Approaches to molecular characterization of fungal biocontrol agents: some case studies

References

• Arisan-Atac , I. , Heidenreich , E. and Kubicek , C. P. 1995 . Randomly amplified polymorphic DNA fingerprinting identifies subgroups of Trichoderma viride and other Trichoderma sp. capable of chestnut blight control . FEMS Microbiol. Lett. , 126 : 249 – 255 .
   PubMed Web of Science ®Google Scholar
• Avis , T. J. , Caron , S. J. , Boekhout , T. , Hamelin , R. C. and Bélanger , R. R. 2001 . Molecular and physiological analysis of the powdery mildew antagonist Pseudozyma flocculosa and related fungi . Phytopathology , 91 : 249 – 254 .
   PubMedGoogle Scholar
• Baker , K. F. and Cook , R. J. 1982 . Biological control of plant pathogens , St. Paul, Minn : APS Press .
   Google Scholar
• Becker , J. O. and Schwinn , F. J. 1993 . Control of soil-borne pathogens with living bacteria and fungi: status and outlook . Pestic. Sci. , 37 : 355 – 363 .
   Google Scholar
• Becker , E. M. , Ball , L. A. and Hintz , W. E. 1999 . PCR-based genetic markers for detection and infection frequency analysis of the biocontrol fungus Chondrostereum purpureum on Sitka alder and trembling aspen . Biol. Control , 15 : 71 – 80 .
   Web of Science ®Google Scholar
• Bennett , J. E. 1990 . “ Sporothrix schenckii ” . In Principles and practice of infectious diseases , Edited by: Mandell , G. L. , Douglas , J. Jr. and Bennett , J. E. 1972 – 1975 . New York : Churchill Livingstone .
   Google Scholar
• Boekhout , T. 1995 . Pseudozyma Bandoni emend. Boekhout, a genus for yeast-like anamorphs of Ustilaginales . J. Gen. Appl. Microbiol. , 41 : 359 – 366 .
   Web of Science ®Google Scholar
• Bulat , S. A. , Lübeck , M. , Mironenko , N. , Jensen , D. F. and Lubeck , P. S. 1998 . UP-PCR analysis and ITS-1 ribotyping of strains of Trichoderma and Gliocladium . Mycol. Res. , 102 : 933 – 943 .
   Web of Science ®Google Scholar
• Chet , I. and Inbar , J. 1994 . Biological control of fungal pathogens . Appl. Biochem. Biotechnol. , 48 : 37 – 43 .
   PubMed Web of Science ®Google Scholar
• Cross , J. V. and Polonenko , D. R. 1996 . An industry perspective on registration and commercialization of biocontrol agents in Canada . Can. J. Plant Pathol. , 18 : 446 – 454 .
   Web of Science ®Google Scholar
• Fratamico , P. M. and Strobaugh , T. P. 1998 . Simultaneous detection of Salmonella spp. and Escherichia coli O157:H7 by multiplex PCR . J. Ind. Microbiol. Biotechnol. , 21 : 92 – 98 .
   Web of Science ®Google Scholar
• Fravel , D. R. , Rhodes , D. J. and Larkin , R. P. 1999 . “ Production and commercialization of biocontrol agents ” . In Integrated pest and disease management in greenhouse crops , Edited by: Albajes , R. , Lodovica Guillino , M. , van Lenteren , J. C. and Elad , Y. 365 – 376 . Dordrecht : Kluwer Academic Publishers .
   Google Scholar
• Gosselin , L. , Jobidon , R. and Bernier , L. 1996 . Assessment of genetic variation with Chondrostereum purpureum from Québec by random amplified polymorphic DNA analysis . Mycol. Res. , 100 : 151 – 158 .
   Google Scholar
• Gosselin , L. , Jobidon , R. and Bernier , L. 1999 . Genetic variability and structure of Canadian populations of Chondrostereum purpureum, a potential biophytocide . Mol. Ecol. , 8 : 113 – 122 .
   Google Scholar
• Grondona , I. , Hermosa , R. , Tejada , M. , Gomis , M. D. , Mateos , P. F. , Bridge , P. D. , Monte , E. and Garcia-Acha , I. 1997 . Physiological and biochemical characterization of Trichoderma harzianum, a biological control agent against soilborne fungal plant pathogens . Appl. Environ. Microbiol. , 68 : 3189 – 3198 .
   Google Scholar
• Hamelin , R. C. , Bérubé , P. , Gignac , M. and Bourassa , M. 1996 . Identification of root rot fungi in nursery seedlings by nested multiplex PCR . Appl. Environ. Microbiol. , 62 : 4026 – 4031 .
   PubMed Web of Science ®Google Scholar
• Julien , M. H. 1992 . Biological control of weeds: a world catalogue of agents and their target weeds , Wallingford : CAB International .
   Google Scholar
• Kiss , L. 1997 . Genetic diversity in Ampelomyces isolates, hyperparasites of powdery mildew fungi, inferred from RFLP analysis of the rDNA ITS region . Mycol. Res. , 101 : 1073 – 1080 .
   Web of Science ®Google Scholar
• Kiss , L. and Nakasone , K. K. 1998 . Ribosomal DNA internal transcribed spacer sequences do not support the species status of Ampelomyces quisqualis, a hyperparasite of powdery mildew fungi . Curr. Genet. , 33 : 362 – 367 .
   PubMed Web of Science ®Google Scholar
• Lipa , J. J. and Smits , P. H. 1999 . “ Microbial control of pests in greenhouses ” . In Integrated pest and disease management in greenhouse crops , Edited by: Albajes , R. , Lodovica Guillino , M. , van Lenteren , J. C. and Elad , Y. 295 – 307 . Dordrecht : Kluwer Academic Publishers .
   Google Scholar
• Lübeck , M. , Alekhina , I. A. , Stephensen Lübeck , P. , Funck Jensen , D. and Bulat , S. A. 1999 . Delineation of Trichoderma harzianum into two different genotypic groups by a highly robust fingerprinting method, UP-PCR, and UP-PCR product cross-hybridization . Mycol. Res. , 103 : 289 – 298 .
   Google Scholar
• Markovic , O. and Markovic , N. 1998 . Cell cross-contamination in cell cultures: the silent and neglected danger . Vitro Cell. Dev. Biol. , 34 : 1 – 8 .
   Google Scholar
• Ospina-Giraldo , M. D. , Royse , D. J. , Chen , X. and Romaine , C. P. 1999 . Molecular phylogenetic analyses of biological control strains of Trichoderma harzianum and other biotypes of Trichoderma spp. associated with mushroom green mold . Phytopathology , 89 : 308 – 313 .
   PubMed Web of Science ®Google Scholar
• Ramsfield , T. D. , Becker , E. M. , Rathlef , S. M. , Tang , Y. , Vrain , T. C. , Shamoun , S. F. and Hintz , W. E. 1996 . Geographic variation of Chondrostereum purpureum detected by polymorphisms in the ribosomal DNA . Can. J. Bot. , 74 : 1919 – 1929 .
   Google Scholar
• Samson , R. A. 1995 . Constraints associated with taxonomy of biocontrol fungi . Can. J. Bot. , 73 : S83 – S88 .
   Google Scholar
• Schlick , A. , Kuhls , K. , Meyer , W. , Lieckfeldt , E. , Borner , T. and Messner , K. 1994 . Fingerprinting reveals gamma-ray induced mutation in fungal DNA: Implications for identification of patent strains of Trichoderma harzianum . Curr. Genet. , 26 : 74 – 78 .
   PubMedGoogle Scholar
• Stacey , G. N. , Bolton , B. J. and Doyle , A. 1991 . “ The quality control of cell banks using DNA fingerprinting ” . In DNA fingerprinting: approaches and applications , Edited by: Burke , T. , Dolf , G. , Jeffreys , A. J. and Wolff , R. 361 – 370 . Basel : Birkhaüser Verlag .
   Google Scholar
• Traquair , J. A. , Shaw , L. A. and Jarvis , W. R. 1988 . New species of Stephanoascus with Sporothrix anamorphs . Can. J. Bot. , 66 : 926 – 933 .
   Google Scholar
• Wall , R. E. 1990 . The fungus Chondrostereum purpureum as a silvicide to control stump sprouting in hardwoods . North. J. Appl. For. , 7 : 17 – 19 .
   Google Scholar
• Woodhead , S. H. , O'Leary , A. L. , O'Leary , D. J. and Rabatin , S. L. 1990 . Discovery, development, and registration of a biocontrol agent from an industrial perspective . Can. J. Plant Pathol. , 12 : 328 – 331 .
   Web of Science ®Google Scholar
• Zimand , G. , Valinsky , L. , Elad , Y. , Chet , I. and Manulis , S. 1994 . Use of RAPD procedure for the identification of Trichoderma strains . Mycol. Res. , 98 : 531 – 534 .
   Web of Science ®Google Scholar