Sequencing by Hybridization with the Generic 6-mer Oligonucleotide Microarray: An Advanced Scheme for Data Processing

References and Footnotes

• Lysov , Yu. , Florentiev , V. , Khorlin , A. , Khrapko , K. , Shick , V. and Mirzabekov , A. 1988 . Proc. Acad. Sci. USSR , 303 : 1508 – 1511 .
   Web of Science ®Google Scholar
• Bains , W. and Smith , G. C. 1988 . J. Theor. Biol. , 135 : 303 – 307 .
   PubMed Web of Science ®Google Scholar
• Khrapko , K. , Lysov , Yu. , Khorlin , A. , Shick , V. , Florentiev , V. and Mirzabekov , A. 1989 . FEBS Letters , 256 : 118 – 122 .
   PubMed Web of Science ®Google Scholar
• Drmanac , R. , Labat , L. , Brukner , I. and Crkvenijakov , R. 1989 . Genomics , 4 : 114 – 128 .
   PubMed Web of Science ®Google Scholar
• Khrapko , K. , Lysov , Yu. , Khorlin , A. , Ivanov , I. , Yershov , G. , Vasilenko , S. , Florentiev , V. and Mirzabekov , A. 1991 . DNA Sequence , 1 : 375 – 388 .
   PubMedGoogle Scholar
• Southern , E. M. , Maskos , U. and Elder , J. K. 1992 . Genomics , 13 : 1008 – 1017 .
   PubMed Web of Science ®Google Scholar
• Fodor , S. P.A. , Read , J. L. , Pirrung , M. C. , Stryer , L. , Lu , A. T. and Solas , D. 1991 . Science , 251 : 767773
   Google Scholar
• Yershov , G. , Barsky , V. , Belgovskiy , A. , Kirillov , Eu. , Kreindlin , E. , Ivanov , I. , Parinov , S. , Guschin , D. , Drobishev , A. , Dubiley , S. and Mirzabekov , A. 1996 . Proc. Natl. Acad. Sci. USA , 93 : 4913 – 4918 .
   PubMed Web of Science ®Google Scholar
• Gunderson , K. L. , Huang , X. C. , Morris , M. S. , Lipshutz , R. J. , Lockhart , D. J. and Chee , M. S. 1998 . Genome Research , 8 : 1142 – 1153 .
   PubMed Web of Science ®Google Scholar
• Proudnikov , D. , Kirillov , Eu. , Chumakov , K. , Rezapkin , G. and Mirzabekov , A. (in press)
   Google Scholar
• Drobyshev , A. , Zasedatelev , A. , Yershov , G. and Mirzabekov , A. 1999 . Nucl. Acids Res. , 27 : 4100 – 4105 .
   PubMed Web of Science ®Google Scholar
• Krylov , A. S. , Zasedateleva , O. A. , Prokopenko , D. V. , Rouviere-Yaviv , J. and Mirzabekov , A. D. (in preparation)
   Google Scholar
• Barsky , Ya. , Grammatin , A. , Ivanov , A. , Kreindlin , E. , Kotova , E. , Barskii , V. and Mirzabekov , A. 1998 . J. Opt. Technol. , 65 ( 11 ) : 938 – 941 .
   Web of Science ®Google Scholar
• Fotin , A. , Drobyshev , A. , Proudnikov , D. , Perov , A. and Mirzabekov , A. 1998 . Nucl. Acids Res. , 26 : 1515 – 1521 .
   PubMed Web of Science ®Google Scholar
• Lipshutz , R. J. 1993 . J. Biomol. Struct. Dyn. , 11 : 637 – 653 .
   PubMed Web of Science ®Google Scholar
• Pevzner , P. A. 1989 . J. Biomol. Struct. Dyn. , 7 : 63 – 73 .
   PubMed Web of Science ®Google Scholar
• Belyi , I. and Pevzner , P. A. 1997 . CABIOS , 13 : 205 – 210 .
   PubMedGoogle Scholar
• Drmanac , R. , Labat , L. and Crkvenijakov , R. 1991 . J. Biomol. Struct. Dyn. , 5 : 1085 – 1102 .
   Google Scholar
• Lysov , Yu. , Chernyi , A. , Balaeff , A. , Beattie , K. and Mirzabekov , A. 1994 . J. Biomol. Struct. Dyn. , 11 : 797 – 812 .
   PubMed Web of Science ®Google Scholar
• Lysov , Yu. , Gnuchev , F. , Mironov , A. , Chernyi , A. , Beattie , K. and Mirzabekov , A. 1996 . DNA Sequence , 6 : 65 – 73 .
   PubMed Web of Science ®Google Scholar
• Guschin , D. , Yershov , G. , Zaslavsky , A. , Gemmell , A. , Shick , V. , Proudnikov , D. , Arenkov , P. and Mirzabekov , A. 1997 . Anal. Biochem. , 250 : 203 – 211 .
   PubMed Web of Science ®Google Scholar
• Proudnikov , D. and Mirzabekov , A. 1996 . Nucl. Acids Res. , 24 : 4535 – 4542 .
   PubMed Web of Science ®Google Scholar
• Rao , C. R. 1965 . Linear Statistical Inference and Its Applications New York : Wiley .
   Google Scholar
• Forman , J. E. , Walton , I. D. , Stern , D. , Rava , R. P. and Trulson , M. O. 1998 . ACS Symposium Series , 682 : 206 – 228 .
   Google Scholar
• Sen , D. and Gilbert , W. 1992 . Methods Enzymol. , 211 : 191 – 199 .
   PubMed Web of Science ®Google Scholar
• Williamson , J. R. 1994 . Annu. Rev. Biophys. Biomol. Struct. , 23 : 703 – 730 .
   PubMedGoogle Scholar
• Doktycz , M. J. , Morris , M. D. , Dormady , S. J. , Beattie , K. L. and Jacobson , B. 1995 . J. Biol. Chem. , 270 : 8439 – 8445 .
   PubMed Web of Science ®Google Scholar
• Kaufman , L. 1990 . Finding Groups in Data: An Introduction to Cluster Analysis New York : Wiley .
   Google Scholar
• Schürmann , J. 1996 . Pattern Classification: A Unified View of Statistical and Neural Approaches New York : Wiley .
   Google Scholar
• Foley , D. H. and Summon , J. W. 1975 . IEEE Transactions on Computers , 24 : 281 – 289 .
   Web of Science ®Google Scholar
• Lawler , E. L. , Lenstra , J. K. , Rinnooy-Kan , A. H.G. and Shmoys , D. B. , eds. 1985 . The Traveling Salesman Problem New York : Wiley .
   Google Scholar
• Reinelt , G. 1994 . The Traveling Salesman: Computaional Analysis for TSP Application Berlin : Springer .
   Google Scholar
• Press , W. H. , Flannery , B. P. , Teukolsky , S. A. and Vetterling , W. T. 1988 . Numerical Recipes Cambridge , MA : Cambridge University Press .
   Google Scholar
• Goldberg , D. E. 1989 . Genetic Algorithms in Search, Optimization and Machine Learning Reading , MA : Addison- Wesley .
   Google Scholar
• Whitley , L. D. 1994 . Statistics and Computing , 4 : 65 – 85 .
   Web of Science ®Google Scholar
• Lin , F.-T. , Kao , C.-Y. and Hsu , C.-C. 1993 . IEEE Transactions on Systems, Man, and Cybernetics , 23 : 1752 – 1767 .
   Web of Science ®Google Scholar
• Bishop , C. M. 1995 . Neural Networks and Pattern Recognition Oxford : Oxford University Press .
   Google Scholar
• Claverie , J.-M. , Sauvaget , I. and Bougueleret , L. 1990 . Methods Enzymol. , 183 : 252 – 281 .
   PubMedGoogle Scholar