Genomic Instability in Patients with Non-Small Cell Lung Cancer Assessed by the Arbitrarily Primed Polymerase Chain Reaction

REFERENCES

• Lantuejoul S., Brambilla E. Prognostic biomarkers in non-small-cell lung carcinoma. Current Diagnostic. Pathology 2006; 12: 418–428
   Google Scholar
• Tonon G., Wong K. K., Maulik G., Brennan C., Feng B., Zhang Y., Khatry D. B., Protopopov A., You M. J., Aguirre A. J., Martin E. S., Yang Z., Ji H., Chin L., DePinho R. A. genomic profiles of human lung cancer. PNAS 2005; 102: 9625–9630
   PubMed Web of Science ®Google Scholar
• Lengauer C., Kinzler K. W., Vogelstein B. Genetic instabilities in human cancers. Nature 1998; 396: 643–649
   PubMed Web of Science ®Google Scholar
• Loeb L. A. Mutator phenotype may be required for multi-stage carcinogenesis. Cancer Res. 1991; 51: 3075–3079
   PubMed Web of Science ®Google Scholar
• Cahill D. P., Kinzler K. W., Vogelstein B., Lengauer C. Genetic instability and Darwinian selection in tumours. Trends Cell Biol. 1999; 9: M57–60
   PubMed Web of Science ®Google Scholar
• Fenech M. Chromosomal biomarkers of genomic instability relevant to cancer. DDT 2002; 7: 1128–1137
   PubMed Web of Science ®Google Scholar
• Breivik J., Gaudernack G. Genomic instability, DNA methylation and natural selection in colorectal carcinogenesis. Semin. Cancer Biol. 1999; 9: 245–254
   PubMed Web of Science ®Google Scholar
• Vogelstein B., Fearon E. R., Kern S. E., Hamilton S. R., Preisinger A. C., Nakamura Y., White R. Allelotype of colorectal carcinomas. Science 1989; 244: 207–211
   PubMed Web of Science ®Google Scholar
• Kallioniemi O. P., Kallioniemi A., Piper J., Isola J., Waldman F. M., Gray J. W., Pinkel D. Optimizing comparative genomic hybridization for analysis of DNA sequence copy number changes in solid tumors. Genes Chromosom. Cancer 1994; 10: 231–243
   PubMed Web of Science ®Google Scholar
• Jass J. R., Mukawa K., Goh H. S., Love S. B. Clinical importance of DNA content in rectal cancer measured by flow cytometry. J. Clin. Pathol. 1994; 42: 254–259
   Google Scholar
• Peinado M. A., Malkhosyan S., Velazquez A., Perucho M. Isolation and characterization of allelic losses and gains in colorectal tumors by arbitrarily primed polymerase chain reaction. Proc. Natl. Acad. Sci. USA 1992; 89: 10065–10069
   PubMed Web of Science ®Google Scholar
• Perucho M. Microsattelite instability: the mutator that mutates the other mutator. Nat. Med. 1996; 2: 630–631
   PubMed Web of Science ®Google Scholar
• Welsh J., McClelland M. Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acid Res. 1990; 18: 7213–7218
   PubMed Web of Science ®Google Scholar
• Chariyalertsak S., Khuhaprema T., Bhudisawasdi B. S., Wongkham S., Petmitr S. Novel DNA amplification on chromosome 2p25.3 and 7q11.23 in cholangiocarcinoma identified by arbitrarily primed polymerase chain reaction. J. Cancer Res. Clin. Oncol. 2005; 131: 821–828
   PubMed Web of Science ®Google Scholar
• Pifarre A., Rossel R., Monzo M., DeAnta J. M., Moreno I., Sanchez J. J., Ariza A., Mate J. L., Martinez E., Sanchez M. Prognostic value of replication errors on chromosomes 2p and 3p in non-small cell lung cancer. Br. J. Cancer 1997; 75: 184–189
   PubMed Web of Science ®Google Scholar
• Zhou X., Kemp B. L., Khuri F. R., Liu D., Lee J. J., Wu W. G., Hong W. K., Mao L. Prognostic implication of microsattelite alteration profiles in early-stage non-small cell lung cancer. Clin. Cancer Res. 2000; 6: 559–565
   PubMed Web of Science ®Google Scholar
• Merlo A., Mabry M., Gabrielson E., Vollmer R., Baylin S. B., Sidransky D. Frequent microsatellite instability in primary small cell lung cancer. Cancer Res. 1994; 54: 2098–2101
   PubMed Web of Science ®Google Scholar
• Chen X. Q., Stroun M., Magnenat J. L., Nicod L. P., Kurt A. M., Lyautey J., Lederrey C., Anker P. Microsatellite alterations in plasma DNA of small cell lung cancer patients. Nat. Med. 1996; 2: 1033–1034
   PubMed Web of Science ®Google Scholar
• Mao L., Hruban R. H., Boyle J. O., Tockman M., Sidransky D. Detection of oncogene mutations in sputum precedes diagnosis of lung cancer. Cancer Res. 1994; 54: 1634–1637
   PubMed Web of Science ®Google Scholar
• Ong T. M., Song B., Qian H. W., Wu Z. L., Whong W. Z. Detection of genomic instability in lung cancer tissues by random amplified polymorphic DNA analysis. Carcinogenesis 1998; 19: 233–235
   PubMed Web of Science ®Google Scholar
• Chapusot C., Martin L., Bouvier A., Bonithon-Kopp C., Ecarnot-Laubriet A., Rageot D., Ponnelle T., Laurent P. P., Faivre J., Paird F. Microsatellite instability and intratumoural heterogeneity in 100 right-sided sporadic colon carcinomas. Br. J. Cancer 2002; 87: 400–404
   PubMed Web of Science ®Google Scholar
• Haruki N., Harano T., Masuda A., Kiyono T., Takahashi T., Tatematsu Y., Shimizu S., Mitsudomi T., Konishi H., Osada H., Fujii Y., Takahashi T. Persistent increase in chromosome instability in lung cancer. Am. J. Pathol. 2001; 159: 1345–1352
   PubMed Web of Science ®Google Scholar
• Nakamura H., Saji H., Idiris A., Kawasaki N., Makoto H., Ogata A., Saijo T., Kato H. Chromosomal instability detected by fluorescence in situ hybridization in surgical specimens of non-small cell lung cancer is associated with poor survival. Clin. Cancer Res. 2003; 9: 2294–2299
   PubMed Web of Science ®Google Scholar
• Travis W. D., Brambilla E., Müller-Hermelink H. K., Harris C. C. WHO classification of tumors. Pathology and genetics of tumors of the lung, pleura, thymus and heart. IARC, Press, Lyon 2004
   Google Scholar
• Sambrook J., Fritch E. F., Maniatis T. Molecular cloning: a laboratory manual. Laboratory Press, Cold Spring Harbor 1989
   Google Scholar
• Cobb B. Optimization of RAPD fingerprinting. Fingerprinting Methods Based on Arbitrarily Primed PCR, M. R. Micheli, R. Bova. Springer Lab Manual, Springer-Verlag, Berlin, Heidelberg 1997
   Google Scholar
• McClelland M., Welsh J. DNA fingerprinting by arbitrarily primed PCR. PCR Methods Appl. 1994; 4: S59–S65
   Google Scholar
• Williams J. G. K., Kubelik A. R., Livak K. J., Rafalski J. A., Tingey S. V. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 1990; 18: 6531–6535
   PubMed Web of Science ®Google Scholar
• Loeb L. A. A mutator phenotype in cancer. Cancer Res. 2001; 61: 3230–3239
   PubMed Web of Science ®Google Scholar
• Vogelstein B., Kinzler K. W. The genetic basis of human cancer. McGraw, Hill, New York 2002
   Google Scholar
• Loeb L. A., Loeb K. R., Anderson J. P. Multiple mutations and cancer. PNAS 2003; 100: 776–781
   PubMed Web of Science ®Google Scholar
• Liloglou T., Maloney P., Xinarianos G., Hulbert M., Walshaw M. J., Gosney J. R., Turnbull L., Field J. K. Cancer-specific genomic instability in bronchial lavage: a molecular tool for lung cancer detection. Cancer Res. 2001; 61: 1624–1628
   PubMed Web of Science ®Google Scholar
• Koziol J., Shadan F. F. Induced genomic instability as a potencila screening test for cancer susceptibily?. Med. Hypotheses 2000; 55: 69–72
   PubMedGoogle Scholar
• Breuer R. H., Postmus P. E., Smit E. F. Molecular bilogy of non-small lung cancer. Respiration 2005; 72: 313–330
   PubMed Web of Science ®Google Scholar
• Shibata D., Navadi W., Salovaara R., Li Z. H., Aaltonen L. A. Somatic microsatellite mutations as molecular tumor clocks. Nat. Med. 1996; 2: 676–681
   PubMed Web of Science ®Google Scholar
• El-Rifai W., Sarlamo-Rikala M., Knuutila A., Miettinen M. DNA copy number changes in development and progression in leiomyosarcomas of soft tissues. Am. J. Pathol. 1998; 153: 985–990
   PubMed Web of Science ®Google Scholar
• Dawkins R. The selfish gene. Oxford, University Press, Oxford 1989
   Google Scholar
• Tomlinson I. P., Novelli M. R., Bodmer W. F. The mutation rate and caner. Proc. Natl. Acad. Sci. USA 1996; 93: 14800–14803
   PubMed Web of Science ®Google Scholar
• Eigen M. The origin of genetic information: viruses as models. Gene 1993; 135: 37–47
   PubMed Web of Science ®Google Scholar
• Diaz L. A., Jr. The current clinical value of genomic instability. Semin. Cancer Biol. 2005; 15: 67–71
   PubMed Web of Science ®Google Scholar
• Gridelli C., Maione P., Comunale D., Rossi A. Adjuvant chemotherapy in elderly patinets with non-small-cell lung cancer. Cancer Control. 2007; 14: 57–62
   PubMedGoogle Scholar
• Davies H., Hunter C., Smith R., Stephens P., Greenman C., Bignell G., Teague J., Butler A., Edkins S., Stevens C., et al. Somatic mutations of the protein kinase gene family in human lung cancer. Cancer Res. 2005; 65: 7591–7595
   PubMed Web of Science ®Google Scholar
• Tam I. Y. S., Chung L. P., Suen W. S., Wang E., Wong M. C. M., Ho K. K., Lam W. K., Chiu S. W., Girard L., Minna J. D., Gazdar A. F., Wong M. P. Distinct epidermal growth factor receptor and KRAS mutation patterns in non-small cell lung cancer patients with different tobacco exposure and clinicopathologic features. Clin. Cancer Res. 2006; 12: 1647–1653
   PubMed Web of Science ®Google Scholar
• Wong M. P., Lam W. K., Wang E., Chiu S. W., Lam C. L., Chung L. P. Primary adenocarcinomas of the lung in nonsmokers show a distinct pattern of allelic imbalance. Cancer Res. 2002; 62: 4464–4468
   PubMed Web of Science ®Google Scholar