Structure and Energetics in the Complexes of a Double-Stranded B-DNA Dodecamer with Netropsin Derivatives of a Tricationic Water-Soluble Porphyrin: a Theoretical Investigation

References and Footnotes

• Krivstova , M. , Moroschkina , E. , Glibin , E. and Frisman , E. 1984 . Mol. Biol. , 18 : 950 (a), (b) Dervan, P.B., Science 232, 464 (1986))
   Google Scholar
• Helbecque , N. , Bernier , J. and Hénichart , J. P. 1985 . Biochem. J. , 278 : 1 (a), (b) Eliadis, A., Philips, D. R., Reiss, J.A. and Skorobogaty, A., J. Chem. Soc. Chem. Commun., 1049 (1988). (c) Bailly, C., Helbecque, N., Hénichart, J.P., Colson, P., Houssier, C., Rao, K.E., Shea, R.G. and Lown, J.W., J. Mol. Recognition 3, 26 (1990)
   Google Scholar
• Bailly , C. , O'Huigin , C. , Houssin , R. , Colson , P. , Houssier , C. , Rivalle , C. , Bisagni , E. , Hénichart , J. P. and Waring , M. J. 1992 . Mol. Pharmacol. , 41 : 845 (a), (b) Bourdouxhe, C., Colson, P., Houssier, C., Sun, J.-S., Montenay-Garrestier, T., Hélène, C., Rivalle, C., Bisagni, E., Waring, M.J., Hénichart, J.P. and Bailly, C., Biochemistry 31, 12385 (1992). (c) Durnez, A., Hélissey, P., Sun, J.S. and Giorgi-Renault S., (to be published)
   PubMed Web of Science ®Google Scholar
• Subra , F. , Carteau , S. , Pager , J. , Paoletti , J. , Paoletti , C. , Auclair , C. , Mrani , D. , Gosselin , G. and Imbach , J. L. 1991 . Biochemistry , 30 : 1642 (a), (b) Goulaouic, H., Carteau, S., Subra, F., Mouscadet, J.- F., Auclair, C., and Sun, J.-S., Biochemistry 33, 1412 (1994)
   PubMed Web of Science ®Google Scholar
• Bailly , C. , Colson , P. , Houssier , C. , Houssier , R. , Houssin , R. , Mrani , D. , Gosselin , G. , Imbach , J. L. , Waring , M. J. , Lown , J. W. and Hénichart , J. P. 1992 . Biochemistry , 31 : 8349
   PubMed Web of Science ®Google Scholar
• Sutherland , J. C. , Duval , J. F. and Griffin , K. P. 1978 . Biochemistry , 17 : 5058 (a), (b) Kopka, M., Yoon, C., Goodsell, D., Pjura, P. and Dickerson, R.E., Proc. Natl. Acad. Sci. USA 82, 1376 (1985). (c) Zimmer, C. and Wähnert, U., Prog. Biophys. Mol. Biol. 47, 31 (1986) and ref. therein;. (d) Zakrzewska, K., Lavery, R. and Pullman, B., J. Biomol. Struct. Dynam. 4, 833 (1987). (e) Lee, M., Chang, D.K., Hartley, J.A., Pon, R.T., Krowicki, K. and Lown, J.W., Biochemistry 27, 445 (1988). (f) Coll, M., Aymanii, J., Van der Marel, G.A., Van Boom, J.H., Rich, A. and Wang, A.H.J., Biochemistry 28, 310 (1989). (g) Pelton, J.G. and Wemmer, D.E., J. Amer. Chem. Soc. 112, 1393 (1990) and ref. therein
   Google Scholar
• Pullman , B. 1989 . Advances in Drug Res. , 18 : 1
   Google Scholar
• Ward , B. , Skorobogaty , A. and Dabrowiak , J. C. 1986 . Biochemistry , 25 : 7827 (a), (b) Fiel, R.J., J. Biomol. Struct. Dyn. 6, 1259 (1989). (c) Gibbs, E.J. and Pasternack, R.F., Seminars in Hemat. 26, 77 (1989). (d) Marzilli, L.G., New J. Chem. 14, 409 (1990). (e) Sari, M., Battioni, J.P., Dupré, D., Mansuy, D. and Le Pecq, J.B., Biochemistry 29, 4205 (1990)
   PubMed Web of Science ®Google Scholar
• Praseuth , D. , Gaudemer , A. , Verlhac , J. B. , Kraljic , I. , Sissoëff , I. and Guillé , E. 1986 . Photochem. Photobiol. , 44 : 717
   PubMed Web of Science ®Google Scholar
• Villanueva , A. , Juarranz , A. , Diaz , V. , Gomez , J. and Canete , M. 1992 . Anti-Cancer Drug Design , 7 : 297
   PubMedGoogle Scholar
• Fiel , R. J. , Beerman , T. A. , Mark , E. H. and Datta-Gupta , N. 1982 . Biochem. Biophys. Res. Commun. , 107 : 1067 (a), (b) Byrnes, R.W., Fiel, R.J. and Datta-Gupta, N., Chem.-Biol. Interact. 67, 225 (1988). (c) Bromley, S.D., Ward, B.W. and Dabrowiak, J.C., Nucleic Acids Res. 14, 9133 (1986). (d) Ward, B., Skorobogaty, A. and Dabrowiak, J.C., Biochemistry 25, 6875 (1986). (e) Fouquet, E., Pratviel, G., Bernardou, J. and Meunier, B., J. Chem. Soc., Chem. Commun., 1169 (1987). (f) Dabrowiak, J.C., Ward, B. and Goodisman, J., Biochemistry 28, 3314 (1989). (g) Bernardou, J., Pratviel, G., Bennis, F., Girardet, M. and Meunier, B., Biochemistry 28, 7268 (1989). (h) Van Atta, R.B., Bernardou, J., Meunier, B. and Hecht, S.M., Biochemistry 29, 4783 (1990). (i) Rodriguez, M., Kodadek, T., Torres, M. and Bard, A.J., Bioconjugate Chemistry 1, 123 (1990)
   PubMed Web of Science ®Google Scholar
• Hui , X. and Gresh , N. 1993 . J. Biomol. Struct. Dynam. , 11 : 333
   PubMed Web of Science ®Google Scholar
• Hui , X. , Gresh , N. and Pullman , B. 1990 . Nucleic Acids Res. , 18 : 110
   Google Scholar
• Anneheim-Herbelin , G. , Perrée-Fauvet , M. , Gaudemer , A. , Hélissey , P. , Giorgi-Renault , S. and Gresh , N. 1993 . Tetrahedron Lett. , 34 : 7263
   Web of Science ®Google Scholar
• Lavery , R. 1988 . DNA Bending and Curvature Edited by: Olson , W. , Sundaralingham , M. , Sarma , M. H. and Sarma , R. H. 191 New-York) : Academic Press . (a), (b) Lavery, R., in Unusual DNA Structures (Harvey, S. and Wells, R., Eds., Springer Verlag, Pergamon Press, New-York), 189 (1988)
   Google Scholar
• Poncin , M. , Hartmann , B. and Lavery , R. 1992 . J. Mol. Biol. , 226 : 775 (a), (b) Boutonnet N., Hui, X. and Zakrzewska, K., Biopolymers 33, 479 (1993)
   PubMed Web of Science ®Google Scholar
• Gresh , N. and Kahn , P. H. 1990 . J. Biomol. Struct. Dynam. , 7 : 1141 (a), (b) Gresh, N. and Kahn, P.H., J. Biomol. Struct. Dynam. 8, 827 (1991)
   PubMed Web of Science ®Google Scholar
• Lavery , R. , Sklenar , H. , Zakrzewska , K. and Pullman , B. 1986 . J. Biomol. Struct. Dynam. , 4 : 989 (a), (b) Lavery, R., Zakrzewska, K. and Pullman, A., J. Comp. Chem. 5, 363 (1984)
   Web of Science ®Google Scholar
• Zhurkin , V. B. , Poltev , V. I. and Florentiev , V. I. 1980 . Mol. Biol. , 14 : 882 (a), (b) Zhurkin, V.B., Poltev, V.I. and Shulyupina, N.V., J. Biomol. Struct. Dynam. 3, 739 (1986)
   Web of Science ®Google Scholar
• Lavery , R. and Sklenar , H. 1988 . J. Biomol. Struct. Dynam. , 6 : 63
   PubMed Web of Science ®Google Scholar
• Pack , G. and Loew , G. H. 1978 . Biochim. Biophys. Acta , 519 : 163 (a), (b) Ornstein, R. and Rein, R., Biopolymers 18, 1277 (1979). (c) Nuss, M., Marsh, F. and Kollman, P.A., J. Amer. Chem. Soc. 101, 825 (1979). (d) Miller, K.J. and Pycior, J.F., Biopolymers 18, 2683 (1979)
   PubMed Web of Science ®Google Scholar
• Coll , M. , Frederick , C. A. , Wang , A. H.-J. and Rich , A. 1987 . Proc. Natl. Acad. Sci. U.S.A. , 84 : 8385
   PubMed Web of Science ®Google Scholar
• Gao , Y-G. , Sriram , M. , Denny , W. A. and Wang , A. H. 1993 . Biochemistry , 32 : 9639
   PubMed Web of Science ®Google Scholar
• Mauffret , O. , Hartmann , B. , Convert , O. , Lavery , R. and Fermandjian , S. 1992 . J. Mol. Biol. , 227 : 852
   PubMed Web of Science ®Google Scholar