Publication Cover
Chronobiology International
The Journal of Biological and Medical Rhythm Research
Volume 36, 2019 - Issue 8
126
Views
1
CrossRef citations to date
0
Altmetric
Original Articles

Adaptation of the Hierarchical Factor Segmentation method to noisy activity data

ORCID Icon &
Pages 1131-1137 | Received 15 Feb 2019, Accepted 13 May 2019, Published online: 20 Jun 2019

References

  • Cliff N. 1993. Dominance statistics: ordinal analyses to answer ordinal questions. Psychol Bull. 114:494–509.
  • DeCoursey PJ. 1961. Effect of light on the circadian activity rhythm of the flying squirrel, Glaucomys volans. Z Vgl Physiol. 444:31–354.
  • Fushing H, Chen SC, Lee HJ. 2009. Computing circadian rhythmic patterns and beyond: introduction to a new non-Fourier analysis. Comput Stat. 24:409–430.
  • Fushing H, Chen SC, Lee HJ. 2010. Statistical computations on biological rhythms i: dissecting variable cycles and computing signature phases in activity-event time series. J Comput Graph Stat. 19:221–239.
  • Konopka RJ, Benzer S. 1971. Clock mutants of Drosophila melanogaster. Proc Natl Acad Sci USA. 68:2112–2116.
  • Lomb NR. 1976. Least-squares frequency analysis of unequally spaced data. Astrophys Space Sci. 39:447–462.
  • Macbeth G, Razumiejczyk E, Ledesma RD. 2011. Cliff’s Delta Calculator: A non-parametric effect size program for two groups of observations. Univ Psychol. 10:545–555.
  • Pittendrigh CS, Daan S. 1976. A functional analysis of circadian pacemakers in nocturnal rodents. I. The stability and lability of spontaneous frequency. J Comp Physiol. 106:223–252.
  • R Core Team. 2016. R: A language and environment for statistical computing. Vienna (Austria): R Foundation for Statistical Computing. https://www.R-project.org/
  • Roberts SKF. 1960. Circadian activity rhythms in cockroaches. I. The free-running rhythm in steady-state. J Cell Comp Physiol. 55:99–110.
  • Sauer T. 1994. Reconstruction of dynamical systems from interspike intervals. Phys Rev Lett. 72:3811.
  • Scargle JD. 1982. Studies in astronomical time series analysis. II. Statistical aspects of spectral analysis of unevenly spaced data. Astrophys J. 263:835–853.
  • Schuster A. 1898. On the investigation of hidden periodicities with application to a supposed 26 day period of meteorological phenomena. Terr Magn. 3:13–41.
  • Sokolove PG, Bushell WN. 1978. The chi square periodogram: its utility for analysis of circadian rhythms. J Theor Biol. 72:131–160.
  • Spoelstra K, Albrecht U, van der Horst GT, Brauer V, Daan S. 2004. Phase responses to light pulses in mice lacking functional per or cry genes. J Biol Rhythms. 19:518–529.
  • Tackenberg MC, Jones JR, Page TL, Hughey JJ. 2018. Tau-independent phase analysis: a novel method for accurately determining phase shifts. J Biol Rhythms. 33:223–232.
  • Torchiano M. 2017. Package ‘effsize’. Available from: https://cran.r-project.org/web/packages/effsize/index.html

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.