635
Views
19
CrossRef citations to date
0
Altmetric
Articles

Genetics, Molecular Mechanisms and Deployment of Bacterial Blight Resistance Genes in Rice

, , , , , , & show all

References

  • Adhikari, T. B., Mew, T. W., and Leach, J. E. 1999. Genotypic and pathotypic diversity in Xanthomonas oryzae pv. oryzae in Nepal. Phytopathology 89:687–694.
  • Afzal, A. J., Wood, A. J., and Lightfoot, D. A. 2008. Plant receptor-like serine threonine kinases: roles in signaling and plant defense. Mol. Plant Microbe Interact. 21:507–517.
  • Amante-Bordeos, A., Sitch, L. A., Nelson, R., Dalmacio, R. D., Oliva, N. P., Aswidinnoor, H., and Leung, H. 1992. Transfer of bacterial blight and blast resistance from the tetraploid wild rice Oryza minuta to cultivated rice, Oryza sativa. Theor. Appl. Genet. 84:345–354.
  • Antony, G., Zhou, J., Huang, S., Li, T., Liu, B., White, F., and Yang, B. 2010. Rice Xa13 recessive resistance to bacterial blight is defeated by induction of the disease susceptibility gene Os-11N3. Plant Cell. 22: 3864–3876. doi:10.1105/tpc.110.078964
  • Antolín-Llovera, M., Ried, M. K., Binder, A., and Parniske, M. 2012. Receptor kinase signaling pathways in plant-microbe interactions. Annu. Rev. Phytopathol. 50:451–473.
  • Arunakumari, K., Durgarani, C. V., Satturu, V., Sarikonda, K.R., Chittoor, P. D. R., Vutukuri, B., Laha, G. S., Nelli, A. P. K., Gattu, S., Jamal, M., Prasadbabu, A., Hajira, S., and Sundaram, R. M. 2016. Marker-assisted pyramiding of genes conferring resistance against bacterial blight and blast diseases into Indian rice variety MTU1010. Rice Sci. 23:306–316. doi:10.1016/j.rsci.2016.04.005
  • Balachiranjeevi, C. H., Bhaskar Naik, S. ,Abhilash Kumar, V., Harika, G., Mahadev Swamy, H. K., Hajira, S., Dilip Kumar, T., Anila, M., Kale, R. R., Yugender, A., Pranathi, K., Koushik, M. B. V. N., Suneetha, K., Bhadana, V. P., Hariprasad, A. S., Laha, G. S., Rekha, G., Balachandran, S. M., Madhav, M. S., Senguttuvel, P., Fiyaz, A. R., Viraktamath, B. C., Giri, A., Swamy, B. P. M., Ali, J., and Sundaram, R. M. 2018. Marker-assisted pyramiding of two major, broad-spectrum bacterial blight resistance genes, Xa21 and Xa33 into an elite maintainer line of rice, DRR17B. PLoS One. 13:e0201271. doi:10.1371/journal.pone.0201271
  • Baliyan, N., Malik, R., Rani, R., Mehta, K., Vashisth, U., Dhillon, S., and Boora, K. 2018. Integrating marker-assisted background analysis with foreground selection for pyramiding bacterial blight resistance genes into Basmati rice. C R Biol. 341:1–8. doi:10.1016/j.crvi.2017.11.003.
  • Basavaraj, S. H., Singh, V. K., Singh, A., Singh, A., Singh, A., Anand, D., Yadav, S., Ellur, R. K., Singh, D., Krishnan, S. G., Nagarajan, M., Mohapatra, T., Prabhu, K. V., and Singh, A. K. 2010. Marker-assisted improvement of bacterial blight resistance in parental lines of Pusa RH10, a superfine grain aromatic rice hybrid. Mol. Breeding 26:293–305. doi:10.1007/s11032-010-9407-3
  • Bharathkumar, S., Paulraj, R. D., Brindha, P. V., Kavitha, S., and Gnanamanickam, S. S. 2008. Improvement of bacterial blight resistance in rice cultivars Jyothi and IR50 via marker-assisted backcross breeding. J. Crop Improv. 21:101–116. doi:10.1300/J411v21n01_07
  • Bhapkar, D. G., Kulkarni, N. B., and Chavan, V. M. 1960. Bacterial blight of paddy. Poona Agric. Coll. Mgn. 51:36–46.
  • Bhasin, H., Bhatia, D., Raghuvanshi, S., Lore, J. S., Sahi, G. K., Kaur, B., Vikal, Y., and Singh, K. 2012. New PCR-based sequence tagged site marker for bacterial blight resistance gene Xa38 in rice. Mol. Breeding 30:607–611. doi:10.1007/s11032-011-9646-y
  • Blair, M. W., Garris, A. J., Iyer, A. S., Chapman, B., Kresovich, S., and McCouch, S. R. 2003. High resolution genetic mapping and candidate gene identification at the Xa5 locus for bacterial blight resistance in rice (Oryza sativa L.). Theor. Appl. Genet. 107:62–73.
  • Blair, M. W., and McCouch, S. R. 1997. Microsatellite and sequence-tagged site markers diagnostic for the rice bacterial leaf blight resistance gene xa-5. Theoret. Appl. Genet. 95:174–184.
  • Blanvillain-Baufumé, S., Reschke, M., Sole, M., Auguy, F., Doucoure, H., Szurek, B., Meynard, D., Portefaix, M., Cunnac, S., Guiderdoni, E., Boch, J., and Koebnik, R. 2017. Targeted promoter editing for rice resistance to Xanthomonas oryzae pv. oryzae reveals differential activities for SWEET14-inducing TAL effectors. Plant Biotechnol. J. 15:306–317. doi:10.1111/pbi.12613
  • Bustamam, M., Tabien, R. E., Suwarno, A., Abalos, M. C., Kadir, T. S., Ona, I., Bernado, M., Veracruz, C. M., and Leung, H. 2002. Asian rice biotechnology network: improving popular cultivars through marker assisted backcrossing by the NARES. In Proceedings of International, Rice Congress, Ed. NARES: Beijing, China.
  • Busungu, C., Taura, S., Sakagami, J. I., and Ichitani, K. 2016. Identification and linkage analysis of a new rice bacterial blight resistance gene from XM14, a mutant line from IR24. Breed. Sci. 66:636–645. doi:10.1270/jsbbs.16062
  • Cao, L. Y., Zhuang, J. Y., Yuan, S. J., Zhan, X. D., Zheng, K. L., and Cheng, S. H. 2003. Hybrid rice resistant to bacterial leaf blight developed by marker assisted selection. Rice Sci. 11:68–70. doi:10.1016/S1672-6308(12)60017-1
  • Century, K. S., Lagman, R. A., Adkisson, M., Morlan, J., Tobias, R., Schwartz, K., Smith, A., Love, J., Ronald, P. C., and Whalen, M. C. 1999. Short communication: developmental control of Xa21-mediated disease resistance in rice. Plant J. 20:231–236.
  • Cheema, K. K., Grewal, N. K., Vikal, Y., Sharma, R., Lore, J. S., Das, A., Bhatia, D., Mahajan, R., Gupta, V., Bharaj, T. S., and Singh, K. 2008. A novel bacterial blight resistance gene from Oryza nivara mapped to 38 kb region on chromosome 4L and transferred to Oryza sativa L. Genet. Res. (Camb) 90:397–407. doi:10.1017/S0016672308009786
  • Chen, H., Wang, S., and Zhang, Q. 2002. New gene for bacterial blight resistance in rice located on chromosome 12 identified from Minghui 63, an elite restorer line. Phytopathology 92:750–754. doi:10.1094/PHYTO.2002.92.7.750
  • Chen, S., Liu, X., Zeng, L. X., Ou, Y., Dong, M., Yang, J.Y., and Zhu, X.Y. 2011. Genetic analysis and molecular mapping of a novel recessive gene Xa34(t) for resistance against Xanthomonas oryzae pv. oryzae. Theor. Appl. Genet. 122:1331–1338.
  • Chen, L. Q., Hou, B. H., Lalonde, S., Takanaga, H., Hartung, M. L., Qu, X. Q., Guo, W. J., Kim, J. G., Underwood, W., Chaudhuri, B., Chermak, D., Antony, G., White, F. F., Somerville, S. C., Mudgett, M. B., and Frommer, W. B. 2010b. Sugar transporters for intercellular exchange and nutrition of pathogens. Nature 468:527–532. doi:10.1038/nature09606
  • Chen, L. Q., Qu, X. Q., Hou, B. H., Sosso, D., Osorio, S., Fernie, A. R., and Frommer, W. B. 2012. Sucrose efflux mediated by SWEET proteins as a key step for phloem transport. Science 335:207–211. doi:10.1126/science.1213351
  • Chen, S., Huang, Z., Zeng, L., Yang, J., Liu, Q., and Zhu, X. 2008. High-resolution mapping and gene prediction of Xanthomonas oryzae pv. oryzae resistance gene Xa7. Mol. Breeding 22:433–441. doi:10.1007/s11032-008-9187-1
  • Chen, S., Lin, X. H., Xu, C. G., and Zhang, Q. 2000. Improvement of bacterial blight resistance of ‘Minghui63’, an elite restorer line of hybrid rice, by molecular marker-assisted selection. Crop Sci. 40:239–244. doi:10.2135/cropsci2000.401239x
  • Chen, S., Xu, C. G., Lin, X. H., and Zhang, Q. 2001. Improving bacterial blight resistance of ‘6078’, an elite restorer line of hybrid rice, by molecular marker-assisted selection. Plant Breed 120:133–137. doi:10.1046/j.1439-0523.2001.00559.x
  • Chen, X., Chern, M., Canlas, P.E., Ruan, D., Jiang, C., and Ronald, P. C. 2010a. An ATPase promotes autophosphorylation of the pattern recognition receptor XA21 and inhibits XA21-mediated immunity. Proc. Natl. Acad. Sci. USA. 107:8029–8034.
  • Chen, X., Zuo, S., Schwessinger, B., Chern, M., Canlas, P. E., Ruan, D., Zhou, X., Wang, J., Daudi, A., Petzold, C. J., Heazlewood, J. L., and Ronald, P. C. 2014. An XA21-associated kinase (OsSERK2) regulates immunity mediated by the XA21 and XA3 immune receptors. Mol. Plant. 7:874–892.
  • Chu, Z., Yuan, M., Yao, J., Ge, X., Yuan, B., Xu, C., Li, X., Fu, B., Li, Z., Bennetzen, J. L., Zhang, Q., and Wang, S. 2006. Promoter mutations of an essential gene for pollen development result in disease resistance in rice. Genes Dev. 20: 1250–1255. doi:10.1101/gad.1416306
  • Chukwu, S. C., Rafii, M. Y., Ramlee, S. I., Ismail, S. I., Oladosu, Y., Okporie, E., Onyishi, G., Utobo, E., Ekwu, L., Swaray, S., and Jalloh, M. 2019. Marker-assisted selection and gene pyramiding for resistance to bacterial leaf blight disease of rice (Oryza sativa L.). Biotechnol. Equip. 33:440–455. doi:10.1080/13102818.2019.1584054
  • Dai, L., Liu, X., Xiao, Y., and Wang, G. 2007. Recent advances in cloning and characterization of disease resistance genes in rice. J. Integrative Plant Biology 49:112–119. doi:10.1111/j.1744-7909.2006.00413.x
  • Das, G., Rao, G. J. N., Varier, M., Prakash, A., and Prasad, D. 2018. Improved Tapaswini having four BB resistance genes pyramided with six genes/QTLs, resistance/tolerance to biotic and abiotic stresses in rice. Sci. Rep. 8:2413. doi:10.1038/s41598-018-20495-x
  • Dash, A. K., Rao, R. N., Rao, G. J. N., Verma, R. L., Katara, J. L., Mukherjee, A. K., Singh, O. N., and Bagchi, T. B. 2016. Phenotypic and marker-assisted genetic enhancement of parental lines of Raja laxmi, an elite rice hybrid. Front. Plant Sci 7:1005. doi:10.3389/fpls.2016.01005
  • Deng, H., Liu, H., Li, X., Xiao, J., and Wang, S. 2012a. A CCCH-type zinc finger nucleic acid-binding protein quantitatively confers resistance against rice bacterial blight disease. Plant Physiol. 158:876–889.
  • Deng, Q. M., Wang, S. Q., Zheng, A. P., Zhang, H. Y., and Li, P. 2006. Breeding rice restorer lines with high resistance to bacterial blight by using molecular marker-assisted selection. Rice Sci. 13:22–28.
  • Deng, Z. X., Peng, Z. H., Yao, C. R., Yun, Z. J., Hua, C. H., and Yong, C. L. 2012b. Breeding of R8012, a rice restorer line resistant to blast and bacterial blight through marker-assisted selection. Rice Sci. 19:29–35.
  • Devadath, S. 1983. A strain of Oryza barthii, an African wild rice immune to bacterial blight of rice. Curr. Sci. 52:27–28.
  • Dokku, P., Das, K. M., and Rao, G. J. N. 2013a. Genetic enhancement of host plant-resistance of the Lalat cultivar of rice against bacterial blight employing marker-assisted selection. Biotechnol. Lett. 35:1339–1348. doi:10.1007/s10529-013-1212-8
  • Dokku, P., Das, K. M., and Rao, G. J. N. 2013b. Pyramiding of four resistance genes of bacterial blight in Tapaswini, an elite rice cultivar, through marker-assisted selection. Euphytica 192:87–96. doi:10.1007/s10681-013-0878-2
  • Ellur, R. K., Khanna, A., Krishnan, G. S., Bhowmick, P. K., Vinod, K. K., Nagarajan, M., Mondal, K., Singh, N. K., Singh, K., Prab-Hu, K. V., and Singh, A. K. 2016. Marker-aided Incorporation of Xa38, a novel bacterial blight resistance gene, in PB1121 and comparison of its resistance spectrum with Xa13+Xa21. Sci. Rep. 6:29188. doi:10.1038/srep29188
  • Eom, J.-S., Chen, L.-Q., Sosso, D., Julius, B. T., Lin, I. W., Qu, X.-Q., Braun, D. M., and Frommer, W. B. 2015. SWEETs, transporters for intracellular and intercellular sugar translocation. Curr. Opin. Plant Biol. 25:53–62.
  • Ezuka, A., Horino, O., Toriyama, K., Shinoda, H., and Morinaka, T. 1975. Inheritance of resistance of rice variety Wase Akikoku 3 to Xanthomonas oryzae. Bull. Tokai-Kinki Nat. Agric. Exp. Stn. 28:124–130.
  • Gao, D. Y., Liu, M. A., Zhou, A. H., Cheng, Y., Xiang, Y. H., Sun, L. H., and Zhai, W. X. 2005. Molecular mapping of a bacterial blight resistance gene Xa-25 in rice. J. Genet. Genom. 32:183–188.
  • Gao, D. Y., Xu, Z. G., Chen, Z. Y., Sun, L. H., Sun, Q. M., Lu, F., Hu, B. S., Liu, Y. F., and Tang, L. H. 2001. Identification of a new gene for resistance to bacterial blight in a somaclonal mutant HX-3 (indica). Rice Genet. News Lett. 18:66.
  • Gidamo, G. H., and Kumaravadivel, N. 2015. Marker-assisted introgression of broad spectrum bacterial blight resistance gene xa33 to co43, a salt and alkaline soil tolerant indica rice variety. Trends Biosci. 8:2136–2142.
  • Gopalakrishnan, S., Sharma, R. K., Rajkumar, K. A., Joseph, M., Singh, V. P., Singh, A. K., Bhat, K. V., Singh, N. K., and Mohapatra, T. 2008. Integrating marker assisted background analysis with foreground selection for identification of superior bacterial blight resistant recombinants in Basmati rice. Plant Breed 127:131–139. doi:10.1111/j.1439-0523.2007.01458.x
  • Goto, T., Matsumoto, T., Furuya, N., Tsuchiya, K., and Yoshimura, A. 2009. Mapping of bacterial light resistance gene Xa11 on rice chromosome 3. JARQ 43:221–225. doi:10.6090/jarq.43.221
  • Gorakhanath, K. P., Francies, R. M., and Patil, N. D. 2017. Pyramiding of bacterial blight resistance genes in rice variety Jyothi (Ptb 39) through marker assisted selection. ORYZA-Int J Rice 54:367–375. doi:10.5958/2249-5266.2017.00051.0
  • Gu, K., Sangha, J.S., Li, Y., and Yin, Z. 2008. High-resolution genetic mapping of bacterial blight resistance gene Xa10. Theor. Appl. Genet. 116:155–163.
  • Gu, K., Tian, D., Yang, F., Wu, L., Sreekala, C., Wang, D., Wang, G. L., and Yin, Z. 2004. High-resolution genetic mapping of Xa27(t), a new bacterial blight resistance gene in rice, Oryza sativa L. Theor. Appl. Genet. 108:800–807. doi:10.1007/s00122-003-1491-x
  • Gu, K., Yang, B., Tian, D., Wu, L., Wang, D., Sreekala, C., Yang, F., Chu, Z., Wang, G.L., White, F.F., and Yin, Z. 2005. R gene expression induced by a type-III effector triggers disease resistance in rice. Nature 435:1122–1125.
  • Guan, Y. F., Huang, X. Y., Zhu, J., Gao, J. F., Zhang, H. X., and Yang, Z. N. 2008. RUPTURED POLLEN GRAIN1, a member of the MtN3/saliva gene family, is crucial for exine pattern formation and cell integrity of microspores in Arabidopsis. Plant Physiol. 147:852–863.
  • Guo, S. B., Zhang, D. P., and Lin, X. H. 2010. Identification and mapping of a novel bacterial blight resistance gene Xa35(t) originated from Oryza minuta. Sci. Agric. Sin. 43:2611–2618.
  • Guvvala, L. D., Koradi, P., Shenoy, V., and Marella, L. S. 2013. Improvement of resistance to bacterial blight through marker assisted backcross breeding and field validation in rice (Oryza sativa). Res. J. Biol. 1:52–66.
  • Hairmansis, A., Warsono, S., Yullianida, A., and Utami, D. W. 2020. Introgression of bacterial blight resistance gene Xa7 into popular Indonesian rice varieties through backcross and molecular breeding. IOP Conf. Ser. Earth Environ. Sci. 457:1–11. doi:10.1088/1755-1315/457/1/012050
  • Harushima, Y., Yano, M., Shomura, A., Sato, M., Shimano, T., Kuboki, Y., Yamamoto, T., Lin, S. Y., Antonio, B. A., Parco, A., Kajiya, H., Huang, N., Yamamoto, K., Nagamura, Y., Kurata, N., Khush, G. S., and Sasaki, T. 1998. A high-density rice genetic linkage map with 2275 markers using a single F2 population. Genetics 148:479–494.
  • He, Q., Li, D., Zhu, Y., Tan, M., Zhang, D., and Lin, X. 2006. Fine mapping of Xa2, a bacterial blight resistance gene in rice. Mol. Breeding 17:1–6. doi:10.1007/s11032-005-8698-2
  • Høiby, T., Zhou, H., Mitsiou, D. J., and Stunnenberg, H. G. 2007. A facelift for the general transcription factor TFIIA. Biochim. Biophys. Acta. 1769:429–436.
  • Hsu, Y., Streubel, J., Balzergue, S., Champion, A., Boch, J., Koebnik, R., Feng, J., Verdier, V., and Szurek, B. 2011. Colonization of rice leaf blades by an African strain of Xanthomonas oryzae pv. oryzae depends on a new TAL effector that induces the rice nodulin-3 Os11N3 gene. Mol. Plant Microbe Interact. 24:1102–1113. doi:10.1094/MPMI-11-10-0254
  • Hsu, Y. C., Chiu, C. H., Yap, R., Tseng, Y. C., and Wu, Y. P. 2020. Pyramiding bacterial blight resistance genes in Tainung 82 for broad-spectrum resistance using marker-assisted selection. IJMS. 21:1281. doi:10.3390/ijms21041281
  • Hu, K., Cao, J., Zhang, J., Xia, F., Ke, Y., Zhang, H., Xie, W., Liu, H., Cui, Y., Cao, Y., Sun, X., Xiao, J., Li, X., Zhang, Q., and Wang, S. 2017. Improvement of multiple agronomic traits by a disease resistance gene via cell wall reinforcement. Nat. Plants. 3:17009.
  • Huang, B., Xu, J. Y., Hou, M. S., Ali, J., and Mou, T. M. 2012. Introgression of bacterial blight resistance genes Xa7, Xa21, Xa22 and Xa23 in to hybrid rice restorer lines by molecular marker-assisted selection. Euphytica 187:449–459. doi:10.1007/s10681-012-0758-1
  • Huang, N., Angeles, E. R., Domingo, J., Magpantay, G., Singh, S., Zhang, G., Kumaravadivel, N., Bennett, J., and Khush, G. S. 1997. Pyramiding of bacterial blight resistance genes in rice: marker-assisted selection using RFLP and PCR. Theor. Appl. Genet. 95:313–320. doi:10.1007/s001220050565
  • Hutin, M., Sabot, F., Ghesquière, A., Koebnik, R., and Szurek, B. 2015. A knowledge-based molecular screen uncovers a broad-spectrum OsSWEET14 resistance allele to bacterial blight from wild rice. Plant J. 84:694–703.
  • International Rice Research Institute. 2013. Rice Almanac. IRRI: Los Baños, Philippines, pp 283.
  • Ji, Z., Ji, C., Liu, B., Zou, L., Chen, G., and Yang, B. 2016. Interfering TAL effectors of Xanthomonas oryzae neutralize R-gene-mediated plant disease resistance. Nat. Commun. 7:13435
  • Jiang, G. H., Xia, Z. H., Zhou, Y. L., Wan, J., Li, D. Y., Chen, R. S., Zhai, W. X., and Zhu, L. H. 2006. Testifying the rice bacterial blight resistance gene Xa5 by genetic complementation and further analyzing Xa5 (Xa5) in comparison with its homolog TFIIAgamma1. Mol. Genet. Genomics 275:354–366.
  • Jiang, N., Yan, J., Liang, Y., Shi, Y., He, Z., Wu, Y., Zeng, Q., Liu, X., and Peng, J. 2020. Resistance Genes and their Interactions with bacterial blight/leaf streak pathogens (Xanthomonas oryzae) in rice (Oryza sativa L.) – an updated review. Rice (NY) 13:3–12. doi:10.1186/s12284-019-0358-y
  • Jin, X. W., Wang, C. L., Yang, Q., Jiang, Q. X., Fan, Y. L., Liu, G. C., and Zhao, K. J. 2007. Breeding of near-isogenic line CBB30 and molecular mapping of Xa30(t), a new resistance gene to bacterial blight in rice. Sci. Agric. Sin. 40:1094–1100.
  • Joseph, M., Gopalakrishnan, S., Sharma, R. K., Singh, V. P., Singh, A. K., Singh, N. K., and Mohapatra, T. 2004. Combining bacterial blight resistance and Basmati quality characteristics by phenotypic and molecular marker-assisted selection in rice. Mol. Breeding 13:377–387. doi:10.1023/B:MOLB.0000034093.63593.4c
  • Kabir, M., Iftekharuddaula, K., Khan, M., Mian, M., and Ivy, N. 2017. Marker assisted introgression of bacterial blight resistant gene into submergence tolerance rice variety BRRI dhan52. Bangladesh J. Agric. Res. 42:403–411. doi:10.3329/bjar.v42i3.34499
  • Kaji, R., and Ogawa, T. 1995. Identification of the located chromosome of the resistance gene, Xa-7 to bacterial leaf blight in rice [in Japanese]. Breed. Sci. 45:79.
  • Kim, S. M. 2018. Identification of novel recessive gene Xa44(t) conferring resistance to bacterial blight races in rice by QTL linkage analysis using an SNP chip. Theor. Appl. Genet. 131:2733–2743. doi:10.1007/s00122-018-3187-2
  • Kim, S. M., and Reinke, R. F. 2019. A novel resistance gene for bacterial blight in rice, Xa43(t) identified by GWAS, confirmed by QTL mapping using a bi-parental population. PLoS One. 14:e0211775. doi:10.1371/journal.pone.0211775
  • Kim, S. M., Suh, J. P., Qin, Y., Noh, T. H., Reinke, R. F., and Jena, K. K. 2015. Identification and fine-mapping of a new resistance gene, Xa40, conferring resistance to bacterial blight races in rice (Oryza sativa L.). Theor. Appl. Genet. 128:1933–1943. doi:10.1007/s00122-015-2557-2
  • Khush, G. S., and Angeles, E. R. 1999. A new gene for resistance to race 6 of bacterial blight in rice, Oryza sativa L. Rice Genet. Newslett. 16:92–93.
  • Khush, G. S., Bacalangco, E., and Ogawa, T. 1990. A new gene for resistance to bacterial blight from Oryza longistaminata. Rice Genet. Newslett. 7:121–122.
  • Khush, G. S., Mackill, D. J., and Sidhu, G. S. 1989. Breeding rice for resistance to bacterial blight. In Bacterial Blight of Rice. International Rice Research Institute: Manila, Philippines, pp 207–217.
  • Korinsak, S., Sriprakhon, S., Sirithanya, P., Jairin, J., Korinsak, S., Vanavichit, A., and Toojinda, T. 2009. Identification of microsatellite markers (SSR) linked to a new bacterial blight resistance gene xa33(t) in rice cultivar ‘Ba7’. Maejo Int. J Sci. Tech. 3:235–247.
  • Krishnakumar, R., and Kumaravadivel, N. 2018. Marker-assisted selection for biotic stress (bacterial leaf blight and gall midge) tolerance in Bc4F4 generation of rice (Oryza sativa L.). Electron. J. Plan. Breed. 9:275–282. doi:10.5958/0975-928X.2018.00032.7
  • Kumar, V. A., Balachiranjeevi, C. H., Naik, S. B., Rambabu, R., Rekha, G., Harika, G., Hajira, S. K., Pranathi, K., Vijay, S., Anila, M., Mahadevaswamy, H. K., Kousik, M., Yugander, A., Aruna, J., HariPrasad, A. S., Madhav, M. S., Laha, G. S., Balachandran, S. M., Prasad, M. S., Babu, V. R., and Sundaram, R. M. 2016. Development of gene-pyramid lines of the elite restorer line, RPHR-1005 possessing durable bacterial blight and blast resistance. Front. Plant Sci. 7:1195. doi:10.3389/fpls.2016.01195
  • Leach, J. E., Leung, H., and Tisserat, N. A. 2014. Plant disease and resistance. In Encyclopedia of Agriculture and Food Systems, Vol. 4; Van Alfen, N. K., Ed. Elsevier: Amsterdam, pp 360–374.
  • Lee, C. K., Lee, B. M., and Cho, J. Y. 2008. Identification of new internal promoters of the Xanthomonas oryzae pathovar oryzae gum gene cluster. Biotechnol. Lett. 30:521–527. doi:10.1007/s10529-007-9571-7
  • Lee, K. S., Rasabandith, S., Angeles, E. R., and Khush, G. S. 2003. Inheritance of resistance to bacterial blight in 21 cultivars of rice. Phytopathology 93:147–152. doi:10.1094/PHYTO.2003.93.2.147
  • Li, P., Long, J. Y., Huang, Y. C., Zhang, Y., and Wang, J. S. 2004. AvrXa3: a novel member of avrBs3 gene family from Xanthomonas oryzae pv. oryzae has a dual function. Prog Nat Sci 14:767–773.
  • Li, Z. K., Luo, L. J., Mei, H. W., Paterson, A. H., Zhao, X. H., Zhang, D. B., Wang, Y. P., Yu, X. Q., Zhu, L., Stansel, J. W., and Ying, C. S. 1999. A “defeated” rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv. oryzae. Mol. & General Genet 261:58–63.
  • Librojo, V., Kaufman, H. E., and Khush, G. S. 1976. Genetic analysis of bacterial blight resistance in four varieties of rice. Sabrao J. 8:105–110.
  • Lin, X. H., Zhang, D. P., Xie, Y. F., Gao, H. P., and Zhang, Q. 1996. Identification and mapping of a new gene for bacterial blight resistance in rice based on RFLP markers. Phytopathology 86:1156–1159. doi:10.1094/Phyto-86-1156
  • Liu, Q., Yuan, M., Zhou, Y., Li, X., Xiao, J., and Wang, S. 2011. A paralog of the MtN3/saliva family recessively confers race-specific resistance to Xanthomonas oryzae in rice. Plant. Cell Environ. 34:1958–1969.
  • Liu, Y., Cao, Y., Zhang, Q., Li, X., and Wang, S. 2018. A cytosolic triosephosphate isomerase is a key component in XA3/XA26-mediated resistance. Plant Physiol. 178:923–935.
  • Luo, Y., Sangha, J., Wang, S., Zefu, L., Yang, J., and Yin, Z. 2012. Marker-assisted breeding of Xa4, Xa21 and Xa27 in the restorer lines of hybrid rice for broad-spectrum and enhanced disease resistance to bacterial blight. Mol. Breeding 30:1601–1610. doi:10.1007/s11032-012-9742-7
  • Luo, Y., Zakaria, S., Basyah, B., Ma, T., Li, Z., Yang, J., and Yin, Z. 2014. Marker-assisted breeding of Indonesia local rice variety Siputeh for semi-dwarf phonetype, good grain quality and disease resistance to bacterial blight. Rice (NY) 7:33. doi:10.1186/s12284-014-0033-2
  • Luo, Y. C., Wang, S. H., Li, C. Q., Wang, D. Z., Wu, S., and Du, S. Y. 2003. Breeding of the photo-period-sensitive genetic male-sterile line 3418S resistant to bacterial blight in rice by molecular marker-assisted selection. Acta Agron. Sin. 29:402–407.
  • Luo, Y. C., Wang, S. H., Li, C. Q., Wu, S., Wang, D. Z., and Du, S. Y. 2004. Improvement of resistance to bacterial blight by marker-assisted selection in a wide compatibility restorer line of hybrid rice. Rice Sci. 11:231–237.
  • Luu, D. D., Joe, A., Chen, Y., Parys, K., Bahar, O., Pruitt, R., Chan, L. J. G., Petzold, C. J., Long, K., Adamchak, C., Stewart, V., Belkhadir, Y., and Ronald, P. C. 2019. Biosynthesis and secretion of the microbial sulfated peptide RaxX and binding to the rice XA21 immune receptor. Proc. Natl. Acad. Sci. 116:8525–8534. doi:10.1073/pnas.1818275116
  • Mew, T. W., Alvarez, M. A., Leach, E. J., and Swings, J. 1993. Focus on bacterial blight of rice. Plant Dis. 77:5–12. doi:10.1094/PD-77-0005
  • Mi, J., Yang, D., Chen, Y., Jiang, J., Mou, H., Huang, J., Ouyang, Y., and Mou, T. 2018. Accelerated molecular breeding of a novel P/TGMS line with broad-spectrum resistance to rice blast and bacterial blight in two-line hybrid rice. Rice (NY) 11:11.
  • Miao, L. L., Wang, C. L., Zheng, C. K., Che, J. Y., Gao, Y., Wen, Y. C., Li, G. Q., and Zhao, K. J. 2010. Molecular mapping of anew gene for resistance to rice bacterial blight. Sci. Agric. Sin. 43:3051–3058.
  • Mir, G. N., and Khush, G. S. 1990. Genetics of resistance to bacterial blight in rice cultivar DV86. Crop Res. 3:194–198.
  • Monaghan, J., and Zipfel, C. 2012. Plant pattern recognition receptor complexes at the plasma membrane. Curr. Opin. Plant Biol. 15:349–357.
  • Natarajkumar, P., Sujatha, K., Laha, G. S., Viraktamath, B. C., Reddy, C. S., Mishra, B., Balachandran, S. M., Ram, T., Srinivasarao, K., Hari, Y., and Sundaram, R. M. 2010. Identification of a dominant bacterial blight resistance gene from Oryza nivara and its molecular mapping. Rice Genet. Newslett. 25:54–56.
  • Nayak, D. K., Pandit, E., Mohanty, S., Barik, D. P., and Pradhan, S. K. 2015. Marker assisted selection in back cross progenies for transfer of bacterial leaf blight resistance genes into a popular lowland rice cultivar. Oryza 52:163–168.
  • Neelam, K., Mahajan, R., Gupta, V., Bhatia, D., Gill, B., Komal, R., Lore, J. S., Mangat, G., and Singh, K. 2019. High-resolution genetic mapping of a novel bacterial blight resistance gene xa-45(t) identified from Oryza glaberrima and transferred to Oryza sativa. Theor. Appl. Genet. 135:689–705. doi:10.1007/s00122-019-03501-2
  • Nguyen, H. T., Vu, H. Q., Mai, T. V., Nguyen, T. T., Vu, L. D., Nguyen, T. T., Nguyen, L. V., Vu, H. T. T., Nong, H. T., Dinh, T. N., Toshitsugu, N. and VU, L. V. 2018. Marker-assisted selection of Xa21 conferring resistance to bacterial leaf blight in indica rice cultivar LT2. Rice Sci. 25(1):52–56. doi:10.1016/j.rsci.2017.08.004
  • Nguyen, T. T., Vu, H. Q., Mai, V. T., Vu, Đ. L., Nakano, T., Nguyen, T. H., Nong, T. H., Nguyen, Q. T., Nguyen, V. L., Nguyen, V. H., and Vu, V. L. 2018. Marker-assisted pyramiding of Xa21 and Xa7 genes conferring resistance to bacterial leaf blight in indica cultivar Bacthom7. Afr. J. Biotechnol. 17:1389–1396. doi:10.5897/AJB2017.16059
  • Noda, T., and Ohuchi, A. 1989. A new pathogenic race of Xanthomonas campestris pv. oryzae and inheritance of resistance of differential rice variety, Tetep to it. Jpn. J. Phytopathol. 55:201–207. doi:10.3186/jjphytopath.55.201
  • Ochiai, H., Inoue, Y., Takeya, M., Sasaki, A., and Kaku, H. 2005. Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity. JARQ 39:275–287. doi:10.6090/jarq.39.275
  • Ogawa, T. 1993. Methods and strategy for monitoring race distribution and identification of resistance genes to bacterial leaf blight (Xanthomonas campestris pv. oryzae) in rice. Jap. Agri. Res 27:71–80.
  • Ogawa, T. 1996. Monitoring race distribution and identification of genes for resistance to bacterial leaf blight. In Rice Genetics III. Proceedings of the 3rd International Rice Genetics Symposium; Khush, G. S., Ed. IRRI: Manila, Philippines, 456–459.
  • Ogawa, T., Kaku, H., and Yamamoto, T. 1989. Resistance gene of rice cultivar, Asaminori to bacterial blight of rice. Jpn. J. Breed. 39: 196–197.
  • Ogawa, T., and Khush, G. S. 1988. Major genes for resistance to bacterial blight. In Proceedings of the International Workshop on Bacterial Blight of Rice; International Rice Research Institute, Ed., 14th–18th March 1988. IRRI: Manila, Philippines, 177–192.
  • Ogawa, T., Lin, L., Tabien, R.E., and Khush, G.S. 1987. A new recessive gene for resistance to bacterial blight of rice. Rice Genetics Newsletter 4:98–100.
  • Ogawa, T., Morinaka, T., Fujii, K., and Kimura, T. 1978. Inheritance of resistance of rice varieties of Kogyoku and Java14 to bacterial group V of Xanthomonas oryzae. Jpn. J. Phytopathol. 44:137–141. doi:10.3186/jjphytopath.44.137
  • Ogawa, T., and Yamamoto, T. 1986. Inheritance of resistance to bacterial blight in rice. In Rice Genetics. Proceedings of International Rice Genetics Symposium. IRRI: Manila, Philippines, 471–480.
  • Ogawa, T., Yamamoto, T., Khush, G. S., and Mew, T. W. 1986. The relationship between genes Xa-3 and Xa-6 for resistance to bacterial blight. RGN 3:79–80.
  • Oliva, R., and Quibod, I. L. 2017. Immunity and starvation: new opportunities to elevate disease resistance in crops. Curr. Opin. Plant Biol. 38:84–91. doi:10.1016/j.pbi.2017.04.020
  • Olufowote, J. O., Khush, G. S., and Kauffman, H. E. 1977. Inheritance of bacterial blight resistance in Rice. Phytopathology 77:772–775. doi:10.1094/Phyto-67-772
  • Ou, S. H. 1985. Rice Disease, 2nd ed. Common wealth Mycology Institute: Kew, Surrey.
  • Pandey, M. K., Shobha Rani, N., Sundaram, R. M., Laha, G. S., Madhav, M. S., Srinivasa Rao, K., Sudharshan, I., Hari, Y., Varaprasad, G. S., Subba Rao, L. V., Suneetha, K., Sivaranjani, A. K. P., and Viraktamath, B. C. 2013. Improvement of two traditional Basmati rice varieties for bacterial blight resistance and plant stature through morphological and marker-assisted selection. Mol. Breeding 31:239–246. doi:10.1007/s11032-012-9779-7
  • Park, C. J., Peng, Y., Chen, X., Dardick, C., Ruan, D., Bart, R., Canlas, P. E., and Ronald, P. C. 2008. Rice XB15, a protein phosphatase 2C, negatively regulates cell death and XA21-mediated innate immunity. PLoS Biol. 6:1910–1926.
  • Perumalsamy, S., Bharani, M., Sudha, M., Nagarajan, P., Arul, L., Saraswathi, R., Balasubramanian, P., and Ramalingam, J. 2009. Functional marker-assisted selection for bacterial leaf blight resistance genes in rice (Oryza sativa L.). Plant Breeding 129:400–406. doi:10.1111/j.1439-0523.2009.01705.x
  • Petpisit, V., Khush, G. S., and Kauffman, H. E. 1977. Inheritance of resistance of bacterial blight in rice. Crop Sci. 17:551–554. doi:10.2135/cropsci1977.0011183X001700040018x
  • Porter, B. W., Chittoor, J. M., Yano, M., Sasaki, T., and White, F. F. 2003. Development and mapping of markers linked to the rice bacterial blight resistance gene Xa7. Crop Sci. 43:1484–1492. doi:10.2135/cropsci2003.1484
  • Pradhan, S. K., Nayak, D. K., Pandit, E., Barik, S. R., Mohanty, S. P., Anandan, A., and Reddy, J. N. 2015. Characterization of morpho-quality traits and validation of bacterial blight resistance in pyramided rice genotypes under various hotspots of India. Aust. J. Crop. Sci. 9:127–134.
  • Pradhan, S. K., Nayak, D. K., Pandit, E., Behera, L., Anandan, A., Mukherjee, A. K., Lenka, S., and Barik, D. P. 2016. Incorporation of bacterial blight resistance genes into lowland rice cultivar through marker-assisted backcross breeding. Phytopathology 106:710–718. doi:10.1094/PHYTO-09-15-0226-R
  • Pradhan, S. K., Pandit, E., Pawar, S., Baksh, S. K., Mukherjee, A. K., and Mohanty, S. P. 2019. Development of flash-flood tolerant and durable bacterial blight resistant versions of mega rice variety 'Swarna' through marker-assisted backcross breeding. Sci. Rep. 9:1281010.1038/s41598-019-49176-z.
  • Pruitt, R. N., Schwessinger, B., Joe, A., Thomas, N., Liu, F., Albert, M., Robinson, M. R., Chan, L. J., Luu, D. D., Chen, H., Bahar, O., Daudi, A., De-Vleesschauwer, D., Caddell, D., Zhang, W., Zhao, X., Li, X., Heazlewood, J. L., Ruan, D., Majumder, D., Chern, M., Kalbacher, H., Midha, S., Patil, P. B., Sonti, R. V., Petzold, C. J., Liu, C. C., Brodbelt, J. S., Felix, G., and Ronald, P. C. 2015. The rice immune receptor XA21 recognizes a tyrosine-sulfated protein from a Gram-negative bacterium. Sci. Adv. 1:e1500245.
  • Qiu, D., Xiao, J., Ding, X., Xiong, M., Cai, M., Cao, Y., Li, X., Xu, C., and Wang, S. 2007. OsWRKY13 mediates rice disease resistance by regulating defense-related genes in salicylate- and jasmonate-dependent signaling. Mol. Plant Microbe Interact. 20:492–499.
  • Qiu, D., Xiao, J., Xie, W., Cheng, H., Li, X., and Wang, S. 2009. Exploring transcriptional signaling mediated by OsWRKY13, a potential regulator of multiple physiological processes in rice. BMC Plant Biol. 9:74. doi:10.1186/1471-2229-9-74
  • Quirino, B. F., Normanly, J., and Amasino, R. M. 1999. Diverse range of gene activity during Arabidopsis thaliana leaf senescence includes pathogen-independent induction of defense-related genes. Plant Mol. Biol. 40:267–278. doi:10.1023/A:1006199932265
  • Raina, M., Salgotra, R. K., Pandotra, P., Rathour, R., and Singh, K. 2019. Genetic enhancement for semi-dwarf and bacterial blight resistance with enhanced grain quality characteristics in traditional basmati rice through marker-assisted selection. C R Biol. 342: 142–153. doi:10.1016/j.crvi.2019.04.004
  • Rajpurohit, D., Kumar, R., Kumar, M., Paul, P., Awasthi, A., Osman Basha, P., Puri, A., Jhang, T., Singh, K., and Dhaliwal, H. S. 2011. Pyramiding of two bacterial blight resistance and a semi-dwarfing gene in Type 3 Basmati using marker-assisted selection. Euphytica 178:111–126. doi:10.1007/s10681-010-0279-8
  • Ram, T., Laha, G. S., Gautam, S. K., Ram , Deen , Madhav, M. S., Brar, D. S., and Viraktamath, B. C. 2010. Identification of a new gene introgressed from Oryza brachyantha with broad-spectrum resistance to bacterial blight of rice in India. Rice Genet. Newslett. 25:57.
  • Ramalingam, J., Savitha, P., Alagarasan, G., Saraswathi, R., and Chandrababu, R. 2017. Functional marker assisted improvement of stable cytoplasmic male sterile lines of rice for bacterial blight resistance. Front Plant Sci. 8:113110.3389/fpls.2017.01131.
  • Ramalingam, J., Vera-Cruz, C. M., Kukreja, K., Chittoor, J. M., Wu, J. L., Lee, S. W., Baraoidan, M., George, M. L., Cohen, M. B., Hulbert, S. H., Leach, J. E., and Leung, H. 2003. Candidate defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice. Mol. Plant. Microbe Interact. 16:14–24. doi:10.1094/MPMI.2003.16.1.14
  • Rao, K. K., Jena, K. K., and Lakshminarasu, M. 2003. Molecular tagging of a new bacterial blight resistance gene in rice using RAPD and SSR markers. Plant Breed. 209:16–17.
  • Rao, S. R., Priyanka, M., Ajay Kumar, M., Ramanaiah, C., Yashwanth, B., Madan Mohan, K., Vidya Chandra, B., Venkateshwarlu, V., Gandhi, D., Rao, N. J. M., Rao, G. V. R., Raj, M. S. M., and Shanti, M. L. 2017. Marker-assisted breeding for bacterial blight resistance in parental lines of hybrid rice. J Plant Pathol. 99:691–701.
  • Ray, D. K., Mueller, N. D., West, P. C., and Foley, J. A. 2013. Yield trends are insufficient to double global crop production by 2050. PLoS One. 8:e66428.
  • Ronald, P. C., Albano, B., Tabien, R., Abenes, L., Wu, K. S., McCouch, S., and Tanksley, S. D. 1992. Genetic and physical analysis of the rice bacterial blight disease resistance locus, Xa21. Mol. Gen. Genet. 236:113–120.
  • Ruengphayak, S., Chaichumpoo, E., Phromphan, S., Kamolsukyunyong, W., Sukhaket, W., Phuvanartnarubal, E., Korinsak, S., Korinsak, S., and Vanavichit, A. 2015. Pseudo-backcrossing design for rapidly pyramiding multiple traits into a preferential rice variety. Rice (NY) 8:7. doi:10.1186/s12284-014-0035-0
  • Sabar, M., Akhter, M., Bibi, T., Riaz, A., Haider, Z., Khan, R., and Bibi, A. 2019. Basmati rice lines development carrying multiple bacterial blight resistance genes pyramided using the marker-assisted backcross breeding approach. Mol. Breeding 39:1–12. doi:10.1007/s11032-019-1047-7
  • Sagar, V., Dhawan, G., Gopala Krishnan, S., Vinod, K. K., Ellur, R. K., Mondal, K. K., Rathour, R., Prakash, G., Nagarajan, M., Bhowmick, P. K., Bollinedi, H., and Singh, A. K. 2020. Marker assisted introgression of genes governing resistance to bacterial blight and blast diseases into an elite Basmati rice variety, ‘Pusa Basmati 1509’. Euphytica 216:16. doi:10.1007/s10681-019-2549-4
  • Sakaguchi, S. 1967. Linkage studies on the resistance to bacterial leaf blight, Xanthomonas oryzae (Uyeda et Ishiyama) Dowson, in rice (in Japanese. English summary). Bull Nat. Inst. Agric. Sci. Ser. 16:1–18.
  • Salgotra, R., Gupta, B. B., Millwood, R., Balasubramaniam, M., and Stewart, C. N. 2012. Introgression of bacterial leaf blight resistance and aroma genes using functional marker-assisted selection in rice (Oryza sativa L.). Euphytica 187:313–323. doi:10.1007/s10681-011-0599-3
  • Samarasinghe, W. L. G., Gunadasa, A. H., Kurukulasooriya, R., Herath, C. B., Rajapakse, R. M. T., and Fernando, K. K. S. 2008. Pyramiding of bacterial leaf blight resistant genes Xa-21 and Xa-5 in rice by molecular marker assisted breeding. Ann. Sri Lanka Depart. Agric. 10:157–164.
  • Sanchez, A.C., Ilag, L. L., Yang, D., Brar, D. S., Ausubel, F., Khush, G. S., Yano, M., Sasaki, T., Li, Z., and Huang, N. 1999. Genetic and physical mapping of Xa13, a recessive gene bacterial blight resistance gene in rice. Theor. Appl. Genet. 98:1022–1028.
  • Shanti, M. L., and Shenoy, V. V. 2005. Evaluation of resistance genes and their pyramids against rice bacterial leaf blight pathogen Xanthomonas oryzae pv. oryzae. Oryza 42:169–173.
  • Sidhu, G. S., and Khush, G. S. 1978. Dominance reversal of a bacterial blight resistance gene in some rice cultivars. Phytopathology 68:461–463. doi:10.1094/Phyto-68-461
  • Sidhu, G. S., Khush, G. S., and Mew, T. W. 1978. Genetics analysis of bacterial blight resistance in seventy-four cultivars of rice, Oryza sativa L. Theor. Appl. Genet. 53:105–111. doi:10.1007/BF00272687
  • Singh, R. J., Khush, G. S., and Mew, T. W. 1983. A new gene for resistance to bacterial blight in rice. Crop Sci. 23:558–560. doi:10.2135/cropsci1983.0011183X002300030026x
  • Singh, S., Sidhu, J. S., Huang, N., Vikal, Y., Li, Z., Brar, D. S., Dhaliwal, H. S., and Khush, G. S. 2001. Pyramiding three bacterial blight resistance genes (Xa5, Xa13 and Xa21) using marker-assisted selection into indica rice cultivar PR106. Theor. Appl. Genet. 102:1011–1015.
  • Si-Yuan, B., Ming-Pu, T., and Xing-Hua, L. 2010. Genetic mapping of a bacterial blight resistance gene Xa14 in rice. Acta Agron. Sin. 36:422–427. doi:10.3724/SP.J.1006.2010.00422
  • Shiu, S. H., Karlowski, W. M., Pan, R., Tzeng, Y. H., Mayer, K. F., and Li, W. H. 2004. Comparative analysis of the receptor-like kinase family in Arabidopsis and rice. Plant Cell. 16:1220–1234.
  • Song, W. Y., Wang, G. L., Chen, L. L., Kim, H. S., Pi, L.Y., Holsten, T., Gardner, J., Wang, B., Zhai, W. X., Zhu, L. H., Fauquet, C., and Ronald, P. C. 1995. A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21. Science 270:1804–1806.
  • Spoel, S. H., and Dong, X. 2012. How do plants achieve immunity? Defence without specialized immune cells. Nat. Rev. Immunol. 12:89–100.
  • Srinivasan, M. C., Thirumalachar, M. J., and Patel, M. K. 1959. Bacterial blight disease of rice. Curr. Sci. 28:469–470.
  • Streubel, J., Pesce, C., Hutin, M., Koebnik, R., Boch, J., and Szurek, B. 2013. Five phylogenetically close rice SWEET genes confer TAL effector-mediated susceptibility to Xanthomonas oryzae pv. oryzae. New Phytol. 200:808–819. doi:10.1111/nph.12411
  • Suh, J.-P., Jeung, J.-U., Noh, T.-H., Cho, Y.-C., Park, S.-H., Park, H.-S., Shin, M.-S., Kim, C.-K., and Jena, K. K. 2013. Development of breeding lines with three pyramided resistance genes that confer broad-spectrum bacterial blight resistance and their molecular analysis in rice. Rice (NY) 6:5. doi:10.1186/1939-8433-6-5
  • Sugio, A., Yang, B., Zhu, T., and White, F. F. 2007. Two type III effector genes of Xanthomonas oryzae pv. oryzae control the induction of the host genes OsTFIIAgamma1 and OsTFX1 during bacterial blight of rice. Proc. Natl. Acad. Sci. USA. 104:10720–10725.
  • Sun, X., Cao, Y., Yang, Z., Xu, C., Li, X., Wang, S., and Zhang, Q. 2004. Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein. Plant J. 37:517–527. doi:10.1046/j.1365-313X.2003.01976.x
  • Sundaram, R. M., Vishnupriya, M. R., Biradar, S. K., Laha, G. S., Reddy, G. A., Rani, N. S., Sarma, N. P., and Sonti, R. V. 2008. Marker assisted introgression of bacterial blight resistance in Samba Mahsuri, an elite indica rice variety. Euphytica 160:411–422. doi:10.1007/s10681-007-9564-6
  • Sundaram, R. M., Vishnupriya, M. R., Laha, G. S., Rani, N. S., Rao, P. S., Balachandran, S. M., Reddy, G. A., Sarma, N. P., and Sonti, R. V. 2009. Introduction of bacterial blight resistance into Triguna, a high yielding, mid-early duration rice variety. Biotechnol. J. 4:400–407. doi:10.1002/biot.200800310
  • Tagami, Y., and Mizukami, T. 1962. Historical review of the researches on bacterial leaf blight of rice caused by Xanthomonas oryzae (Uyeda and Ishiyama) Dowson, 191.
  • Tan, G. X., Ren, X., Weng, Q. M., Shi, Z. Y., Zhu, L. L., and He, G. C. 2004. Mapping of a new resistance gene to bacterial blight in rice line introgressed from O. officinalis. J. Genet. Genom. 31:724–729.
  • Tan, Z., Zhang, Q., Zhu, L., and Wang, C. 1998. RFLP mapping of a rice bacterial blight resistance gene Xa-14. Hereditas 20:30–33.
  • Tanvi, K. P., Sonam, K. S., Narendra, C. R., Agrawal, T., and Verulkar, S. B. 2018. Pyramiding of three bacterial blight resistance genes in rice cultivar using marker assisted selection. IJBSM. 9:243–248. doi:10.23910/IJBSM/2018.9.2.3C0580
  • Tao, Z., Liu, H., Qiu, D., Zhou, Y., Li, X., Xu, C., and Wang, S. 2009. A pair of allelic WRKY genes play opposite roles in rice-bacteria interactions. Plant Physiol. 151:936–948.
  • Taura, S., Ogawa, T., Tabien, R. E., Khush, G. S., Yoshimura, A., and Omura, T. 1987. The specific reaction of Taichung Native1 to Philippine races of bacterial blight and inheritance of resistance to race 5 (Pxo112). Rice Genet. Newslett. 4:101–102.
  • Taura, S., Ogawa, T., Yoshimura, A., Ikeda, R., and lWATA, N. 1992. Identification of a recessive resistance gene to rice bacterial blight of mutant line XM6, Oryza sativa L. Jpn. J. Breed. 42: 7–13. doi:10.1270/jsbbs1951.42.7
  • Taura, S., Ogawa, T., Yoshimura, A., Ikeda, R., and Omura, T. 1991. Identification of a recessive resistance gene in induced mutant line XM5 of rice to bacterial blight. Jpn. J. Breed 41:427–432. doi:10.1270/jsbbs1951.41.427
  • Tian, D., Wang, J., Zeng, X., Gu, K., Qiu, C., Yang, X., Zhou, Z., Goh, M., Luo, Y., Murata-Hori, M., White, F. F., and Yin, Z. 2014. The rice TAL effector-dependent resistance protein Xa10 triggers cell death and calcium depletion in the endoplasmic reticulum. Plant Cell. 26:497–515. doi:10.1105/tpc.113.119255
  • United States Department of Agriculture (USDA). 2020. Foreign Agricultural Service, Office of Global Analysis. USDA.
  • Vikal, Y., Chawla, H., Sharma, R., Lore, J. S., and Singh, K. 2014. Mapping of bacterial blight resistance gene Xa8 in rice (Oryza sativa L.). Ind. J. Gen. Plnt. Breed. 74:589–595. doi:10.5958/0975-6906.2014.00895.5
  • Wang, C., Fan, Y., Zheng, C., Qin, T., Zhang, X., and Zhao, K. 2014. High-resolution genetic mapping of rice bacterial blight resistance gene Xa23. Mol. Genet. Genom. 289:745–753.
  • Wang, C. L., Zhang, X. P., Fan, Y. L., Gao, Y., Zhu, Q.L., Zheng, C. K., Qin, T. F., Li, Y. Q., Che, J. Y., Zhang, M. W., Yang, B., Liu, Y. G., and Zhao, K. J. 2015. XA23 is an executor R protein and confers broad-spectrum disease resistance in rice. Mol. Plant. 8:290–302.
  • Wang, C. T., Wen, G. S., Lin, X. H., Liu, X. Q., and Zhang, D. P. 2009. Identifiation and fine mapping of the new bacterial blight resistance gene, Xa31(t), in rice. Eur. J. Plant Pathol. 123:235–240. doi:10.1007/s10658-008-9356-4
  • Wang, G., Ding, X., Yuan, M., Qiu, D., Li, X., Xu, C., and Wang, S. 2006. Dual function of rice OsDR8 gene in disease resistance and thiamine accumulation. Plant Mol. Biol. 60:437–449.
  • White, F. F., and Yang, B. 2009. Host and pathogen factors controlling the rice-Xanthomonas oryzae interaction. Plant Physiol. 150:1677–1686. doi:10.1104/pp.109.139360
  • Wongkhamchan, A., Chankaew, O., Monkham, T., Sanitchon, J., and Saksirirat, W. 2018. Broad resistance of RD6 introgression lines with xa5 gene from IR62266 rice variety to bacterial leaf blight disease for rice production in Northeastern Thailand. Agri. Nat. Res 52: 241–245. doi:10.1016/j.anres.2018.09.004
  • Wu, X., Li, X., Xu, C., and Wang, S. 2008. Fine genetic mapping of xa24, a recessive gene for resistance against Xanthomonas oryzae pv. oryzae in rice. Theor. Appl. Genet 106:1467–1472.
  • Xiang, Y., Cao, Y. L., Xu, C. Q., Li, X., and Wang, S. 2006. Xa3, conferring resistance for rice bacterial blight and encoding a receptor kinase-like protein, is the same as Xa26. Theor. Appl. Genet. 113:1347–1355.
  • Xu, J., Jiang, J., Dong, X., Ali, J., and Mou, T. 2012. Introgression of Bacterial Blight (BB) resistance genes Xa7and Xa21into popular restorer line and their hybrids by molecular Marker-Assisted Backcross (MABC) selection scheme. Afr. J. Biotechnol. 11:8225–8233.
  • Yang, B., Sugio, A., and White, F. F. 2006. Os8N3 is a host disease-susceptibility gene for bacterial blight of rice. Proc. Natl. Acad. Sci. USA. 103:10503–10508. doi:10.1073/pnas.0604088103
  • Yoshimura, A., Mew, T. W., Khush, G. S., and Omura, T. 1983. Inheritance of resistance to bacterial blight in rice cultivar Cas 209. Phytopathology 73:1409–1412. doi:10.1094/Phyto-73-1409
  • Yoshimura, S., Nelson, R., Yoshimura, A., Mew, T. W., and Iwata, N. 1992. RFLP mapping of the bacterial blight resistance genes Xa3 and Xa4. Rice Genet. Newslett. 9:136–138.
  • Yoshimura, S., Yamanouchi, U., Katayose, Y., Toki, S., Wang, Z. X., Kono, I., Kurata, N., Yano, M., Iwata, N., and Sasaki, T. 1998. Expression of Xa1, a bacterial blight- resistance gene in rice, is induced by bacterial inoculation. Proc. Natl. Acad. Sci. USA. 95:1663–1668. doi:10.1073/pnas.95.4.1663
  • Yoshimura, S., Yoshimura, A., Iwata, N., McCouch, S., Abenes, M., Baraoidan, M., Mew, T. W., and Nelson, R. J. 1995. Tagging and combining bacterial blight resistance genes in rice using RAPD and RFLP markers. Mol. Breeding 1:375–387. doi:10.1007/BF01248415
  • Yoshimura, S., Umehara, Y., Kurata, N., Nagamura, Y., Sasaki, T., Minobe, Y., and Iwata, N. 1996. Identification of a YAC Clone Carrying the Xa-1 allele, a bacterial blight resistance gene in rice. Theor. Appl. Genet. 93:117–122.
  • Yuan, M., Ke, Y., Huang, R., Ma, L., Yang, Z., Chu, Z., Xiao, J., Li, X., and Wang, S. 2016. A host basal transcription factor is a key component for infection of rice by TALE- carrying bacteria. Elife 5:e19605. doi:10.7554/eLife.19605
  • Zhang, F., Zhuo, D.-L., Zhang, F., Huang, L.-Y., Wang, W.-S., Xu, J.-L., Vera Cruz, C., Li, Z.-K., and Zhou, Y.-L. 2015. Xa39, a novel dominant gene conferring broad-spectrum resistance to Xanthomonas oryzae pv. oryzae in rice. Plant Pathol. 64:568–575. doi:10.1111/ppa.12283
  • Zhang, H., and Wang, S. 2013. Rice versus Xanthomonas oryzae pv. oryzae: a unique pathosystem. Curr. Opin. Plant Biol. 16:188–195.
  • Zhang, G., Angeles, E. R., Abenes, M. L. P., Khush, G. S., and Huang, N. 1996. RAPD and RFLP mapping of the bacterial blight resistance gene Xa13 in rice. Theoret. Appl. Genetics. 93-93:65–70. doi:10.1007/s001220050248
  • Zhang, J., Li, X., Jiang, G., Xu, Y., and He, Y. Q. 2006. Pyramiding of Xa7 and Xa21 for the improvement of disease resistance to bacterial blight in hybrid rice. Plant Breed. 125:600–605. doi:10.1111/j.1439-0523.2006.01281.x
  • Zhang, J., Yin, Z., and White, F. 2015. TAL effectors and the executor R genes. Front Plant Sci. 6:641. doi:10.3389/fpls.2015.00641
  • Zhang, Q. 2009. Genetics and improvement of bacterial blight resistance of hybrid rice in China. Rice Sci. 16:83–92. doi:10.1016/S1672-6308(08)60062-1
  • Zhang, Q., Lin, S. C., Zho, B.Y., Wang, C. L., Yang, W. C., Zhou, Y. L., Li, D. Y., Chen, C. B., and Zhu, L. H. 1998. Identification and tagging a new gene for resistance to bacterial blight (Xanthomonas oryzae pv. oryzae) from O. rufipogon. Rice Genet. Newslett. 15:138–142.
  • Zhang, Q., Wang, C. L., Zhao, K. J., Zhao, Y. L., Caslana, V. C., Zhu, X. D., Jiang, Q. X., and Li, D.Y. 2001. The effectiveness of advanced rice lines with new resistance gene Xa23 to rice bacterial blight. Rice Genet. Newslett. 18:71.
  • Zheng, C. K., Wang, C. L., Yu, Y. J., Liang, Y. T., and Zhao, K. J. 2009. Identification and molecular mapping of Xa32(t), a novel resistance gene for bacterial blight (Xanthomonas oryzae pv. oryzae) in rice. Acta Agron. Sin. 35:1173–1180. doi:10.1016/S1875-2780(08)60089-9
  • Zhi-Juan, J. I., Shu-Dong, I., Yu-Xiang, Z., Yan, L., Chang-Deng, Y., and Qian, Q. 2016. Pyramiding blast, bacterial blight and brown planthopper resistance genes in rice restorer lines. J. Integr. Agric. 15:1432–1440. doi:10.1016/S2095-3119(15)61165-0
  • Zhou, J., Peng, Z., Long, J., Sosso, D., Liu, B., Eom, J. S., Huang, S., Liu, S., Vera-Cruz, C., Frommer, W. B., White, F. F., and Yang, B. 2015. Gene targeting by the TAL effector PthXo2 reveals cryptic resistance gene for bacterial blight of rice. Plant J. 82:632–643. doi:10.1111/tpj.12838
  • Zhou, Y.-L., Uzokwe, V. N.E., Zhang, C.-H., Cheng, L.-R., Wang, L., Chen, K., Gao, X.-Q., Sun, Y., Chen, J.-J., Zhu, L.-H., Zhang, Q., Ali, J., Xu, J.-L., and Li, Z.-K. 2011. Improvement of bacterial blight resistance of hybrid rice in China using the Xa23 gene derived from wild rice (Oryza rufipogon). Crop Prot. 30:637–644. doi:10.1016/j.cropro.2010.12.002
  • Zou, H., Zhao, W., Zhang, X., Han, Y., Zou, L., and Chen, G. 2010. Identification of an avirulence gene, avrxa5, from the rice pathogen Xanthomonas oryzae pv. oryzae. Sci. China Life Sci. 53:1440–1449.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.