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EMERGING TECHNOLOGIES

Using genomics to understand the disease cycle of the fusarium head blight fungus, Gibberella zeae (anamorph Fusarium graminearum)

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Pages 486-498 | Accepted 12 Sep 2005, Published online: 01 Apr 2010

References

  • Adams , G. , Johnson , N. , Leslie , J. F. and Hart , L. P. 1987 . Heterokaryons of Gibberella zeae formed following hyphal anastomosis or protoplast fusion . Exp. Mycol. , 11 : 339 – 353 .
  • Andries , C. , Jarosz , A. and Trail , F. Effects of rainfall and temperature on production of perithecia by Gibberella zeae in field debris in Michigan . Proceedings of the 2000 National Fusarium Head Blight Forum . December 10–12 2000 , Erlanger, Ky., USA. pp. 118 – 123 . East Lansing, Mich., , USA : US Wheat and Barley Scab Initiative .
  • Bai , G. H. , Chen , L.-F. and Shaner , G. E. 2003 . “ Breeding for resistance to fusarium head blight of wheat in China ” . In Fusarium head blight of wheat and barley , Edited by: Leonard , K. and Bushnell , W. R. 296 – 317 . St. Paul, Minn : APS Press .
  • Bergmann , D. , Lukowitz , W. and Somerville , C. R. 2004 . Stomatal development and pattern controlled by a MAPKK kinase . Science (Washington, D.C.) , 304 : 1494 – 1496 .
  • Blank , L. M. , Lehmbeck , F. and Sauer , U. 2005 . Metabolic flux and network analysis in fourteen hemiascomycetous yeasts . FEMS Yeast Res. , 5 : 545 – 558 .
  • Bohnert , H. U. , Fudal , I. , Dioh , W. , Tharreau , D. , Notteghem , J. L. and Lebrun , M. H. 2004 . A putative polyketide synthase peptide synthetase from Magnaporthe grisea signals pathogen attack to resistant rice . Plant Cell , 16 : 2499 – 2513 .
  • Bowden , R. L. and Leslie , J. F. 1992 . Nitrate-nonutilizing mutants of Gibberella zeae (Fusarium graminearum) and their use in determining vegetative compatibility . Exp. Mycol. , 16 : 308 – 315 .
  • Bowden , R. L. and Leslie , J. F. 1999 . Sexual recombination in Gibberella zeae . Phytopathology , 89 : 182 – 188 .
  • Broad Institute . 2005 . Genome sequence of Fusarium gram inearum , Cambridge, Mass, , USA : Massachusetts Institute of Technology . [online]Available from
  • Brown , D. W. , Dyer , R. B. , McCormick , S. P. , Kendra , D. F. and Plattner , R. D. 2004 . Functional demarcation of the Fusarium core trichothecene gene cluster . Fungal Genet. Biol. , 41 : 454 – 462 .
  • Bushnell , W. R. , Hazen , B. E. and Pritsch , C. 2003 . “ Histology and physiology of fusarium head blight ” . In Fusarium head blight of wheat and barley , Edited by: Leonard , K. and Bushnell , W. R. 44 – 83 . St. Paul, Minn., , USA : APS Press .
  • Calpas , J. , Howard , R. , Turkington , K. , Clear , R. and Evans , I. 2003 . Fusarium head blight of barley and wheat , Edmonton, Alberta : Agriculture, Food and Rural Development . [updated March 2003][online]© 2003-2005 Government of Alberta Available from
  • Cappellini , R. A. and Peterson , J. L. 1965 . Macroconidium formation in submerged cultures by a non- sporulating strain of Gibberella zeae . Mycologia , 57 : 962 – 966 .
  • Cuomo , C. , Ma , L.-J. , Butler , J. , Calvo , S. , DeCaprio , D. , Elkins , T. , Galagan , J. , Xu , J.-R. , Trail , F. , Kistler , C. and Birren , B. 2005 . Sequencing and analysis of the Fusarium graminearum genome . Fungal Genet. Newsl. , 52 : 81 Suppl.
  • Davydov , S. E. 2002 . Quantitative characterization of the stomatal apparatus in monosomic lines of Chinese Spring wheat . Annu. Wheat Newsl. , 48 : 143 – 147 .
  • de Bary , A. 1887 . Comparative morphology and biology of the fungi, mycetozoa and bacteria , 89 Oxford : Clarendon Press . Translated from German to English in 1887 by H.E.F. Garnsey; original publication date in German, 1884
  • Delsuc , F. , Brinkmann , H. and Philippe , H. 2005 . Phylogenomics and the reconstruction of the tree of life . Nat. Rev. Genet. , 6 : 361 – 375 .
  • Desjardins , A. E. A role for ascospores in wheat head blight epidemics . XXIII Fungal Genetics Conference . March 15–20 2005 , Asilomar, Calif., USA. Fungal Genet. Newsl. 52(Suppl.): 13
  • Desjardins , A. E. , Proctor , R. H. , Bai , G. , McCormick , S. P. , Shaner , G. , Buechley , G. and Hohn , T. M. 1996 . Reduced virulence of trichothecene- nonproducing mutants of Gibberella zeae in wheat field tests . Mol. Plant-Microbe Interact. , 9 : 775 – 781 .
  • Desjardins , A. E. , Brown , D. W. , Yun , S.-H. , Proctor , R. H. , Lee , T. , Plattner , R. D. , Lu , S. -W. and Turgeon , B. G. 2004 . Deletion and complementation of the mating type (MAT) locus of the Wheat Head Blight pathogen Gibberella zeae . Appl. Environ. Microbiol. , 70 : 2437 – 2444 .
  • Dickman , M. B. , Park , Y. K. , Oltersdorf , T. , Li , W. , Clemente , T. and French , R. 2001 . Abrogation of disease development in plants expressing animal antiapoptotic genes . Proc. Natl. Acad. Sci. USA , 98 : 6957 – 6962 .
  • Dusabenyagasani , M. , Dostaler , D. and Hamelin , R. C. 1999 . Genetic diversity among Fusarium graminearum strains from Ontario and Quebec . Can. J. Plant Pathol. , 21 : 308 – 314 .
  • Eisen , J. A. 1998 . Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis . Genome Res. , 8 : 163 – 167 .
  • Eisen , J. A. and Fraser , C. M. 2003 . Phylogenomics: intersection of evolution and genomics . Science (Washington, D.C.) , 300 : 1706 – 1707 .
  • El-Gholl , N. E. , Schoulties , C. L. and Ridings , W. H. 1979 . Factors affecting perithecial production in Gibberella-tricincta . Can. J. Bot. , 57 : 2497 – 2500 .
  • Gaffoor , I. and Trail , F. 2006 . Characterization of two polyketide synthase genes involved in zearalenone biosynthesis in Gibberella zeae . Appl. Environ. Microbiol. , In press.
  • Gaffoor , I. , Brown , D. W. , Plattner , R. , Proctor , R. H. , Qi , W. and Trail , F. 2005 . Functional analysis of the polyketide synthase genes in the filamentous fungus Gibberella zeae (anamorph Fusarium graminearum) . Eukariot. Cell , 4 In press
  • Gale , L. R. 2003 . “ Population biology of Fusarium species causing head blight of grain crops ” . In Fusarium head blight of wheat and barley , Edited by: Leonard , K. and Bushnell , W. R. 120 – 143 . St. Paul, Minn., , USA : APS Press .
  • Gale , L. R. , Bryant , J. , Calvo , S. , Giese , H. , Katan , T. , O'Donnell , K. , Suga , H. , Taga , M. , Usgaard , T. R. , Ward , T. J. and Kistler , H. C. 2005 . Chromosome complement of the fungal plant pathogen Fusarium graminearum based on genetic and physical mapping and cytological observations . Genetics , 171 In press
  • Goswami , R. S. and Kistler , H. C. 2004 . Heading for disaster: Fusarium graminearum on cereal crops . Mol. Plant Pathol. , 5 : 515 – 525 .
  • Guenther , J. C. and Trail , F. 2005 . The development and differentiation of Gibberella zeae (anamorph: Fusarium graminearum) during colonization of wheat . Mycologia , 97 : 229 – 237 .
  • Halama , P. and Lacoste , L. 1992 . Determinism of sexual reproduction of Phaeosphaeria nodorum agent of wheat septoriosis. II. Effect of temperature and light . Can. J.Bot. , 70 : 1563 – 1569 .
  • Hohn , T. M. and Beremand , P. D. 1989 . Isolation and nucleotide sequence of a sesquiterpene cyclase gene from the trichothecene-producing fungus Fusarium sporotrichioides . Gene , 79 : 131 – 138 .
  • Hohn , T. M. , Desjardins , A. E. and McCormick , S. P. 1995 . The tri4 gene of Fusarium sporotrichioides encodes a cytochrome P450 monooxygenase involved in trichothecene biosynthesis . Mol. Gen. Genet. , 248 : 95 – 102 .
  • Hohn , T. M. , Krishna , R. and Proctor , R. H. 1999 . Characterization of a transcriptional activator controlling trichothecene toxin bio synthesis . Fungal Genet. Biol. , 26 : 224 – 235 .
  • Hou , Z. , Xue , C. , Katan , T. , Peng , Y. , Kistler , H. C. and Xu , J. R. 2002 . A MAP kinase gene (MGV1) for hyphal growth and plant infection in Fusarium graminearum . Mol. Plant-Microbe Interact , 15 : 1119 – 1127 .
  • Hu , G. and St. Leger , R. J. 2004 . A phylogenomic approach to reconstructing the diversification of serine proteases in fungi . J. Evol. Biol. , 17 : 1204 – 1214 .
  • Jurgenson , J. E. , Bowden , R. L. , Zeller , K. A. , Leslie , J. F. , Alexander , N. J. and Plattner , R. D. 2002 . A genetic map of Gibberella zeae (Fusarium graminearum) . Genetics , 160 : 1451 – 1460 .
  • Keller , E. F. 1983 . A feeling for the organism: the life and work of Barbara McClintock , New York, , USA : W.H. Freeman and Co. .
  • Kim , J. E. , Han , K. H. , Jin , H. M. , Kim , H. , Kim , J. C. , Yun , S. H. and Lee , Y. W. 2005 . Putative polyketide synthase and laccase genes for biosynthesis of aurofusarin in Gibberella zeae . Appl. Environ. Microbiol. , 71 : 1701 – 1708 .
  • Kimura , M. , Tokai , T. , O'Donnell , K. , Ward , T. J. , Fujimura , M. , Hamamoto , H. , Shibata , T. and Yamaguchi , I. 2003 . The tricho thecene biosynthesis gene cluster of Fusarium graminearum F15 contains a limited number of essential pathway genes and expressed non-essential genes . FEBS Lett. , 539 : 105 – 110 .
  • Kroken , S. , Glass , N. L. , Taylor , V. , Yoder , O. C. and Turgeon , B. G. 2003 . Phylogenomic analysis of type I polyketide synthase genes in pathogenic and sabrobic ascomycetes . Proc. Natl. Acad. Sci. USA , 100 : 15 670 – 15 675 .
  • Kruger , W. M. , Pritsch , C. , Chao , S. and Muehlbauer , G. J. 2002 . Functional and comparative bioinformatics analysis of expressed genes from wheat spikes infected with Fusarium graminearum . Mol. Plant-Microbe Interact. , 15 : 445 – 455 .
  • Lee , T. , Han , Y. K. , Kim , K. H. , Yun , S. H. and Lee , Y. W. 2002 . Tri13 and Tri7 determine deoxynivalenol- and nivalenol-producing chemotypes of Gibberella zeae . Appl. Environ. Microbiol. , 68 : 2148 – 2154 .
  • Lee , S.-H. , Yun , S.-H. and Lee , Y.-W. 2005a . Two putative isocitrate lyase genes (GzICL1 and GzICL2) are required for virulence and sexual development in Gibbella zeae . Fungal Genet. Newsl. , 52 : 126 Suppl.
  • Lee , B. N. , Kroken , S. , Chou , D. Y. T. , Robbertse , B. , Yoder , O. C. and Turgeon , B. G. 2005b . Functional analysis of all nonrib osomal peptide synthetases in Cochliobolus heterostrophus reveals a factor, NPS6, involved in virulence and resistance to oxidative stress . Eukariot. Cell. , 4 : 545 – 555 .
  • Leong , S. A. 1988 . “ Recombinant DNA research in phyto patho genic fungi ” . In Advances in plant pathology , Edited by: Sidhu , G. S. Vol. 6 , 1 – 26 . Orlando, Fla., , USA : Academic Press .
  • Lincoln , J. E. , Richael , C. , Overduin , B. , Smith , K. , Bostock , R. and Gilchrist , D. G. 2002 . Expression of the antiapoptotic baculovirus p53 gene in tomato blocks programmed cell death and provides broad- spectrum resistance to disease . Proc. Natl. Acad. Sci. USA , 99 : 15 217 – 15 221 .
  • Liolios , D. , Hugenholtz , P. , Bernal , A. and Kyrpides , N. 2005 . GOLD™ genomes online database v. 2.0 [updated 6 October 2005][online]© Nikos Kyrpides 1997–2005. Available from
  • Malz , S. , Grell , M. N. , Thrane , C. , Maier , F. J. , Rosager , P. , Felk , A. , Albertsen , K. S. , Salomon , S. , Bohn , L. , Schafer , W. and Giese , H. 2005 . Identification of a gene cluster responsible for the biosynthesis of aurofusarin in the Fusarium graminearum species complex . Fungal Genet. Biol. , 42 : 420 – 433 .
  • Matsumoto , G. , Wuchiyama , J. , Shingu , Y. , Kimura , M. , Yoneyama , K. and Yamaguchi , I. 1999 . The trichothecene bio synthesis regulatory gene from the type B producer Fusarium strains: sequence of Tri6 and its expression in Escherichia coli . Biosci. Biotechnol. Biochem. , 63 : 2001 – 2004 .
  • Mayer , A. M. , Staples , R. C. and Gilad , N. L. 2001 . Mechanisms of survival of necrotrophic fungal plant pathogens in hosts expressing the hypersensitive response . Phytochemistry (Oxford) , 58 : 33 – 41 .
  • McCormick , S. P. , Hohn , T. M. and Desjardins , A. E. 1996 . Isolarion and characterization fo Tri3, a gene encoding 15-O-acetyltransferase from Fusarium sporotrichioides . Appl. Environ. Microbiol. , 62 : 353 – 359 .
  • McCormick , S. P. , Harris , L. J. , Alexander , N. J. , Ouellet , T. , Saparno , A. , Allard , S. and Desjardins , A. E. 2004 . Tri1 in Fusarium graminearum encodes a P450 oxygenase . Appl. Environ. Microbiol. , 70 : 2044 – 2051 .
  • Mesterhazy , A. 2003 . “ Breeding wheat for Fusarium head blight resistance in Europe ” . In Fusarium head blight of wheat and barley , Edited by: Leonard , K. and Bushnell , W. R. 211 – 240 . St. Paul, Minn., , USA : APS Press .
  • Miller , S. S. , Chabot , D. M. P. , Ouellet , T. , Harris , L. J. and Fedak , G. 2004 . Use of a Fusarium graminearum strain transformed with green fluorescent protein to study infection in wheat (Triticum aestivum) . Can. J. Plant Pathol. , 26 : 453 – 463 .
  • Muehlbauer , G. J. and Bushnell , W. R. 2003 . “ Transgenic approaches to fusarium head blight resistance ” . In Fusarium Head Blight of Wheat and Barley , Edited by: Leonard , K. and Bushnell , W. R. 318 – 362 . St. Paul, Minn, , USA : APS Press .
  • Munich Informatics Center for Protein Sequences . 2005 . MIPS Fusarium graminearum genome database Neuherberg, , Germany [online]. © 2003 Forschungszentrum für Umwelt and Gesundheit (GSF)Available from
  • Nakayashiki , H. , Hanada , S. , Quoc , N. B. , Kadotani , N. , Tosa , Y. and Mayama , S. 2005 . RNA silencing as a tool for exploring gene function in ascomycete fungi . Fungal Genet. Biol. , 42 : 275 – 283 .
  • 2005 . National Center for Biotechnology Information Web site. Available from [updated 1 November 2005]
  • Nelson , R. R. 1971 . “ Hormonal involvement in sexual reproduction in the fungi with special reference to F-2, a fungal estrogen ” . In Morphological and biochemical events in plant-parasite interaction , Edited by: Adai , S. and Ouchi , S. 181 – 200 . Tokyo : The Phytopathological Society of Japan .
  • O'Donnell , K. , Kistler , H. C. , Tacke , B. K. and Caspar , H. H. 2000 . Gene genealogies reveal global phylogeographic structure and reproductive isolation among lineages of Fusarium gram inearum, the fungus causing wheat scab . Proc. Natl. Acad. Sci. USA , 97 : 7905 – 7910 .
  • O'Donnell , K. , Ward , T. J. , Geiser , D. M. , Kistler , H. C. and Aoki , T. 2004 . Genealogical concordance between the mating type locus and seven other nuclear genes supports formal recognition of nine phylogenetically distinct species within the Fusarium graminearum clade . Fungal Genet. Biol. , 41 : 600 – 623 .
  • Oliver , R. P. and Ipcho , S. V. S. 2004 . Arabidopsis pathology breathes new life into the necrotrophs-vs.-biotrophs classification of fungal pathogens . Mol. Plant Pathol. , 5 : 347 – 352 .
  • Pereyra , S. A. and Dill-Macky , R. 2004 . Survival and inoculum production of Gibberella zeae in wheat residue . Plant Dis. , 88 : 724 – 730 .
  • Pritsch , C. , Muehlbauer , G. J. , Bushnell , W. R. , Somers , D. A. and Vance , C. P. 2000 . Fungal development and induction of defense response genes during early infection of wheat spikes by Fusarium graminearum . Mol. Plant-Microbe Interact. , 13 : 159 – 169 .
  • Proctor , R. H. , Hohn , T. M. and McCormick , S. P. 1995 . Reduced virulence of Gibberella zeae caused by disruption of a trichothecene toxin biosynthetic gene . Mol. Plant-Microbe Interact. , 8 : 593 – 601 .
  • Pugh , G. W. , Johann , H. and Dickson , J. G. 1933 . Factors affecting infection of wheat heads by Gibberella saubinetii . J. Agric. Res. , 46 : 771 – 797 .
  • Ribichich , K. F. , Lopez , S. E. and Vegetti , A. C. 2000 . Histo patho logical spikelet changes produced by Fusarium graminearum in susceptible and resistant wheat cultivars . Plant Dis. , 84 : 794 – 802 .
  • Schmale , D. G. III , Shah , D. A. and Bergstrom , G. C. 2005 . Spatial patterns of viable spore deposition of Gibberella zeae in wheat fields . Phytopathology , 95 : 472 – 479 .
  • Schoch , C. L. , Aist , J. R. , Yoder , O. C. and Turgeon , B. G. 2003 . A complete inventory of fungal kinases in representative filamentous ascomycetes . Fungal Genet. Biol. , 39 : 1 – 15 .
  • Scott-Craig , J. S. , Otani , K. , Trail , F. , Hallen , H. E. , Phinney , B. , Paper , J. M. , Adhikari , N. and Walton , J. D. 2005 . Defining the secretome of Fusarium graminearum . Fungal Genet. Newsl. , 52 : 98 Suppl.
  • Seong , K. , Tracy , M. , Hou , Z. , Kistler , H. C. and Xu , J. R. REMI mutagenesis in the wheat scab fungus Fusarium gram inearum . Proceedings of the 2003 US National Fusarium Head Blight Forum . December 13–15 2003 , Bloomington, Minn., USA. pp. 177 East Lansing, Mich., , USA : US Wheat Scab and Barley Initiative .
  • Seong , K. , Yao , J. , Kistler , H. C. and Xu , J. R. 2005 . REMI mutagenesis and identification of infection defective mutants in wheat scab fungus Fusarium graminearum . Fungal Genet. Newsl. , 52 : 106 Suppl
  • Shaner , G. 2003 . “ Epidemiology of Fusarium head blight of small grain cereals in North America ” . In Fusarium head blight of wheat and barley , Edited by: Leonard , K. J. and Bushnell , W. R. 84 – 119 . St. Paul, Minn., , USA : APS Press .
  • Skadsen , R. W. and Hohn , T. M. 2004 . Use of Fusarium gram inearum transformed with gfp to follow infection patterns in barley and Arabidopsis . Physiol. Mol. Plant Pathol. , 64 : 45 – 53 .
  • Stack , R. W. 2003 . “ History of fusarium head blight with emphasis on North America ” . In Fusarium head blight of wheat and barley , Edited by: Leonard , K. J. and Bushnell , W. R. 1 – 34 . St. Paul, Minn., , USA : APS Press .
  • Steffenson , B. J. 2003 . “ Fusarium head blight of barley: impact, epidemics, management and strategies for identifying and utilizing genetic resistance ” . In Fusarium head blight of wheat and barley , Edited by: Leonard , K. J. and Bushnell , W. R. 241 – 295 . St. Paul, Minn., , USA : APS Press .
  • Tag , A. G. , Garifullina , G. F. , Peplow , A. W. , Ake , C. , Phillips , T. D. Jr. , Hohn , T. M. and Beremand , M. N. 2001 . A novel regulatory gene, Tri10, controls trichothecene toxin production and gene expression . Appl. Environ. Microbiol. , 67 : 5294 – 5302 .
  • Trail , F. and Common , R. 2000 . Perithecial development by Gibberella zeae: a light microscopy study . Mycologia , 92 : 130 – 138 .
  • Trail , F. , Xu , H. , Loranger , R. and Gadoury , D. 2002 . Physiological and environmental aspects of ascospore discharge in Gibberella zeae (anamorph Fusarium graminearum) . Mycologia , 94 : 181 – 189 .
  • Trail , F. , Xu , J. R. , San Miguel , P. , Halgren , R. G. and Kistler , H. C. 2003 . Analysis of expressed sequence tags from Gibberella zeae (anamorph Fusarium graminearum) . Fungal Genet. Biol. , 38 : 187 – 197 .
  • Trail , F. , Gaffoor , I. and Vogel , S. 2005 . Ejection mechanics and trajectory of the ascospores of Gibberella zeae (anamorph Fusarium graminearum) . Fungal Genet. Biol. , 42 : 528 – 533 .
  • Tu , D. S. 1953 . Factors affecting the reaction of wheat blight infection caused by Gibberella zeae , Columbus, Ohio, , USA : The Ohio State University . Ph.D. thesis
  • United States Council for Agricultural Science and Technology . 2003 . Mycotoxins: risks in plant, animal and human systems , CAST (Counc. Agric. Sci. Technol.) Rep. No. 139
  • Urban , M. , Danels , S. , Mott , E. and Hammond-Kosack , K. 2002 . Arabidopsis is susceptible to the cereal ear blight fungal pathogens Fusarium graminearum and Fusarium culmorum . Plant J. , 32 : 961 – 973 .
  • Voigt , C. A. , Schafer , W. and Salomon , S. 2005 . A secreted lipase of Fusarium graminearum is a virulence factor required for infection of cereals . Plant J. , 42 : 364 – 375 .
  • Wanyoike , M. W. , Kang , Z. and Buchenauer , H. 2002 . Importance of cell wall degrading enzymes produced by Fusarium gram inearum during the infection of wheat heads . Eur. J. Plant Pathol. , 108 : 803 – 810 .
  • Windels , C. E. 2000 . Economic and social impacts of Fusarium head blight: changing farms and rural communities in the Northern Great Plains . Phytopathology , 90 : 17 – 21 .
  • Xu , H. , Andries , C. and Trail , F. 2000 . Studies on the mechanism of forcible discharge of ascospores in Gibberella zeae . Phytopathology , 90 : S86 Suppl.
  • Yoder , O. C. and Turgeon , B. G. 2001 . Fungal genomics and patho genicity . Curr. Opin. Plant Biol. , 4 : 315 – 321 .
  • Zeller , K. A. , Bowden , R. L. and Leslie , J. F. 2003 . Diversity of epidemic populations of Gibberella zeae from small quadrats in Kansas and North Dakota . Phytopathology , 93 : 874 – 880 .

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