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Original Articles

Comparative X-ray Diffraction Studies and Molecular Orbital Calculations on Diazinium Dicyanomethylides

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Pages 93-102 | Published online: 23 Sep 2006

References

  • Zugravescu , I. and Petrovanu , M. 1976 . N-Ylide Chemistry , New York : McGraw Hill International .
  • Surpateanu , G. , Catteau , J. P. , Karafiloglu , P. and Lablanche , A. 1976 . Tetrahedron , 32 : 2647
  • Matsumoto , K. , Katsura , H. , Uchida , T. , Aoyama , K. and Machiguchi , T. 1966 . J. Chem. Soc., Perkin Trans. , 1 : 2599 and previous work from our laboratory.
  • Buss , C. , Desiderato , R. and Sass , R. L. 1964 . J. Am. Chem. Soc. , 86 : 3157 for other examples of X-ray analytical data of ylidic compounds, see: Bailey, N. A., Hull, S. E., Kersting, G. F. and Morrison, J. (1971). Chem. Commun. p. 1429; Toupet, L. and Delugeard, Y. (1979). Acta Crystallogr., Sect., B 35, 1935.
  • Karzazi , Y. , Surpateanu , G. , Lungu , C. N. and Vergaten , G. 1997 . J. Mol. Struc. , 406 : 45
  • Matsumoto , K. , Uchida , T. and Uno , C. 1982 . Heterocycles , 19 : 1849 Matsumoto, K., Uchida, T., Ikemi, Y., Fujita, H., Aoyama, K. and Asahi, M. (1986). Heterocycles 24, 339; Matsumoto, K., Uchida, T., Aoyama, K., Tanaka, T. and Asahi, M. (1986). Chem. Express 1, 419; 1, 423.
  • Matsumoto , K. , Katsura , H. , Uchida , T. , Aoyama , K. and Machiguchi , T. 1997 . Heterocycles , 45 : 2443
  • Matsumoto , K. , Ciobanu , M. , Aoyama , K. and Uchida , T. 1997 . Heterocyclic Communications , 3 : 499
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  • Data were collected at T = 22°C on a Rigaku AFC5S diffractometer; 1a: C7H4N4 M = 144.14, yellow prism, dimensions 0.200 × 0.480 × 1.000 mm, orthorhombic, space group = Pnma (No. 62), a = 9.069(4) Å, b = 6.411(4) Å c = 12.299(3) Å, u = 715.1(5) Å3 Z = 4, DC = 1.3339 gcm−3 F(000) = 296. Mo-Kα radiation (λ = 0.71069 Å) μ = 0.084 mm−1, ω-2Θ scan mode with ω scan width = 1.73 + 0.30 tanθ, ω scan speed 32.0 deg min−1, 989 reflections were collected in the range 37.72 < 2Θ < 39.87. The structure was solved by direct methods [17] using full-matrix least squares on F for all non-hydrogen atoms using Lorenz polarization and absorption corrections to give R = 0.052, and Rw , = 0.066 for 581 independent observed reflections with I > 2.00[sgrave](I) and 80 variables for 2θmax = 55.0°. The final difference map maximum and minimum were 0.25 and -0.21 Å−3, respectively. 1b: C7H4N4 M = 144.14, yellow plate, dimensions 0.060 × 0.320 × 880mm, monoclinic, space group = P21/m (No. 11), a = 3.824(5) Å, b = 12.593(3) Å, c = 6.685(3) Å, β = 91.80(6)°, u = 321.8(4)Å3 Z = 2, Dc = 1.487 gcm−3 F(000) = 148. Mo-Kα radiation (λ = 0.71069 Å) μ = 0.094 mm−1, ω-Θ scan mode with ω scan width = 1.68 + 0.3 tanθ, ω scan speed 16.0 deg min−1, 876 reflections were collected in the range 38.56 < 2θ < 39.90 and 769 unique reflections (R int = 0.011 1) were used in the refinement. The structure was solved by direct methods using full-matrix least squares on F for all non-hydrogen atoms using Lorenz polarization and absorption corrections to give R = 0.052, and Rw = 0.063 for 599 independent observed reflections with I > 2.00[sgrave](I) and 56 variables for 2θmax = 55.0°. The final difference map maximum and minimum were 0.28 and -0.26eÅ−3, respectively. The atomic scattering factors for all atoms and the anomalous dispersion correction factors for atoms other than hydrogen were taken from the literature [18–20]. All calculations were performed using the TEXAN [21] crystallographic software package from Molecular Structure Corporation.
  • Semi-empirical calculations were performed using CAChe systems (Version 3.7 , CAChe Scientific, Oxford Molecular Group . MINDO/3: Bingham, R. C., Dewar, M. J. S. and Lo, D. H. (1975). J. Am. Chem. Soc. 97, 1294; MNDO: Dewar, M. J. S. and Thiel, W. J. (1977). J. Am. Chem. Soc. 99, 4899; AM1: Dewar, M. J. S., Zoebisch, E. G., Hearly, E. F. and Stewart, J. J. P. (1985). J. Am. Chem. Soc. 107, 3902; PM3: Stewart, J. J. P. (1989). J. Comp. Chem. 10, 209 and references cited.
  • Hehre , W. J. , Stewart , R. F. and Pople , J. A. 1969 . J. Chem. Phys. , 51 : 2657 Ab initio calculations were performed by IBM R6000 computer using the Mulliken 2.0 package (Version 2.0, IBM Corporation). STO-3G: .;Hehre, W. J., Ditchfield, R., Stewart, R. F. and Pople, J. A. (1970). J. Chem. Phys. 52, 2769; Piero, W. J., Levi, B. A., Hehre, W. J. and Stewart, R. F. (1980). Inorg. Chem. 19, 2225; Pietro, W. J. and Hehre, W. J. (1983). J. Comput. Chem. 4, 241; STO-3G*: Collins, J. B., Schleyer, P. v. R., Binkley, J. S. and Pople, J. A. (1976). J. Chem. Phys. 64, 5142; 3-21G: Pietro, W. J., Francl, M. M., Hehre, W. J., DeFrees, D. J., Pople, J. A. and Binkley, J. S. (1982). J. Am. Chem. Soc. 104, 5039; 3–21G*: Pietro, W. J., Francl, M. M., Hehre, W. J., DeFrees, D. J., Pople, J. A. and Binkley, J. S. (1982). J. Am. Chem. Soc. 104, 5039; 4–31G: Ditchfield, R., Hehre, W. J. and Pople, J. A., (1971). J. Chem. Phys. 54, 724; Hehre, W. J. and Pople, J. A. (1972). J. Chem. Phys. 56, 4233; Kill, J. D. and Pople, J. A. (1975). J. Chem. Phys. 62, 2921; Hehre, W. J. and Lathan, W. A. (1972). J. Chem. Phys. 56, 5255; 6–31G: Hehre, W. J., Ditchfleld, R. and Pople, J. A. (1972). J. Chem. Phys. 56, 2257; Binkley, J. S., Pople, J. A. and Hehre, W. J. (1977). J. Chem. Phys. 66, 879; Francl, M. M., Pietro, W. J., Hehre, W. J., Binkley, J. S., DeFrees, D. J. and Pople, J. A. (1982). J. Chem. Phys. 77, 3654. 6–31G*: Hariharan, P. C. and Pople, J. A. (1972). Chem. Phys. Lett. 66, 217; Francl, M. M., Pietro, W. J., Hehre, W. J., Binkley, J. S., DeFrees, D. J. and Pople, J. A. (1982). J. Chem. Phys. 77, 3654; 6–31G**: Hehre, W. J., Radom, L., Schleyer, P. v. R. and Pople, J. A. (1986). Ab initio Molecular Orbital Theory, John Wiley & Sons, New York, p. 82; 6–311G: Krishnan, R., Frisch, M. J. and Pople, J. A. (1980). J. Chem. Phys. 72, 4244; 6–311G*: Krishnan, R., Frisch, M. J. and Pople, J. A. (1980). J. Chem. Phys. 72, 4244; 6311G**: Krishnan, R., Frisch, M. J. and Pople, J. A. (1980). J. Chem. Phys. 72, 4244; D95: Dunning, T. H. (1970). J. Chem. Phys. 55, 2823; Dunning, T. H. and Hay, P. J., Gaussian Basic Sets for Molecular Calculations in Method of Electronic Structure Theory, Schaefer III, H. F. (Ed.), Plenum Press, New York, 1977; D95*: Dunning, T. H. (1971). J. Chem. Phys. 55, 3958; Magnusson, E. and Schaefer III, H. F. (1985). J. Chem. Phys. 83, 5721.
  • Delley , B. 1990 . J. Chem. Phys. , 92 : 508
  • Unpublished results from our laboratory.
  • Matsumoto , K. , Ohta , R. , Uchida , T. , Nishioka , H. and Yoshida , M. 1997 . J. Heterocyclic Chem. , 34 : 203
  • Gilmore , C. J. 1984 . J. Appl. Cryst. , 17 : 42 MITHRIL: .;DIFDIR: Beurskens, P. T., Technical Report 1984/1, Crystallography Laboratory, Toernooiveld, 6525 Ed Nijmegen, Netherlands.
  • Cromer , D. T. and Weber , J. T. 1974 . International Tables for X-ray Crystallography , Vol. IV , Birmingham, , UK : The Kynoch Press . Table 2.2A.
  • Ibers , J. A. and Hamilton , W. C. 1964 . Acta Crystallogr. , 17 : 781
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