Cloning, Sequence Analysis and Expression of Gene alyVI Encoding Alginate Lyase from Marine Bacterium Vibrio sp. QY101

References

• Baron, A.J., Wong, T.Y., Hicks, S.J., Gacesa P., Willcock D. and McPherson, M.J. (1994) “Alginate lyase of Klebsiella pneumo-niae subsp. aerogenes: gene cloning, sequence analysis and high-level production in Escherichia coli”, Gene 143, 61-66.
   Google Scholar
• Boyd A. and Chakrabarty, A.M. (1994) “Role of alginate lyase in cell detachment of Pseudomonas aeruginosa”, Appl. Environ. Microbiol. 60, 2355-2359.
   Google Scholar
• Boyd A., Ghosh M., May, T.B., Shinabarger D., Keogh D. and Chakrabarty, A.M. (1993) “Sequence of the algL gene of Pseudomonas aeruginosa and purification of its alginate lyase product”, Gene 131, 1-8.
   Google Scholar
• Chavagnat F., Duez C., Guinand M., Potin P., Barbeyron T., Henrissat B., Wallach J. and Ghuysen, J.M. (1996) “Cloning, sequencing and overexpression in Escherichia coli of the alginate lyase-encoding aly gene of Pseudomonas alginovora: identification of three classes of alginate lyases”, Biochem. J. 319, 575-583.
   Google Scholar
• Ertesvag H., Erlien F., Skja?k-Bræk, G., Rehm, B.H. and Valla S. (1998) “Biochemical properties and substrate specificities of a recombinantly produced Azotobacter vinelandii alginate lyase”, J. Bacteriol. 180, 3779-3784.
   Google Scholar
• Gacesa P. (1988) “Alginates”, Carbohydr. Polym. 8, 161-182.
   Google Scholar
• Gacesa, P. (1992) “Enzymic degradation of alginates”, Int. J. Biochem. 24, 545-552.
   Google Scholar
• Hatch, R.A. and Schiller, W.L. (1998) “Alginate lyase promotes diffusion of aminoglycosides through the extracellular polysaccharide of mucoid Pseudomonas aeruginosa”, Anti-microb. Agents Chemother. 42, 974-977.
   Google Scholar
• Kraiwattanapong J., Ooi T. and Kinoshita S. (1997) “Cloning and sequence analysis of the gene (alyII) coding for an alginate lyase of Pseudomonas sp. OS-ALG-9”, Biosci. Biotechnol. Biochem. 61, 1853-1857.
   Google Scholar
• Laemmli, U.K. (1970) “Cleavage of structural proteins during the assembly of the head of bacteriophage T4”, Nature 227, 680-685.
   Google Scholar
• Lowry, O.H., Rosebrough, N.J., Farr, A.L. and Randall, R.L. (1951) “Protein measurement with the folin phenol reagent”, J. Biol.Chem. 193, 265-275.
   Google Scholar
• Malissard M., Duez C., Guinand M., Vacheron, M.J., Michel G., Marty N., Joris B., Thamm I. and Ghuysen, J.M. (1993) “Sequence of a gene encoding a (poly ManA) alginate lyase active on Pseudomonas aeruginosa alginate”, FEMS Microbiol. Lett. 110, 101-106.
   Google Scholar
• Marki H., Mori A., Fujiyama K., Kinoshita S. and Yoshida T. (1993) “Cloning, sequence analysis and expression in Escherichia coli of a gene encoding an alginate lyase from Pseudomonas sp. OS-ALG-9”, J. Gen. Microbiol. 139, 987-993.
   Google Scholar
• Matsudaira P. (1987) “Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes”, J. Biol. Chem. 262, 10035-10038.
   Google Scholar
• Nichols, W.W., Evans, M.J., Slack, M.P.E. and Walmsley, H.L. (1989) “The penetration of antibiotics into aggregates of mucoid and non-mucoid Pseudomonas aeruginosa”, J. Gen. Microbiol. 135, 1291-1303.
   Google Scholar
• Oppenhimer, C.H. and ZoBell, C.E. (1952) “The growth and viability of sixty-three species of marine bacteria as influenced by hydrostatic pressure”, J. Mar. Res. 11, 10-18.
   Google Scholar
• Pecina A., Pascual A. and Paneque A. (1999) “Cloning and expression of the algL gene, encoding the Azotobacter chroococcum alginate lyase: purification and characterization of the enzyme”, J. Bacteriol. 181, 1409-1414.
   Google Scholar
• Preston, L.A., Wong, T.Y., Bender, C.L. and Schiller, N.L. (2000) “Characterization of alginate lyase from Pseudomonas syringae pv. Syringae”, J. Bacteriol. 182, 6268-6271.
   Google Scholar
• Sambrook J. and Russell, D.W. (2001) Molecular Cloning: A Laboratory Manual, 3rd Ed. (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY).
   Google Scholar
• Sawabe T., Takahashi H., Ezura Y. and Gacesa P. (2001) “Cloning, sequence analysis and expression of Pseudoalteromonas elyakovii IAM 14594 gene (alyPEEC) encoding the extracellular alginate lyase”, Carbohydr. Res. 335, 11-21.
   Google Scholar
• Skjajik-Bræk, G., Grasdalen H. and Larsen B. (1986) “Monomer sequence and acetylation pattern in same bacterial alginates”, Carbohydr. Res. 154, 239-250.
   Google Scholar
• Song K., Yu, W.G., Han F., Han, W.J. and Li, J.B. (2003) “Purification and characterization of alginate lyase from marine bacterium Vibrio sp. QY101”, Acta Biochim. Biophys. Sin. 35, 473-477.
   Google Scholar
• Sugimura I., Sawabe T. and Ezura Y. (2000) “Cloning and sequence analysis of Vibrio halioticoli genes encoding three types of polyguluronate lyase”, Mar. Biotech-nol. 2, 65-73.
   Google Scholar
• Wong, T.Y., Preston, L.A. and Schiller, N.L. (2000) “Alginate lyase: review of major sources and enzyme characterization, structure-function analysis, biological roles, and appli-cations”, Annu. Rev. Microbiol. 54, 289-340.
   Google Scholar
• Yonemoto Y., Tanaka H., Hisano T., Sakaguchi K., Abe S., Yamashita T., Kimura A. and Murata K. (1993) “Bacterial alginate lyase gene: nucleotide sequence and molecular route for generation of alginate lyase species”, J. Ferment. Bioeng. 75, 336-342.
   Google Scholar