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Research Articles

Dietary factors and SARS-CoV-2 contagion: in silico studies on modulation of viral and host proteins by spice actives

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Pages 10771-10782 | Received 18 Jul 2020, Accepted 22 Jun 2021, Published online: 13 Jul 2021

References

  • Adedeji, A. O., Singh, K., Calcaterra, N. E., DeDiego, M. L., Enjuanes, L., Weiss, S., & Sarafianos, S. G. (2012). Severe acute respiratory syndrome coronavirus replication inhibitor that interferes with the nucleic acid unwinding of the viral helicase. Antimicrobial Agents and Chemotherapy, 56(9), 4718–4728. https://doi.org/10.1128/AAC.00957-12
  • Adedeji, A. O., Singh, K., Kassim, A., Coleman, C. M., Elliott, R., Weiss, S. R., Frieman, M. B., & Sarafianos, S. G. (2014). Evaluation of SSYA10-001 as a replication inhibitor of SARS, MHV and MERS coronaviruses. Antimicrobial Agents and Chemotherapy, 58, 4894–4898. https://doi.org/10.1128/AAC.02994-14
  • Andersen, K. G., Rambaut, A., Lipkin, W. I., Holmes, E. C., & Garry, R. F. (2020). The proximal origin of SARS-CoV-2. Nature Medicine, 26(4), 450–452. https://doi.org/10.1038/s41591-020-0820-9
  • Berendsen, H. J. C., Postma, J. P. M., van Gunsteren, W. F., & Hermans, J. (1981). Interaction models for water in relation to protein hydration. In B. Pullman (Ed.), Intermolecular Forces. The Jerusalem Symposia on Quantum Chemistry and Biochemistry (Vol. 14). Springer. https://doi.org/10.1007/978-94-015-7658-1_21
  • Friesner, R. A., Banks, J. L., Murphy, R. B., Halgren, T. A., Klicic, J. J., Mainz, D. T., Repasky, M. P., Knoll, E. H., Shelley, M., Perry, J. K., Shaw, D. E., Francis, P., & Shenkin, P. S. (2004). Glide: A new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy. Journal of Medicinal Chemistry, 47(7), 1739–1749. https://doi.org/10.1021/jm0306430
  • Friesner, R. A., Murphy, R. B., Repasky, M. P., Frye, L. L., Greenwood, J. R., Halgren, T. A., Sanschagrin, P. C., & Mainz, D. T. (2006). Extra precision glide: Docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes. Journal of Medicinal Chemistry, 49(21), 6177–6196. https://doi.org/10.1021/jm051256o
  • Fung, T. S., & Liu, D. X. (2014). Coronavirus infection, ER stress, apoptosis and innate immunity. Frontiers in Microbiology, 5, 296. https://doi.org/10.3389/fmicb.2014.00296
  • Gordon, D. E., Jang, G. M., Bouhaddou, M., Xu, J., Obernier, K., White, K. M., O’Meara, M. J., Rezelj, V. V., Guo, J. Z., Swaney, D. L., Tummino, T. A., Hüttenhain, R., Kaake, R. M., Richards, A. L., Tutuncuoglu, B., Foussard, H., Batra, J., Haas, K., Modak, M., … Krogan, N. J. (2020). A SARS-CoV-2 protein interaction map reveals targets for drug repurposing. Nature, 583(7816), 459–468. https://doi.org/10.1038/s41586-020-2286-9
  • Jin, M., Son, K. H., & Chang, H. W. (2011). Luteolin-7-O-glucoside suppresses leukotriene C(4) production and degranulation by inhibiting the phosphorylation of mitogen activated protein kinases and phospholipase Cγ1 in activated mouse bone marrow-derived mast cells. Biological & Pharmaceutical Bulletin, 34(7), 1032–1036. https://doi.org/10.1248/bpb.34.1032
  • Keum, Y. S., & Jeong, Y. J. (2012). Development of chemical inhibitors of the SARS coronavirus: Viral helicase as a potential target. Biochemical Pharmacology, 84(10), 1351–1358. https://doi.org/10.1016/j.bcp.2012.08.012
  • Liu, Z., Li, D.-D., Liu, Y., & Zhu, L.-L. (2017). Apigetrin attenuates high fat diet-induced intestinal inflammation and nonalcoholic fatty liver disease (NAFLD) process. Oncotarget, 5. https://doi.org/10.18632/oncotarget.23544
  • Maatouk, M., Mustapha, N., Mokdad-Bzeouich, I., Chaaban, H., Abed, B., Iaonnou, I., Ghedira, K., Ghoul, M., & Ghedira, L. C. (2017). Thermal treatment of luteolin-7-O-β-glucoside improves its immunomodulatory and antioxidant potencies. Cell Stress & Chaperones, 22(6), 775–785. https://doi.org/10.1007/s12192-017-0808-7
  • Mashhadi, N. S., Ghiasvand, R., Askari, G., Hariri, M., Darvishi, L., & Mofid, M. R. (2013). Anti-oxidative and anti-inflammatory effects of ginger in health and physical activity: Review of current evidence. International Journal of Preventive Medicine, 4(Suppl. 1), S1–S7.
  • Protein Data Bank. (2019). RCSB PDB: Homepage. RCSB PDB.
  • Schrödinger LLC. (2014). Prime, version 3.5. New York.
  • Schrödinger LLC. (2018). Protein Preparation Wizard | Schrödinger. Schrödinger Release 2018–1.
  • Schrödinger LLC. (2020). LigPrep. Schrödinger Release 2020-1: Schrödinger, LLC, New York, NY, 2020.
  • Seth, R. B., Sun, L., & Chen, Z. J. (2006). Antiviral innate immunity pathways. Cell Research, 16(2), 141–147. https://doi.org/10.1038/sj.cr.7310019
  • Shi, J. H., Xie, X., & Sun, S. C. (2018). TBK1 as a regulator of autoimmunity and antitumor immunity. Cellular and Molecular Immunology, 15, 743–745 https://doi.org/10.1038/cmi.2017.165
  • Tanner, J. A., Zheng, B.-J., Zhou, J., Watt, R. M., Jiang, J.-Q., Wong, K.-L., Lin, Y.-P., Lu, L.-Y., He, M.-L., Kung, H.-F., Kesel, A. J., & Huang, J.-D. (2005). The adamantane-derived bananins are potent inhibitors of the helicase activities and replication of SARS coronavirus. Chemistry & Biology, 12(3), 303–311. https://doi.org/10.1016/j.chembiol.2005.01.006
  • Watzl, B., Girrbach, S., & Roller, M. (2005). Inulin, oligofructose and immunomodulation. British Journal of Nutrition, 93(S1), S49–S55. https://doi.org/10.1079/BJN20041357
  • WHO. (2021). Who coronavirus disease dashboard. WHO.
  • Xiao, S., Liu, W., Bi, J., Liu, S., Zhao, H., Gong, N., Xing, D., Gao, H., & Gong, M. (2018). Anti-inflammatory effect of hesperidin enhances chondrogenesis of human mesenchymal stem cells for cartilage tissue repair. Journal of Inflammation, 15(1), 14. https://doi.org/10.1186/s12950-018-0190-y

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