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Original Articles

Studies on the Synthesis of S5′,6-Methano-5′-Thiourldines

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Pages 1983-1998 | Received 27 Feb 1997, Accepted 07 Jul 1997, Published online: 20 Aug 2006

REFERENCES

  • Otter , B. A. , Patil , S. A. , Spada , M. R. , Jelicks , L. A. , Yoshimura , Y. , Matsuda , A. and Klein , R. S. 1992 . Synthesis and Conformational Studies of O5′,6-Methanouridine—A New Type of Pyrimidine Cyclonucleoside . Nucleosides, Nucleotides & Nucleic Acids , 11 : 615 – 635 .
  • Megati , S. , Ealick , S. E. , Naguib , F. N. M. , el Kouni , M. H. , Klein , R. S. and Otter , B. A. 1994 . O5′,6-Methanocytidine – Synthesis, Conformational Properties and Deamination by Cytidine Deaminase . Nucleosides, Nucleotides & Nucleic Acids , 13 : 2151 – 2168 . In addition, 1 does not bind to human uridine phosphorylase (personal communication from M. H. el Kouni and F. N. M. Naguib)
  • el Kouni , M. H. , Naguib , F. N. M. , Panzica , R. P. , Otter , B. A. , Chu , S. -H , Gosselin , G. , Chu , C. K. , Schinazi , R. F. , Shealy , Y. F. , Goudgaon , N. , Ozerov , A. A. , Ueda , T. and Iltzsch , M. 1996 . Effects of Modifications in the Pentose Moiety and Conformational Changes on the Binding of Nucleoside Ligands to Uridine Phosphorylase from Toxoplasma gondii . Biochem. Pharmacol. , 51 : 1687 – 1700 .
  • In an alternative mechanism, kindly suggested by a reviewer, the enolate anion derived from the 5-acetoxy group could facilitate the displacement reaction via intermediates of the following type
  • Benzoylation was accomplished with benzoic anhydride because use of benzoyl chloride leads to a mixture of 9 and the bis-benzoylated-5′-chloro nucleoside formed by cleavage of the 2,5′-anhydro linkage. Other examples that illustrate the marked susceptibility of the anhydro linkage to ring opening include the unexpected formation of the 5′-Otosyl nucleoside when 5-hydroxy-6-hydroxymethyl-2′,3′-O-isopropylidene-2,5′-anhydrouridine (8, but R = H) is treated with ptoluenesulfonic acid and acetone in order to form the 5,743 isopropylidene compound. Similarly, 8 (R = OAc) undergoes cleavage on treatment with silver trifluoroacetate in pyridine at room temperature to afford an intermediate ester that hydrolyzes during aqueous work-up to give the 5′-unsubstituted product. This latter reaction represents a new method for converting 2,5′-anhydro nucleosides into the parent alcohols under very mild conditions
  • Hirota , K. , Yamada , Y. , Kitade , Y. and Senda , S. 1981 . Pyrimidine Derivatives and Related Compounds. Part 37. Novel Nucleophilic Substitutions of 5-Bromo-6-Methyluracils or 5-Bromo-6-Bromomethyluracils with Aromatic Amines . J. Chem. Soc. Perkin , 1 : 2943 – 2947 .
  • Sarma , M. S. P. , Klein , R. S. and Otter , B. A. 1994 . Nucleophilic Substitution Reactions of 5-Bromo-6-Methyluridines . Nucleosides, Nucleotides & Nucleic Acids , 13 : 369 – 378 .
  • Vorbruggen , H. , Krolikiewicz , K. and Bennua , B. 1981 . Nucleoside Synthesis with Trimethylsilyl Triflate and Perchlorate as Catalysts . Chem. Ber. , 114 : 1234 – 1255 .
  • Mitsunobu , O. 1981 . The Use of Diethyl Azodicarboxylate and Triphenylphosphine in Synthesis and Transformation of Natural Products . Synthesis , : 1 – 28 .
  • Hughes , D. L. 1992 . Mitsunobu Reaction . Org. Reactions , 42 : 335 – 636 .
  • Molecular modeling studies using the Hyperchem™ . implementation of the MM2 force field were conducted along the lines described earlier.2 The three low energy structures found have the following conformational parameters: 3a (2′-exo form), 20.8 Kcal, γ (S5′, C5′, C4′, C3′) = 62°, χ (O4′-C1′-N1-C2) = −173° 3a (3′-exo form), 19.2 Kcal, γ = 72°, χ = −156° 3b (4′-endo form), 19.1 Kcal, γ = 165° χ = 179°
  • Yoshimura , Y. , Matsuda , A. and Ueda , T. 1989 . Chem. Pharm. Bull. , 37 : 660 and references therein
  • Hruska , F. E. 1971 . Long-Range Spin-Spin Coupling in Pyrimidine Nucleosides . Can. J. Chem. , 49 : 2111 – 8 .
  • Sodum , R. S. and Otter , B. A. 1986 . Studies on the Chemistry of 5-Acetoxy-6-(acetoxymethyl)-uridines: Synthesis of a New Type of 5′-Cyclonucleoside . Nucleosides, Nucleotides & Nucleic Acids , 5 : 385 – 397 .
  • Sasson , I. M. , Gagnier , R. P. and Otter , B. A. 1983 . The Chemistry of 5-Hydroxy-6-(Hydroxyalkyl)uracils. Synthesis of Spiro[pyrimidine-4,2′- pyrano[3,2-d]pyrimidines] . J. Heterocyclic Chem. , 20 : 753 – 757 . Large excesses of acetic anhydride and benzoic anhydride were used in the syntheses of 8 and 9, respectively, in order to promote rapid bis-O-acylation of the intermediate 5-hydroxy-6-(hydroxymethyl)uridines. Partial acylation is known to lead to the formation of 5-oxo-6-methylenepyrimidines that readily dimerize under these conditions. See
  • Otter , B. A. , Sasson , I. M. and Gagnier , R. P. 1982 . New Hydantoin Synthesis via a Reactive 5-oxo-6-methylenepyrimidine Intermediate . J. Org. Chem. , 47 : 508 – 513 .

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