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Epidemiology / Épidémiologie

Genetic diversity and population structure of Rhizoctonia solani AG-1 IA, the causal agent of rice sheath blight, in South China

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Pages 179-186 | Accepted 07 Apr 2014, Published online: 19 May 2014

References

  • Anderson FM, Datta N, Shaw EJ. 1972. R factors in hospital infection. Brit Med J. 3:82–85. doi:10.1136/bmj.3.5818.82
  • Bernardes-de-Assis J, Storari M, Zala M, Wang W, Jiang D, ShiDong L, Jin MS, McDonald BA, Ceresini PC. 2009. Genetic structure of populations of the rice-infecting pathogen Rhizoctonia solani AG-1 IA from China. Phytopathology. 99:1090–1099. doi:10.1094/PHYTO-99-9-1090
  • Ceresini PC, Shew HD, Vilgalys RJ, Rosewich UL, Cubeta MA. 2002. Genetic structure of populations of Rhizoctonia solani AG-3 on potato in eastern North Carolina. Mycologia. 94:450–460. doi:10.2307/3761779
  • Ciampi S, Böcking T, Kilian KA, Harper JB, Gooding JJ. 2008. Click chemistry in mesoporous materials: functionalization of porous silicon rugate filters. Langmuir. 24:5888–5892. doi:10.1021/la800435d
  • Cubeta MA, Vilgalys R. 1997. Population biology of the Rhizoctonia solani complex. Phytopathology. 87:480–484. doi:10.1094/PHYTO.1997.87.4.480
  • Dubey SC, Tripathi A, Upadhyay BK. 2012. Molecular diversity analysis of Rhizoctonia solani isolates infecting various pulse crops in different agro-ecological regions of India. Folia Microbiol. 57:513–524. doi:10.1007/s12223-012-0165-y
  • Duncan S, Barton JE, O’Brien PA. 1993. Analysis of variation in isolates of Rhizoctonia solani by random amplified polymorphic DNA assay. Mycol Res. 97:1075–1082. doi:10.1016/S0953-7562(09)80508-X
  • González N, Godoy-lutz G, Steadman J, Higgins R, Eskridge K. 2012. Assessing genetic diversity in the web blight pathogen Thanatephorus cucumeris (anamorph = Rhizoctonia solani) subgroups AG-1-IE and AG-1-IF with molecular markers. J Gen Plant Pathol. 78:85–98. doi:10.1007/s10327-012-0361-2
  • Guleria S, Aggarwal R, Thind TS, Sharma TR. 2007. Morphological and pathological variability in rice isolates of Rhizoctonia solani and molecular analysis of their genetic variability. J Phytopathol. 155:654–661. doi:10.1111/j.1439-0434.2007.01291.x
  • Hu C-J, Wei Y-W, Huang S-L, Shi G-Y, Li Y-R. 2010. Identification and characterization of fungal strains involved in rice sheath blight complex in Guangxi province. Acta Agricul Boreali Occident Sin. 19:45–51.
  • Jiang L-B, Zhao K-F, Wang D-J, Wu J-C. 2012. Effects of different treatment methods of the fungicide jinggangmycin on reproduction and vitellogenin gene (Nlvg) expression in the brown planthopper Nilaparvata lugens Stål (Hemiptera: Delphacidae). Pestic Biochem Physiol. 102:51–55. doi:10.1016/j.pestbp.2011.10.009
  • Kar PK, Srivastava AK, Sinha MK, Sinha AK, Prasad BC. 2010. Conservation genetics, combination of molecular biology and ecology: tropical tasar silkworm as an example. Bioscan. 3:627–634.
  • Khodayari M, Safaie N, Shamsbakhsh M. 2009. Genetic diversity of Iranian AG1-IA isolates of Rhizoctonia solani, the cause of rice sheath blight, using morphological and molecular markers. J Phytopathol. 157:708–714. doi:10.1111/j.1439-0434.2009.01541.x
  • Li T-D, Peng S-W, Wang Z-H, Lu G-D. 2010. Genetic diversiy analysis of Rhizoctonia solani populations from Fujian using intersimple sequences repeats (ISSR) technique. Acta Phytopathol Sin. 40:186–194.
  • Liu ZL, Nickrent DL. 1990. Genetic relationships among isolates of Rhizoctonia solani anastomosis group-2 based on isozyme analysis. Can J Plant Pathol. 12:376–382. doi:10.1080/07060669009500977
  • Liu ZL, Sinclair JB. 1992. Genetic diversity of Rhizoctonia solani anastomosis group 2. Phytopathology. 82:778–787. doi:10.1094/Phyto-82-778
  • Mirmajlessi SM, Safaie N, Mostafavi HA, Mansouripour SM, Mahmoudy SB. 2012. Genetic diversity among crown and root rot isolates of Rhizoctonia solani isolated from cucurbits using PCR based techniques ISSR. Afr J Agric Res. 7:583–590.
  • Nan P, Shi SH, Peng SL, Tian CJ, Zhong Y. 2003. Genetic diversity in Primula obconica (Primulaceae) from central and southwest China as revealed by ISSR markers. Ann Bot. 91:329–333. doi:10.1093/aob/mcg018
  • Neeraja CN, Shenoy VV, Reddy CS, Sarma NP. 2003. Isozyme polymorphism and virulence of Indian isolates of the rice sheath blight fungus. Mycopathologia. 156:101–108. doi:10.1023/A:1022988710654
  • Nei M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics. 89:583–590.
  • O’Brien PA. 1994. Molecular markers in Australian isolates of Rhizoctonia solani. Mycol Res. 98:665–671. doi:10.1016/S0953-7562(09)80414-0
  • Ogoshi A. 1987. Ecology and pathogenicity of anastomosis and intraspecific groups of Rhizoctonia Solani Kuhn. Annu Rev Phytopathol. 25:125–143. doi:10.1146/annurev.py.25.090187.001013
  • Pan XB, Rush MC, Sha XY, Xie QJ, Linscombe SD, Stetina SR, Oard JH. 1999. Major gene, nonallelic sheath blight resistance from the rice cultivars Jasmine 85 and Teqing. Crop Sci. 39:338–346.
  • Pradeep Reddy M, Sarla N, Siddiq EA. 2002. Inter simple sequence repeat (ISSR) polymorphism and its application in plant breeding. Euphytica. 128:9–17. doi:10.1023/A:1020691618797
  • Rohlf FJ. 1993. NTSYS-pc: numerical taxonomy and multivariate analysis system version 1.80. Setauket, NY: Exeter Biological Software.
  • Rosewich UL, Pettway RE, Mcdonald BA, Kistler HC. 1999. High levels of gene flow and heterozygote excess characterize Rhizoctonia solani AG-1 IA (Thanatephorus cucumeris) from Texas. Fungal Genet Biol. 28:148–159. doi:10.1006/fgbi.1999.1174
  • Sharma M, Gupta SK, Sharma TR. 2005. Characterization of variability in Rhizoctonia solani by using morphological and molecular markers. J Phytopathol. 153:449–456. doi:10.1111/j.1439-0434.2005.01000.x
  • Stodart BJ, Harvey PR, Neate SM, Melanson DL, Scott ES. 2007. Genetic variation and pathogenicity of anastomosis group 2 isolates of Rhizoctonia solani in Australia. Mycol Res. 111:891–900. doi:10.1016/j.mycres.2007.05.008
  • Taheri P, Gnanamanickam S, Höfte M. 2007. Characterization, genetic structure, and pathogenicity of Rhizoctonia spp. associated with rice sheath diseases in India. Phytopathology. 97:373–383. doi:10.1094/PHYTO-97-3-0373
  • Taheri P, Tarighi S. 2011. Cytomolecular aspects of rice sheath blight caused by Rhizoctonia solani. Eur J Plant Pathol. 129:511–528. doi:10.1007/s10658-010-9725-7
  • Toda T, Hyakumachi M, Arora DK. 1999. Genetic relatedness among and within different Rhizoctonia solani anastomosis groups as assessed by RAPD, ERIC and REP-PCR. Microbiol Res. 154:247–258. doi:10.1016/S0944-5013(99)80022-6
  • Wang L, Liu LM, Wang ZG, Huang SW. 2013. Genetic structure and aggressiveness of Rhizoctonia solani AG 1-IA, the cause of sheath blight of rice in southern China. J Phytopathol. 161:753–762. doi:10.1111/jph.12127
  • Wang SB, Miao XX, Zhao WG, Huang B, Fan MZ, Li ZZ, Huang YP. 2005. Genetic diversity and population structure among strains of the entomopathogenic fungus, Beauveria bassiana, as revealed by inter-simple sequence repeats (ISSR). Mycol Res. 109:1364–1372. doi:10.1017/S0953756205003709
  • Willocquet L, Fernandez L, Savary S. 2000. Effect of various crop establishment methods practised by Asian farmers on epidemics of rice sheath blight caused by Rhizoctonia solani. Plant Pathol. 49:346–354. doi:10.1046/j.1365-3059.2000.00454.x
  • Wright S. 1950. Genetical structure of populations. Nature. 166:247–249. doi:10.1038/166247a0
  • Wu H-F, Wang X-Y, Luo C-Q, Chen Z-Y. 2013. Genetic diversity and pathogenicity of Rhizoctonia solani isolates from Jiangsu province. Jiangsu J Agric Sci. 29:51–59.
  • Wu Q, Zhang W, Pwee KH, Kumar PP. 2003. Cloning and characterization of rice HMGB1 gene. Gene. 312:103–109. doi:10.1016/S0378-1119(03)00605-X
  • Yeh FC, Yang RC, Boyle TBJ, Ye ZH, Mao JX. 1997. POPGENE, the user-friendly shareware for population genetic analysis [M]. Calgary, Canada: Molecular Biology and Biotechnology Centre, University of Alberta.
  • Zheng A, Lin R, Zhang D, Qin P, Xu L, Ai P, Ding L, Wang Y, Chen Y, Liu Y, et al. 2013. The evolution and pathogenic mechanisms of the rice sheath blight pathogen. Nat Commun. 4:1424. doi:10.1038/ncomms2427
  • Zhou E-X, Cao J-X, Yang M, Zhu X-R. 2002. Studies on the genetic diversity of Rhizoctonia solani AG-1-IA from six provinces in the southern China. J Nanjing Agric Univ. 25:36–40.
  • Zietkiewicz E, Rafalski A, Labuda D. 1994. Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics. 20:176–183. doi:10.1006/geno.1994.1151

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