Information measure for analyzing specific spiking patterns and applications to LGN bursts

References

• Alitto HJ, Weyand TG, Usrey WM. Distinct properties of stimulus-evoked bursts in the lateral geniculate nucleus. The Journal of Neuroscience 2005; 25: 514–523
   PubMed Web of Science ®Google Scholar
• Averbeck BB, Crowe DA, Chafee MV, Georgopoulos AP. Neural activity in prefrontal cortex during copying geometrical shapes. II. Decoding shape segments from neural ensembles. Experimental Brain Research 2003; 150: 142–153
   PubMed Web of Science ®Google Scholar
• Averbeck BB, Lee D. Neural noise and movement-related codes in the macaque supplementary motor area. The Journal of Neuroscience 2003; 23: 7630–7641
   PubMed Web of Science ®Google Scholar
• Bevan MD, Magill PJ, Hallworth NE, Bolam JP, Wilson CJ. Regulation of the timing and pattern of action potential generation in rat subthalamic neurons in vitro by GABA-A IPSPs. Journal of Neurophysiology 2002; 87: 1348–1362
   PubMed Web of Science ®Google Scholar
• Brenner N, Strong SP, Koberle R, Bialek W, de Ruyter van Steveninck RR. Synergy in a neural code. Neural Computation 2000; 12: 1531–1552
   PubMed Web of Science ®Google Scholar
• Dan Y, Alonso JM, Usrey WM, Reid RC. Coding of visual information by precisely correlated spikes in the lateral geniculate nucleus. Nature Neuroscience 1998; 1: 501–507
   PubMed Web of Science ®Google Scholar
• deCharms RC, Merzenich MM. Primary cortical representation of sounds by the coordination of action-potential timing. Nature 1996; 381: 610–613
   PubMed Web of Science ®Google Scholar
• Denning KS, Reinagel P. Visual control of burst priming in the anesthetized lateral geniculate nucleus. The Journal of Neuroscience 2005; 25: 3531–3538
   PubMed Web of Science ®Google Scholar
• Eckhorn R, Bauer R, Jordan W, Brosch M, Kruse W, Munk M, Reitboeck HJ. Coherent oscillations: a mechanism of feature linking in the visual cortex? Multiple electrode and correlation analyses in the cat. Biological Cybernetics 1988; 60: 121–130
   PubMed Web of Science ®Google Scholar
• Fee MS, Mitra PP, Kleinfeld D. Automatic sorting of multiple unit neuronal signals in the presence of anisotropic and non-Gaussian variability. The Journal of Neuroscience Methods 1996; 69: 175–188
   PubMed Web of Science ®Google Scholar
• Fellous JM, Tiesinga PH, Thomas PJ, Sejnowski TJ. Discovering spike patterns in neuronal responses. The Journal of Neuroscience 2004; 24: 2989–3001
   PubMed Web of Science ®Google Scholar
• Golledge HD, Panzeri S, Zheng F, Pola G, Scannell JW, Giannikopoulos DV, Mason RJ, Tovee MJ, Young MP. Correlations, feature-binding and population coding in primary visual cortex. Neuroreport 2003; 14: 1045–1050
   PubMed Web of Science ®Google Scholar
• Gray CM, Konig P, Engel AK, Singer W. Oscillatory responses in cat visual cortex exhibit inter-columnar synchronization which reflects global stimulus properties. Nature 1989; 338: 334–337
   PubMed Web of Science ®Google Scholar
• Gray CM, Singer W. Stimulus-specific neuronal oscillations in orientation columns of cat visual cortex. Proceedings of the National Academy of Sciences of the United States of America 1989; 86: 1698–1702
   PubMed Web of Science ®Google Scholar
• Guido W, Lu SM. Cellular bases for the control of retinogeniculate signal transmission. International Journal of Neuroscience 1995; 80: 41–63
   PubMedGoogle Scholar
• Guido W, Weyand T. Burst responses in thalamic relay cells of the awake behaving cat. Journal of Neurophysiology 1995; 74: 1782–1786
   PubMed Web of Science ®Google Scholar
• Guido W, Lu SM, Sherman SM. Relative contributions of burst and tonic responses to the receptive field properties of lateral geniculate neurons in the cat. Journal of Neurophysiology 1992; 68: 2199–2211
   PubMed Web of Science ®Google Scholar
• Guido W, Lu SM, Vaughan JW, Godwin DW, Sherman SM. Receiver operating characteristic (ROC) analysis of neurons in the cat's lateral geniculate nucleus during tonic and burst response mode. Visual Neuroscience 1995; 12: 723–741
   PubMed Web of Science ®Google Scholar
• Hirabayashi T, Miyashita Y. Dynamically modulated spike correlation in monkey inferior temporal cortex depending on the feature configuration within a whole object. The Journal of Neuroscience 2005; 25: 10299–10307
   PubMed Web of Science ®Google Scholar
• Jahnsen H, Llinas R. Ionic basis for the electro-responsiveness and oscillatory properties of guinea-pig thalamic neurones in vitro. Journal of Physiology 1984; 349: 227–247
   PubMed Web of Science ®Google Scholar
• Kara P, Reinagel P, Reid RC. Low response variability in simultaneously recorded retinal, thalamic, and cortical neurons. Neuron 2000; 27: 635–646
   PubMed Web of Science ®Google Scholar
• Kepecs A, Lisman J. Information encoding and computation with spikes and bursts. Network 2003; 14: 103–118
   PubMed Web of Science ®Google Scholar
• Kepecs A, Wang XJ, Lisman J. Bursting neurons signal input slope. The Journal of Neuroscience 2002; 22: 9053–9062
   PubMed Web of Science ®Google Scholar
• Lesica NA, Stanley GB. Encoding of natural scene movies by tonic and burst spikes in the lateral geniculate nucleus. The Journal of Neuroscience 2004; 24: 10731–10740
   PubMed Web of Science ®Google Scholar
• Lesica NA, Weng C, Jin J, Yeh CI, Alonso JM, Stanley GB. Dyanmic encoding of natural luminance sequences by LGN bursts. PLoS Biology 2006; 4(7)e209
   PubMedGoogle Scholar
• Lestienne R, Strehler BL. Time structure and stimulus dependence of precisely replicating patterns present in monkey cortical neuronal spike trains. Brain Research 1987; 437: 214–238
   PubMed Web of Science ®Google Scholar
• Lestienne R, Tuckwell HC. The significance of precisely replicating patterns in mammalian CNS spike trains. Neuroscience 1998; 82: 315–336
   PubMed Web of Science ®Google Scholar
• Lestienne R, Tuckwell HC, Chalansonnet M, Chaput M. Repeating triplets of spikes and oscillations in the mitral cell discharges of freely breathing rats. European Journal of Neuroscience 1999; 11: 3185–3193
   PubMed Web of Science ®Google Scholar
• Levine MW, Castaldo K, Kasapoglu MB. Firing coincidences between neighboring retinal ganglion cells: inside information or epiphenomenon?. Biosystems 2002; 67: 139–146
   PubMed Web of Science ®Google Scholar
• Li J, Bickford ME, Guido W. Distinct firing properties of higher order thalamic relay neurons. Journal of Neurophysiology 2003; 90: 291–299
   PubMed Web of Science ®Google Scholar
• Liu RC, Tzonev S, Rebrik S, Miller KD. Variability and information in a neural code of the cat lateral geniculate nucleus. Journal of Neurophysiology 2001; 86: 2789–2806
   PubMed Web of Science ®Google Scholar
• Lu SM, Guido W, Sherman SM. Effects of membrane voltage on receptive field properties of lateral geniculate neurons in the cat: contributions of the low-threshold Ca2+ conductance. Journal of Neurophysiology 1992; 68: 2185–2198
   PubMed Web of Science ®Google Scholar
• Lu SM, Guido W, Sherman SM. The brain-stem parabrachial region controls mode of response to visual stimulation of neurons in the cat's lateral geniculate nucleus. Visual Neuroscience 1993; 10: 631–642
   PubMed Web of Science ®Google Scholar
• Mandl G. Coding for stimulus velocity by temporal patterning of spike discharges in visual cells of cat superior colliculus. Vision Research 1993; 33: 1451–1475
   PubMed Web of Science ®Google Scholar
• Martinez-Conde S, Macknik SL, Hubel DH. The function of bursts of spikes during visual fixation in the awake primate lateral geniculate nucleus and primary visual cortex. Proceedings of the National Academy of Sciences of the United States of America 2002; 99: 13920–13925
   PubMed Web of Science ®Google Scholar
• Meister M, Lagnado L, Baylor DA. Concerted signaling by retinal ganglion cells. Science 1995; 270: 1207–1210
   PubMed Web of Science ®Google Scholar
• Mukherjee P, Kaplan E. Dynamics of neurons in the cat lateral geniculate nucleus: In vivo electrophysiology and computational modeling. Journal of Neurophysiology 1995; 74: 1222–1243
   PubMed Web of Science ®Google Scholar
• Nirenberg S, Carcieri SM, Jacobs AL, Latham PE. Retinal ganglion cells act largely as independent encoders. Nature 2001; 411: 698–701
   PubMed Web of Science ®Google Scholar
• Oram MW, Hatsopoulos NG, Richmond BJ, Donoghue JP. Excess synchrony in motor cortical neurons provides redundant direction information with that from coarse temporal measures. Journal of Neurophysiology 2001; 86: 1700–1716
   PubMed Web of Science ®Google Scholar
• Panzeri S, Golledge H, Zheng F, Pola G, Blanche T, Tovée M, Young M. The role of correlated firing and synchrony in coding information about single and separate objects in cat V1. Neurocomputing 2002a; 44–46: 579–584
   Web of Science ®Google Scholar
• Panzeri S, Golledge H, Zheng F, Tovée M, Young M. Objective assessment of the functional role of spike train correlations using information measures. Visual Cognition 2001; 8: 531–547
   Web of Science ®Google Scholar
• Panzeri S, Pola G, Petroni F, Young M, Petersen R. A critical assessment of different measures of the information carried by correlated neuronal firing. Biosystems 2002b; 67: 177–185
   PubMed Web of Science ®Google Scholar
• Petersen RS, Panzeri S, Diamond ME. Population coding of stimulus location in rat somatosensory cortex. Neuron 2001; 32: 503–514
   PubMed Web of Science ®Google Scholar
• Ramcharan EJ, Gnadt JW, Sherman SM. Burst and tonic firing in thalamic cells of unanesthetized, behaving monkeys. Visual Neuroscience 2000; 17: 55–62
   PubMed Web of Science ®Google Scholar
• Ramcharan EJ, Gnadt JW, Sherman SM. The effects of saccadic eye movements on the activity of geniculate relay neurons in the monkey. Visual Neuroscience 2001; 18: 253–258
   PubMed Web of Science ®Google Scholar
• Rieke F, Bodnar DA, Bialek W. Naturalistic stimuli increase the rate and efficiency of information transmission by primary auditory afferents. Proceedings Biological Sciences 1995; 262: 259–265
   PubMed Web of Science ®Google Scholar
• Reinagel P, Godwin D, Sherman SM, Koch C. Encoding of visual information by LGN bursts. Journal of Neurophysiology 1999; 81: 2558–2569
   PubMed Web of Science ®Google Scholar
• Reinagel P, Reid RC. Temporal coding of visual information in the thalamus. The Journal of Neuroscience 2000; 20: 5392–5400
   PubMed Web of Science ®Google Scholar
• Ruiz O, Royal DW, Sary G, Chen X, Schall JD, Casagrande VA. Low-threshold Ca2+-associated bursts are rare events in the LGN of the awake behaving monkey. Journal of Neurophysiology 2006
   PubMed Web of Science ®Google Scholar
• Shannon C, Weaver W. The mathematical theory of communication. Univ. of Illinois Press, Urbana, IL 1963
   Google Scholar
• Sherman SM. A wake-up call from the thalamus. Nature Neuroscience 2001; 4: 344–346
   PubMed Web of Science ®Google Scholar
• Sincich LC, Adams DL, Economides JR, Horton JC. Transmission of spike trains at the retinogeniculate synapse. The Journal of Neuroscience 2007; 27: 2683–2692
   PubMed Web of Science ®Google Scholar
• Steinmetz PN, Roy A, Fitzgerald PJ, Hsiao SS, Johnson KO, Niebur E. Attention modulates synchronized neuronal firing in primate somatosensory cortex. Nature 2000; 404: 187–190
   PubMed Web of Science ®Google Scholar
• Steriade M. To burst, or rather, not to burst. Nature Neuroscience 2001; 4: 671
   PubMed Web of Science ®Google Scholar
• Strehler BL, Lestienne R. Evidence on precise time-coded symbols and memory of patterns in monkey cortical neuronal spike trains. Proceedings of National Academy of Sciences of the United States of America 1986; 83: 9812–9816
   PubMed Web of Science ®Google Scholar
• Strong SP, Koberle R, de Ruyter van Steveninck RR, Bialek W. Entropy and information in neural spike trains. Phys Rev Lett 1998; 80: 197–200
   Web of Science ®Google Scholar
• Swadlow HA, Bezdudnaya T, Gusev AG. Spike timing and synaptic dynamics at the awake thalamocortical synapse. Progress in Brain Research 2005; 149: 91–105
   PubMed Web of Science ®Google Scholar
• Vaadia E, Haalman I, Abeles M, Bergman H, Prut Y, Slovin H, Aertsen A. Dynamics of neuronal interactions in monkey cortex in relation to behavioural events. Nature 1995; 373: 515–518
   PubMed Web of Science ®Google Scholar
• van Hateren JH. Processing of natural time series of intensities by the visual system of the blowfly. Vision Research 1997; 37: 3407–3416
   PubMed Web of Science ®Google Scholar
• Usrey WM, Alonso JM, Reid RC. Synaptic interactions between thalamic inputs to simple cells in cat visual cortex. The Journal of Neuroscience. 2000; 20: 5461–5467
   PubMed Web of Science ®Google Scholar
• Victor JD, Purpura KP. Nature and precision of temporal coding in visual cortex: a metric-space analysis. Journal of Neurophysiology 1996; 76: 1310–1326
   PubMed Web of Science ®Google Scholar
• Wang X, Wei Y, Vaingankar V, Wang Q, Koepsell K, Sommer FT, Hirsch JA. Feedforward excitation and inhibition evoke dual modes of firing in the cat's visual thalamus during naturalistic viewing. Neuron 2007; 55: 465–478
   PubMed Web of Science ®Google Scholar
• Weyand TG, Boudreaux M, Guido W. Burst and tonic response modes in thalamic neurons during sleep and wakefulness. Journal of Neurophysiology 2001; 85: 1107–1118
   PubMed Web of Science ®Google Scholar