263
Views
6
CrossRef citations to date
0
Altmetric
Articles

An investigation of circadian rhythm in Escherichia coli

, , , , , , , & show all
Pages 753-762 | Received 20 Apr 2015, Accepted 09 May 2015, Published online: 19 Jun 2015

References

  • Abate G, Aseffa A, Selassie A, Goshu S, Fekade B, WoldeMeskal D, Miorner H. 2004. Direct colorimetric assay for rapid detection of rifampin-resistant Mycobacterium tuberculosis. J Clin Microbiol. 42:871–873.10.1128/JCM.42.2.871-873.2004
  • Aoki S, Kondo T, Wada H, Ishiura M. 1997. Circadian rhythm of the cyanobacterium Synechocystis sp. strain PCC 6803 in the dark. J Bacteriol. 179:5751–5755.
  • Berridge MV, Herst PM, Tan AS. 2005. Tetrazolium dyes as tools in cell biology: new insights into their cellular reduction. Biotechnol Annu Rev. 11:127–152.
  • Chen TH, Chen TL, Hung LM, Huang TC. 1991. Circadian rhythm in amino acid uptake by Synechococcus RF-1. Plant Physiol. 97:55–59.10.1104/pp.97.1.55
  • Cornélissen G, Halberg F. 2005. Chronomedicine. In: Encyclopedia of biostatistics. 2nd ed. Chichester: Wiley; p. 796–812.
  • Dvornyk V, Vinogradova O, Nevo E. 2003. Origin and evolution of circadian clock genes in prokaryotes. Proc Nat Acad Sci USA. 100:2495–2500.10.1073/pnas.0130099100
  • Edgar RS, Green EW, Zhao Y, van Ooijen G, Olmedo M, Qin X, Xu Y, Pan M, Valekunja UK, Feeney KA, et al. 2012. Peroxiredoxins are conserved markers of circadian rhythms. Nature. 485:459–464.
  • Ehret CF, Trucco E. 1967. Molecular models for the circadian clock. J Theor Biol. 15:240–262.10.1016/0022-5193(67)90206-8
  • Grobbelaar N, Huang TC, Lin HY, Chow TJ. 1986. Dinitrogen-fixing endogenous rhythm in Synechococcus RF-1. FEMS Microbiol Lett. 37:173–177.10.1111/fml.1986.37.issue-2
  • Hall A, Nelson K, Poole LB, Karplus PA. 2011. Structure-based insights into the catalytic power and conformational dexterity of peroxiredoxins. Antioxid Redox Signal. 15:795–815.10.1089/ars.2010.3624
  • Hoffmann WA, Poorter H. 2002. Avoiding bias in calculations of relative growth rate. Ann Bot. 90:37–42.10.1093/aob/mcf140
  • Huang LK, Du P, Huo CG. 2008. Inquiring into the method of counting live germ with MTT. Shi Pin Gong Ye. 3:62–64.
  • Johnson CH. 2007. Bacterial circadian programs. Cold Spring Harb Symp Quant Biol. 72:395–404.10.1101/sqb.2007.72.027
  • Kippert F. 1987. Endocytobiotic coordination, intracellular calcium signaling, and the origin of endogenous rhythms. Ann NY Acad Sci. 503:476–495.10.1111/nyas.1987.503.issue-1
  • Kondo T, Strayer CA, Kulkarni RD, Taylor W, Ishiura M, Golden SS, Johnson CH. 1993. Circadian rhythms in prokaryotes: luciferase as a reporter of circadian gene expression in cyanobacteria. Proc Natl Acad Sci USA. 90:5672–5676.10.1073/pnas.90.12.5672
  • Kwiatkowski D, Greenwood BM. 1989. Why is malaria fever periodic? A hypothesis. Parasitol Today. 5:264–266.10.1016/0169-4758(89)90261-5
  • Lowrey PL, Takahashi JS. 2004. Mammalian circadian biology: elucidating genome-wide levels of temporal organization. Annu Rev Genomics Hum Genet. 5:407–441.10.1146/annurev.genom.5.061903.175925
  • Loza-Correa M, Gomez-Valero L, Buchrieser C. 2010. Circadian clock proteins in prokaryotes: hidden rhythms? Front Microbiol. 130:1–11.
  • Min H, Guo H, Xiong J. 2005. Rhythmic gene expression in a purple photosynthetic bacterium, Rhodobacter sphaeroides. FEBS Lett. 579:808–812.10.1016/j.febslet.2005.01.003
  • Mitsui A, Kumazawa S, Takahashi A, Ikemoto H, Cao S, Arai T. 1986. Strategy by which nitrogen-fixing unicellular cyanobacteria grow photoautotrophically. Nature. 323:720–722.10.1038/323720a0
  • Mosmann T. 1983. Rapid colorimetric assay for cellular growth and survival: application to proliferation and cytotoxicity assays. J Immunol Methods. 65:55–63.10.1016/0022-1759(83)90303-4
  • Nakajima M, Imai K, Ito H, Murayama Y, Iwasaki H, Oyama T, Oyama T, Kondo T. 2005. Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in Vitro. Science. 308:414–415.10.1126/science.1108451
  • Rogers LA, Greenbank GR. 1930. The intermittent growth of bacterial cultures. J Bacteriol. 19(3):181–190.
  • Schweiger HG, Schweiger M. 1977. Circadian rhythms in unicellular organisms: an endeavor to explain the molecular mechanism. Int Rev Cytol. 51:315–342.
  • Soriano MI, Roibás B, García AB. 2010. Evidence of circadian rhythms in non-photosynthetic bacteria? J Circadian Rhythms. 8:1–4.10.1186/1740-3391-8-8
  • Stal LJ, Krumbein WE. 1985. Nitrogenase activity in the non-heterocystous cyanobacterium Oscillatoria sp. grown under alternating light-dark cycles. Arch Microbiol. 143:67–71.10.1007/BF00414770
  • Wang H, Cheng H, Wang F, Wei D, Wang X. 2010. An improved 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) reduction assay for evaluating the viability of Escherichia coli cells. J Microbiol Methods. 82:330–333.10.1016/j.mimet.2010.06.014
  • Wang ZR, Gao Q, Ma CX. 2011. MTT assay for evaluation of the viability of Escherichia coli cells. J Environ Sci. 31:2612–2650.
  • Whitehead K, Pan M, Masumura K, Bonneau R, Baliga NS. 2009. Diurnally entrained anticipatory behavior in archaea. PLoS One. 4:e5485.10.1371/journal.pone.0005485
  • Zhang J, Liu X. 2002. Study on tetrazolium salt colorimetric assay for growth and survival of bacteria. Wei Sheng Yan Jiu. 31:361–363.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.