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Original Articles

Patient-specific modelling of pulmonary airflow using GPU cluster for the application in medical practice

, , , , , & show all
Pages 771-778 | Received 25 Oct 2010, Accepted 03 Feb 2011, Published online: 02 Aug 2011

References

  • Balásházy , I and Hofmann , W . 1993a . Particle deposition in airway bifurcations – I. Inspiratory flow . J Aerosol Sci , 24 ( 6 ) : 745 – 772 .
  • Balásházy , I and Hofmann , W . 1993b . Particle deposition in airway bifurcations – II. Expiratory flow . J Aerosol Sci , 24 ( 6 ) : 773 – 786 .
  • Comeford , A , Förster , C and Wall , WA . 2010 . Structured tree impedance outflow boundary conditions for 3D lung simulations . J Biomech Eng , 132 : 081002
  • Corrigan , A , Camelli , FF , Löhner , R and Wallin , J . 2010 . Running unstructured grid-based CFD solvers on modern graphics hardware . Int J Numer Meth Fluids , 66 ( 2 ) : 221 – 229 .
  • CUDA C best practices guide. [cited 2010 Sep 20]. Available from: http://developer.nvidia.com/
  • CUDA C programming guide. [cited 2010 Sep 20]. Available from: http://developer.nvidia.com/
  • De Backer , JW , Vos , WG , Devolder , A , Verhulst , SL , Germonpré , P , Wuyts , FL , Parizel , PM and De Backer , W . 2008 . Computational fluid dynamics can detect changes in airway resistance in asthmatics after acute bronchodilation . J Biomech , 41 : 106 – 113 .
  • De Backer , JW , Vos , WG , Vinchurkar , SC , Claes , R , Drollmann , A , Wulfrank , D , Parizel , PM , Germonpré , P and De Backer , W . 2010 . Validation of computational fluid dynamics in CT-based airway models with SPECT/CT . Radiology , 257 : 854 – 862 .
  • Freitas , RK and Schröder , W . 2008 . Numerical investigation of the three-dimensional flow in a human lung model . J Biomech , 41 : 2446 – 2457 .
  • Gemci , T , Ponyavin , V , Chen , Y , Chen , H and Collins , R . 2008 . Computational model of airflow in upper 17 generations of human respiratory tract . J Biomech , 41 : 2047 – 2054 .
  • Kuznik , F , Obrecht , C , Rusaouen , G and Roux , J . 2010 . LBM based flow simulation using GPU computing processor . Comput Math Appl , 59 : 2380 – 2392 .
  • Lin , CL , Tawhai , MH , McLennan , G and Hoffman , EA . 2007 . Characteristics of the turbulent laryngeal jet and its effect on airflow in the human intra-thoracic airways . Respir Physiol Neurobiol , 157 : 295 – 309 .
  • Nowak , N , Kakade , PP and Annapragada , AV . 2003 . Computational fluid dynamics simulation of airflow and aerosol deposition in human lungs . Ann Biomed Eng , 31 : 374 – 390 .
  • Palabos., [cited 2010 Sep 20]. Available from: http://www.lbmethod.org/palabos/
  • Qian , YH , D'Humières , D and Lallemand , P . 1992 . Lattice BGK models for Navier-Stokes equation . Europhys Lett , 17 ( 6 ) : 479 – 484 .
  • Riegel , E , Indinger , T and Adams , NA . 2009 . Implementation of a lattice-Boltzmann method for numerical mechanics using the nVIDIA CUDA technology . CSRD , 23 : 241 – 247 .
  • Rochefort , L , Vial , L , Fodil , R , Mâtre , X , Louis , B , Isabey , D , Caillibotte , G , Thiriet , M , Bittoun , J Durand , E . 2007 . In vitro validation of computational fluid dynamic simulation in human proximal airways with hyperpolarized 3He magnetic resonance phase-contrast velocimetry . J Appl Physiol , 102 : 2012 – 2023 .
  • Stürmer , M , Götz , J , Richter , G , Dörfler , A and Rüde , U . 2009 . Fluid flow simulation on the cell broadband engine using the lattice Boltzmann method . Comput Math Appl , 58 : 1062 – 1070 .
  • Thibault , JC and Senocak , I . 2010 . Accelerating incompressible flow computations with a Pthreads-CUDA implementation on small-footprint multi-GPU platforms . J. Supercomput , (Published online)
  • Tölke , J . 2010 . Implementation of a lattice Boltzmann kernel using the compute unified device architecture developed by nVIDIA . Comput Visual Sci , 13 : 22 – 39 .
  • van Ertbruggen , C , Hirsch , C and Paiva , M . 2005 . Anatomically based three-dimensional model of airways to simulate flow and particle transport using computational fluid dynamics . J Appl Physiol , 98 : 970 – 980 .
  • Yang , XL , Liu , Y and Luo , HY . 2006 . Respiratory flow in obstructed airways . J Biomech , 39 : 2743 – 2751 .
  • Yin , Y , Choi , J , Hoffman , EA , Tawhai , MH and Lin , CL . 2010 . Simulation of pulmonary air flow with a subject-specific boundary condition . J Biomech , 43 : 2159 – 2163 .
  • Zhang , Z , Kleinstreuer , C , Donohue , JF and Kim , CS . 2005 . Comparison of micro- and nano-size particle depositions in a human upper airway model . J Aerosol Sci , 36 : 211 – 233 .
  • Zhao , Y . 2008 . Lattice Boltzmann based PDE solver on the GPU . Visual Comput , 24 : 323 – 333 .

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