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Articles

De novo transcriptome sequencing and analysis of the cuttlefish (Sepiella japonica) with different embryonic developmental stages

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References

  • Lü Z, Liu W, Liu L, et al. De novo assembly and comparison of the ovarian transcriptomes of the common Chinese cuttlefish (Sepiella japonica) with different gonadal development. Genom Data. 2016;7:155–158.
  • Lp G, Tp E, Fj W, Paul DF. Cephalopod culture: physiological, behavioral and environmental requirements. Aquacult Sci. 1998;46(3):417–422.
  • Wu C, Chi C, He G, Lü Z, Xu M. Isolation via enrichment and characterization of ten polymorphic microsatellite loci in the cuttlefish, Sepiella maindroni de Rochebruns. Acta Oceanol Sin. 2010;29(6):121–124.
  • Lin HZ, Mei ZX, Dong ZP. Biological characteristics and multiplication techniques of Sepia esculenta. Chin J Ecol. 2007;26(4):601–606.
  • Bloor IS, Attrill MJ, Jackson EL. A review of the factors influencing spawning, early life stage survival and recruitment variability in the common cuttlefish (Sepia officinalis). Adv Mar Biol. 2013;65:1–65.
  • Naef A. Die Cephalopoden. Embryologie. Die Fauna Flora Golf Neapel. 1928;35(2):1–357.
  • Jiang XM, Chen-Hong GE, Tong QL, Tang SJ, Wang CL. The embryonic development of Sepiella maindroni. J Ningbo Univ. 2011;24(2):1–7.
  • Liu ZY, Su YZ, Xie YQ, Zhou RF. Preliminary observation on embryonic development of Sepiella maindroni. Prog Fishery Sci. 2009;30(5):13–19.
  • Von BS. Biology of early life stages in cephalopod molluscs. Adv Mar Biol. 2003;44:143–203.
  • Minton JW. The pattern of growth in the early lifecycle of individual Sepia pharaonis. Mar Freshwater Res. 2004;55(4):415–422.
  • Grabherr MG, Haas BJ, Yassour M, et al. Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nat Biotechnol. 2011;29(7):644–652.
  • Conesa A, Gotz S, Garcia-Gomez JM, Terol J, Talon M, Robles M. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics. 2005;21(18):3674–3676.
  • Ye J, Fang L, Zheng H, et al. WEGO: a web tool for plotting GO annotations. Nucleic Acids Res. 2006;34:W293–W297.
  • Li R, Yu C, Li Y, et al. SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics. 2009;25(15):1966–1967.
  • Planet E, Attolini CS, Reina O, Flores O, Rossell D. htSeqTools: high-throughput sequencing quality control, processing and visualization in R. Bioinformatics. 2012;28(4):589–590.
  • Love MI, Huber W, Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 2014;15(12):550.
  • Yan YJ, Wang TM, Liu W, et al. Identification and expression profile of the gonadotropin-releasing hormone receptor in common chinese cuttlefish, Sepiella japonica. J Exp Zool. 2016;325(7):453–466.
  • Lu ZM, Liu W, Liu LQ, et al. Cloning, characterization, and expression profile of estrogen receptor in common Chinese cuttlefish, Sepiella japonica. J Exp Zool. 2016;325(3):181–193.
  • Zhang X, Mao Y, Huang Z, et al. Transcriptome analysis of the Octopus vulgaris central nervous system. PLoS One. 2012;7(6):e40320.
  • Liu C, Zhao F, Yan J, Liu C, Liu S, Chen S. Transcriptome sequencing and de novo assembly of golden cuttlefish Sepia esculenta hoyle. Int J Mol Sci. 2016;17(10):1749.
  • Brown AC, Adams D, De Caestecker M, et al. FGF/EGF signaling regulates the renewal of early nephron progenitors during embryonic development. Development. 2011;138(23):5099–5112.
  • Yu Z, Tang PLF, Wang J, et al. Mutations in Hnrnpa1 cause congenital heart defects. JCI Insight. 2018;3(2):e98555.
  • Takemoto L, Boyle D. Specific glutamine and asparagine residues of gamma-S crystallin are resistant to in vivo deamidation. J Biol Chem. 2000;275(34):26109–26112.

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