References
- Tompa , P. 2008 . “ Intrinsically disordered proteins ” . In Structural Proteomics and its Impact on the Life Sciences , Edited by: Sussman , J. and Silman , I. 153 – 180 . Singapore : World Scientific .
- Dunker , A.K. , Brown , C.J. , Lawson , J.D. , Iakoucheva , L.M. and Obradovic , Z. 2002 . Intrinsic Disorder and Protein Function . Biochemistry , 41 : 6573 – 6582 .
- Sickmeier , M. , Hamilton , J.A. , LeGall , T. , Vacic , V. , Cortese , M.S. , Tantos , A. , Szabo , B. , Tompa , P. , Chen , J. , Uversky , V.N. , Obradovic , Z. and Dunker , A.K. 2007 . DisProt: the Database of Disordered Proteins . Nucl. Acids Res. , 35 : D786 – D793 . The data bank DisProt (www.disprot.org) lists about 700 disordered proteins; the entry for tau is DP0012
- Tompa , P. 2002 . Intrinsically Unstructured Proteins . Trends Biochem. Sci. , 27 : 527 – 533 .
- Mylonas , E. , Hascher , A. , Bernadò , P. , Blackledge , M. , Mandelkow , E. and Svergun , D.I. 2008 . Domain Conformation of Tau Protein Studied by Solution Small-Angle X-ray Scattering . Biochemistry , 47 : 10345 – 10353 .
- Tompa , P. 2005 . The interplay between structure and function in intrinsically unstructured proteins . FEBS Lett. , 579 : 3346 – 3354 .
- Mukrasch , M.D. , Bibow , S. , Korukottu , J. , Jeganathan , S. , Biernat , J. , Griesinger , C. , Mandelkow , E. and Zweckstetter , M. 2009 . Structural Polymorphism of 441-Residue Tau at Single Residue Resolution . PLoS Biol. , 7 : 399 – 414 .
- Avila , J. , Lucas , J.J. , Pérez , M. and Hernàndez , F. 2004 . Role of Tau Protein in Both Physiological and Pathological Conditions . Physiol. Rev. 84 , : 361 – 384 .
- Singh , H. , Marla , S.S. and Agarwal , M. 2007 . Docking studies of Tau Protein . IAENG Int. J. Comput. Sci. , 33 : 36 – 42 .
- Mukrash , M.D. , Markwick , P. , Biernat , J. , von Bergen , M. , Bernadò , P. , Griesinger , C. , Mandelkow , E. , Zweckstetter , M. and Blackledge , M. 2007 . Highly Populated Turn Conformations in Natively Unfolded Tau Protein Identified from Residual Dipolar Couplings and Molecular Simulation . J. Am. Chem. Soc. 129 , : 5235 – 5243 .
- Mendieta , J. , Fuertes , M.A. , Kunjishapatham , R. , Santa-Marìa , I. , Moreno , F.J. , Alonso , C. , Gago , F. , Munoz , V. , Avila , J. and Hernàndez , F. 2005 . Phosphorylation modulates the alpha-helical structure and polymerization of a peptide from the third tau microtubule-binding repeat . Biochim. Biophys. Acta , 1721 : 16 – 26 .
- Humphrey , W. , Dalka , A. and Schulten , K. 1996 . Visual Molecular Dynamics . J. Mol. Graph , 14 : 33 – 38 .
- A. Battisti, G. Ciasca, A. Grottesi, A. Bianconi, and A. Tenenbaum work in progress
- Still , C. , Tempczyk , A. , Hawley , R.C. and Hendrickson , T. 1990 . Semianalytical Treatment of Solvation for Molecular Mechanics and Dynamics . J. Am. Chem. Soc. , 112 : 6127 – 6129 .
- Roe , D.R. , Okur , A. , Wickstrom , L. , Hornak , V. and Simmerling , C. 2007 . Secondary Structure Bias in Generalized Born Solvent Models: Comparison of Conformational Ensembles and Free Energy of Solvent Polarization from Explicit and Implicit Solvation . J. Phys. Chem. B , 111 : 1846 – 1857 .
- Tan , C. , Yang , L. and Luo , R. 2006 . How Well Does Poisson–Boltzmann Implicit Solvent Agree with Explicit Solvent? A Quantitative Analysis . J. Phys. Chem. B , 110 : 18680 – 18687 .
- Arteca , G.A. , Reimann , C.T. and Tapia , O. 2001 . Proteins in vacuo: Denaturing and folding mechanisms studied with computer-simulated molecular dynamics . Mass Spectrosc. Rev. , 20 : 402 – 422 .