References and Footnotes
- Erie , D. A. , Breslauer , K. J. and Olson , W. K. 1993 . Biopolymers , 33 : 75
- Einspahr , H. , Cook , W. J. and Bugg , Ch. E. 1981 . Biochemistry , 20 : 5788
- Klooster , W. T. and Craven , B. M. 1992 . Biopolymers , 32 : 1141
- Gorenstein , D. G. 1994 . Chem. Rev. , 94 : 1315
- McCammon , J. A. and Harvey , S. C. 1987 . Dynamics of proteins and nucleic acids Cambridge : Cambridge University Press .
- Pearlman , D. A. and Kollman , P. A. 1991 . J. Am. Chem. Soc. , 113 : 7167
- Senderowitz , H. , Guarnieri , F. and Still , W. C. 1995 . J. Am. Chem. Soc. , 117 : 8211
- Koča , J. 1994 . J. Mol. Struct. (Theochem) , 308 : 13
- Koča , J. , Pérez , S. and Imberty , A. 1995 . J. Comput. Chem. , 16 : 296
- Koča , J. and Carlsen , P. H.J. 1993 . J. Mol. Struct. , 291 : 271
- Koča , J. , Kǐiž , Z. and Carlsen , P. H.J. 1994 . J. Mol. Struct. (Theochem) , 306 : 157
- MMX is an extended and improved version of Allinger's MM2 developed by J.J. Gajewski and K.E. Gilbert. The program is available from Serena Software, Box 3076, Bloomington, IN 47402–3076, USA
- MM3(92), MM3(94), QCPE, Creative Arts Building 181, Indiana University, Bloomington, IN 47405, USA
- Pearlman , D. A. , Case , D. A. , Cadwell , J. C. , Seibel , G. L. , Singh , Ch. U. , Weiner , P. and Kollman , P. 1991 . AMBER Version 4.0 San Francisco : University of California .
- Koča , J. and Carlsen , P. H.J. unpublished software. (The PANIC program will be made available upon request at e-mail address [email protected])
- Koča , J. 1993 . J. Mol. Struct. , 291 : 255
- Koča , J. and Carlsen , P. H.J. 1992 . J. Mol. Struct. (Theochem) , 257 : 105
- Koča , J. 1995 . J. Mol. Struct. (Theochem) , 343 : 125
- Imberty , A. and Pérez , S. 1994 . Glycobiology , 4 : 351
- Altona , C. and Sundaralingam , M. 1972 . J. Am. Chem. Soc. , 94 : 8205
- Saenger , W. 1984 . Principles of Nucleic Acid Structure New York : Springer Verlag .
- Newton , M. D. 1973 . J. Am. Chem. Soc. , 95 : 256
- Alagona , G. , Ghio , C. and Kollman , P. A. 1985 . J. Am. Chem. Soc. , 107 : 2229
- Jayaram , B. , Mezei , M. and Beveridge , D. L. 1988 . J. Am. Chem. Soc. , 110 : 1691
- Singh , Ch. U. and Kollman , P. A. 1984 . J. Comput. Chem. , 5 : 129
- Pearlman , D. A. and Kim , S.-H. 1985 . J. Biomol. Struct. Dyn. , 3 : 99
- Gabb , H. A. and Harvey , S. C. 1993 . J. Am. Chem. Soc. , 115 : 4218
- Engelsen , S. B. , Koča , J. , Braccini , I. , Hervé du Penhoat , C. and Pérez , S. 1995 . Carbohydrate Research , 276 : 1
- Pearlman , D. A. and Kim , S.-H. 1986 . J. Biomol. Struct. Dyn. , 4 : 69
- Pearlman , D. A. and Kim , S.-H. 1986 . J. Biomol. Struct. Dyn. , 4 : 49
- Matyska , L. and Koča , J. 1994 . J. Comput. Chem. , 15 : 937
- Debold , S. E. and Kollman , P. A. 1993 . J. Comput. Chem. , 3 : 312 cf. for example