A Parallel Algorithm for Nonequilibrium Molecular Dynamics Simulation of Shear Flow on Distributed Memory Machines

References

• Rapaport , D. C. 1987 . Microscale hydrodynamics: Discrete-particle simulation of evolving flow patters . Phys. Rev. A , 36 : 3288
   PubMed Web of Science ®Google Scholar
• Rapaport , D. C. 1988 . Large-scale molecular dynamics simulation using vector and parallel computers . Comput. Phys. Rep. , 9 : 1
   Web of Science ®Google Scholar
• Liem , S. Y. , Brown , D. and Clarke , J. H. R. 1991 . Molecular dynamics simulation on distributed memory machines . Compu. Phys. Comm. , 67 : 261
   Web of Science ®Google Scholar
• Liem , S. Y. , Brown , D. and Clarke , J. H. R. 1992 . Investigation of the homogeneous-shear nonequilibrium molecular dynamics method . Phys. Rev. A , 45 : 3706 – 3713 .
   PubMed Web of Science ®Google Scholar
• Smith , W. 1991 . Molecular dynamics on hypercube parallel computers . Comput. Phys. Comm. , 62 : 229
   Web of Science ®Google Scholar
• Petersen , H. G. and Perram , J. W. 1989 . Molecular dynamics on transputer arrays 1. Algorithm design, programming issues, timing experiments and scaling projections . Mol. Phys , 67 : 849
   Web of Science ®Google Scholar
• Cheynoweth , S. , Klomp , U. C. and Scales , L. E. 1991 . Simulation of organic liquids using psuedo-pairwise forces on a toriodal transputer array . Comput. Phys. Comm. , 62 : 297
   Web of Science ®Google Scholar
• Raine , A. R. C. , Fincham , D. and Smith , W. 1989 . Systolic loop methods for molecular dynamics simulation using multiple transputers . Comput. Phys. Comm. , 55 : 13
   Web of Science ®Google Scholar
• Burge , F. and Formili , S. L. 1990 . Concurrent molecular dynamics simulation of spinodal phase transition on transputer arrays . Comput. Phys. Comm. , 60 : 31
   Web of Science ®Google Scholar
• Pinches , M. R. S. and Tildesley , D. J. 1991 . Large scale molecular dynamics on parallel computers using the link-cell algorithm . Mol. Sim. , 6 : 51
   Web of Science ®Google Scholar
• Brown , D. , Clarke , J. H. R. , Okuda , M. and Yamazaki , T. 1993 . A domain decomposition parallelization strategy for molecular dynamics simulation on distributed memory machines . Comput. Phys. Comm. , 74 : 67
   Web of Science ®Google Scholar
• Esselink , K. , Smit , B. and Hilbers , P. A. J. 1990 . Efficient parallel implementation of molecular dynamics on a toroidal network. Part 1. Parallelizing strategy . J. Comp. Phys. , 106 : 101
   Google Scholar
• Lees , A. W. and Edwards , S. F. 1971 . The computer study of transport processes under extreme conditions . J. Phys. C , 5 : 1921
   Google Scholar
• Ishihata , H. , Horie , T. , Inano , I. , Shimizu , T. and Kato , S. 1990 . CAP-II Architecture , Kawasaki : First Fujitsu-ANU CAP workshop .
   Google Scholar
• Evans , D. J. , Morriss , G. P. and Hood , L. M. 1989 . On the number dependence of viscosity in three dimensional fluids . Mol. Phys. , 68 : 637
   Web of Science ®Google Scholar
• Evans , D. J. and Moriss , G. P. 1990 . Nonequilibrium statistical mechanics of liquids , Academic Press .
   Google Scholar
• Evans , D. J. 1979 . The frequency dependent shear viscosity of methane . Mol. Phys. , 37 : 1745
   Web of Science ®Google Scholar
• Hood , L. M. , Evans , D. J. and Cui , S. T. 1992 . Number dependence of viscosity in two dimensional fluids . Mol. Sim. , 9 : 307
   Web of Science ®Google Scholar