficiency. Annu Rev Plant Biol. 63(1):153–182. doi:10.1146/annurev-arplant-042811-105532.
  • Yemm EW, Cocking EC, Ricketts RE. 1955. The determination of amino-acids with ninhydrin. Analyst. 80(948):209–213. doi:10.1039/an9558000209.
  • Yemm EW, Willis AJ. 1957. The estimation of carbohydrates in plant extracts by anthrone. Biochem J. 57(3):508–514. doi:10.1042/bj0570508.
  • Yoshida S, Forno DA, Cock JH, Gomez KA. 1976. Laboratory manual for physiological studies of rice. 3rd ed. Manila (Philippines): International Rice Research Institutes; p. 83.
  • Zhang L, Garneau MG, Majumdar R, Grant J, Tegeder M. 2015. Improvement of pea biomass and seed productivity by simultaneous increase of phloem and embryo loading with amino acids. Plant J. 81(1):134–146. doi:10.1111/tpj.12716.
  • Zhao H, Ma H, Yu L, Wang X, Zhao J. 2012. Genome-wide survey and expression analysis of amino acid transporter gene family in rice (Oryza sativa L.). PLoS One. 7(11):e49210. doi:10.1371/journal.pone.0049210.

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