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Tracing the genetic footprints: India’s role as a gateway for pig migration and domestication across continents

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References

  • Laxmivandana R, Vashi Y, Kalita D, Banik S, Sahoo NR, Naskar S. Genetic diversity in mitochondrial DNA D-loop region of indigenous pig breeds of India. J Genet. 2022;101:5.
  • Behl R, Vij PK, Niranjan SK, Behl J, Vijh RK. Indigenous pig genetic resources of India: Distribution, types and their characteristics. Indian J Anim Sci. 2020;90(2):127–133.
  • 20th Livestock Census. Directorate of Economics and Statistics; Animal Husbandry Statistics Division, Department of Animal Husbandry Dairying and Fisheries, Ministry of Agriculture. New Delhi, India: Government of India; 2019.
  • Sharma R, Ahlawat S, Sharma H, Prakash V, Khatak S, Sawal RK, Tantia MS. Identification of a new Indian camel germplasm by microsatellite markers based genetic diversity and population structure of three camel populations. Saudi J Biol Sci. 2020;27(7):1699–1709.
  • Sahoo NR, Nesa N, Naskar S, Banik S, Pankaj PK, Sahoo M. Microsatellite and mitochondrial diversity analysis of native pigs of Indo-Burma biodiversity hotspot. Anim Biotechnol. 2016;27(1):52–59.
  • Larson G, Dobney K, Albarella U, et al. Worldwide phylogeography of wild boar reveals multiple centers of pig domestication. Science. 2005;307(5715):1618–1621.
  • Luikart G, Gielly L, Excoffier L, Vigne JD, Bouvet J, Taberlet P. Multiple maternal origins and weak phylogeographic structure in domestic goats. Proc Natl Acad Sci U S A. 2001;98(10):5927–5932.
  • Singh R, Lava Kumar S, Mishra SK, et al. Mitochondrial sequence-based evolutionary analysis of riverine–swamp hybrid buffaloes of India indicates novel maternal differentiation and domestication patterns. Anim Genet. 2020;51(3):476–482.
  • Xia X, Qu K, Zhang G, et al. Comprehensive analysis of the mitochondrial DNA diversity in Chinese cattle. Anim Genet. 2019;50(1):70–73.
  • Sharma R, Ahlawat S, Sharma H, et al. Microsatellite and mitochondrial DNA analyses unveil the genetic structure of native sheep breeds from three major agroecological regions of India. Sci Rep. 2020;10(1):20422.
  • Diwedi J, Singh AW, Ahlawat S, et al. Comprehensive analysis of mitochondrial DNA based genetic diversity in Indian goats. Gene. 2020;756:144910.
  • Choi SK, Kim KS, Ranyuk M, et al. Asia wide phylogeography of wild boar (Sus scrofa) based on mitochondrial DNA and Y-chromosome: revising the migration routes of wild boar in Asia. PLOS One. 2020;15(8):e0238049.
  • Satyanarayana DS, Ahlawat S, Sharma R, et al. Mitochondrial DNA diversity divulges high levels of haplotype diversity and lack of genetic structure in the Indian camels. Gene. 2022;820:146279.
  • Srivastava GK, Rajput N, Jadav KK, Shrivastav AB, Joshi HR. Single nucleotide markers of D-loop for identification of Indian wild pig (Sus scrofa cristatus). Vet World. 2015;8(4):532–536.
  • Untergasser A, Cutcutache I, Koressaar T, et al. Primer3—new capabilities and interfaces. Nucleic Acids Res. 2012;40(15):e115.
  • Adeola AC, Oluwole OO, Oladele BM, Oladele BM, Olorungbounmi TO, et al. Analysis of the genetic variation in mitochondrial DNA, Y-chromosome sequences, and MC1R sheds light on the ancestry of Nigerian indigenous pigs. Genet Sel Evol. 2017;49:52.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. MEGA X: Molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 2018;35(6):1547–1549.
  • Rozas J, Ferrer-Mata A, Sánchez-DelBarrio JC, et al. DnaSP 6: DNA sequence polymorphism analysis of large datasets. Mol Biol Evol. 2017;34(12):3299–3302.
  • Bandelt H, Forster P, Rohl A. Median Joining networks for inferring intra specific phylogenies. Mol Biol Evol. 1999;16(1):37–48.
  • Excoffier L, Lischer HEL. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour. 2010;10(3):564–567.
  • Huo JH, Wei QP, Wan MC, et al. Population phylogenomic analysis and origin of mitochondrial DNA in Chinese domestic pig. Mitochondrial DNA A. 2016;27(2):892–895.
  • Wu GS, Yao YG, Qu KX, et al. Population phylogenomic analysis of mitochondrial DNA in wild boars and domestic pigs revealed multiple domestication events in East Asia. Genome Biol. 2007;8(11):R245.
  • Getmantseva L, Bakoev S, Bakoev N, Karpushkina T, Kostyunina O. Mitochondrial DNA diversity in large white pigs in Russia. Animals. 2020;10(8):1365.
  • Vashi Y, Naskar S, Chutia T, et al. Comparative assessment of native, crossbred and exotic pigs during different seasons (winter, spring and summer) based on rhythmic changes in the levels of serum cortisol, lactate dehydrogenase levels and PBMC HSP70 mRNA expression pattern. Biol Rhythm Res. 2018;49(5):725–734.
  • Zaman G, Chandra Shekar M, Ferdoci AM, Laskar S. Molecular characterization of Ghungroo pig. Int J Anim Biotechnol. 2013;3:1–4.
  • Ruvinsky A, Rothschild MF, Larson G, Gongora J. Systematics and evolution of the pig. In: Rothschild MF, Ruvinsky A, eds. The Genetics of the Pig. Oxforshire: CAB International; 2011:1–13.
  • Larson G, Liu R, Zhao X, Yuan J, Fuller D, et al. Patterns of East Asian pig domestication, migration, and turnover revealed by modern and ancient DNA. Proc Natl Acad Sci U S A. 2010;107(17):7686–7691.
  • Noce A, Amills M, Manunza A, et al. East African pigs have a complex Indian, Far Eastern and Western ancestory. Anim Genet. 2015;46(4):433–436.
  • Kearney M. The Indian Ocean in World History (Themes in World History). London, UK: Routledge; 2004.
  • Fuller DQ, Boivin N, Hoogervorst T, Allaby R. Allaby Ret. across the Indian Ocean: the prehistoric movement of plants and animals. Antiquity. 2011;85(328):544–558.
  • Guinote PJA. Ascensao e Declınio da Carreira da India, Vasco da Gama e India. Vol. 2. Lisboa: Fundacao Calouste Gulbenkian; 1999:7–39.