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Research Article

Protein-macrocycle framework engineering: supramolecular copolymerisation with two disparate calixarenes

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Pages 122-128 | Received 26 Apr 2021, Accepted 23 May 2021, Published online: 06 Jun 2021

References

  • Abascal NC, Regan L. The past, present and future of protein-based materials. Open Biol. 2018;8(10):180113.
  • Yeates TO, Liu Y, Laniado J. The design of symmetric protein nanomaterials comes of age in theory and practice. Curr Opin Struct Biol. 2016;39:134–143.
  • Kuan SL, Bergamini FRG, Weil T. Functional protein nanostructures: a chemical toolbox. Chem. Soc. Rev. 2018;47(24):9069–9105.
  • Luo Q, Hou C, Bai Y, et al. Protein assembly: versatile approaches to construct highly ordered nanostructures. Chem. Rev. 2016;116(22):13571–13632.
  • Van Dun S, Ottmann C, Milroy L-G, et al. Supramolecular chemistry targeting proteins. J. Am. Chem. Soc. 2017;139(40):13960–13968.
  • Supramolecular Protein Chemistry: Assembly, Architecture and Application; Crowley PB. Eds.; Royal Society of Chemistry: Cambridge, 2020; pp 1–312.
  • McGovern RE, Fernandes H, Khan AR, et al. Protein camouflage in c ytochrome c–calixarene complexes. Nat. Chem. 2012;4(7):527–533.
  • Rennie ML, Doolan AM, Raston CL, et al. Protein dimerization on a phosphonated calix[6]arene disc. Angew. Chem. Int. Ed. 2017;56(20):5517–5521.
  • Alex JM, Rennie ML, Volpi S, et al. Phosphonated calixarene as a “molecular glue” for protein crystallization. Cryst. Growth Des. 2018;18(4):2467–2473.
  • Rennie ML, Fox GC, Pérez J, et al. Auto-regulated protein assembly on a supramolecular scaffold. Angew. Chem. Int. Ed. 2018;57(42):13764–13769.
  • Alex JM, Rennie ML, Engilberge S, et al. Calixarene-mediated assembly of a small antifungal protein. IUCrJ. 2019;6(2):238–247.
  • Engilberge S, Rennie ML, Crowley PB. c.lixarene c.pture of partially unfolded c.toc.rome c. FEBS Lett. 2019;593(16):2112–2117.
  • Engilberge S, Rennie ML, Dumont E, et al. Tuning protein frameworks via auxiliary supramolecular interactions. ACS Nano. 2019;13(9):10343–10350.
  • Alex JM, Brancatelli G, Volpi S, et al. Probing the determinants of porosity in protein frameworks: co-crystals of cytochrome c and an octa-anionic calix[4]arene. Org Biomol Chem. 2020;18(2):211–214.
  • Ramberg KO, Engilberge S, Skorek T, et al. Facile fabrication of protein-macrocycle frameworks. J. Am. Chem. Soc. 2021;143(4):1896–1907.
  • Gutsche CD, Dhawan B, No KH, et al. Calixarenes. 4. The synthesis, characterization, and properties of the calixarenes from p-tert-butylphenol. J Am Chem Soc. 1981;103(13):3782–3792.
  • Andreetti GD, Ungaro R, Pochini A. Crystal and molecular structure of cyclo{quater[(5-t-butyl-2-hydroxy-1,3-phenylene)methylene]} toluene (1:1) clathrate. J. Chem. Soc. Chem. Commun. 1979;22(22):1005–1007.
  • Gutsche CD, Bauer LJ. Calixarenes. 13. The conformational properties of calix[4]arenes, calix[6]arenes, calix[8]arenes, and oxacalixarenes. J Am Chem Soc. 1985;107(21):6052–6059.
  • Shinkai S, Mori S, Koreishi H, et al. Hexasulfonated calix[6]arene derivatives: a new class of catalysts, surfactants, and host molecules. J. Am. Chem. Soc. 1986;108(9):2409–2416.
  • Clark TE, Makha M, Sobolev AN, et al. Self-organised nano-arrays of p-phosphonic acid functionalised higher order calixarenes. New J Chem. 2008;32(9):1478–1483.
  • Martin AD, Raston CL. Multifunctional p-phosphonated calixarenes. Chem Commun. 2011;47(35):9764–9772.
  • Hamuro Y, Calama MC, Park HS, et al. A calixarene with four peptide loops: an antibody mimic for recognition of protein surfaces. Angew Chem Int Ed. 1997;36(23):2680–2683.
  • Gordo S, Martos V, Santos E, et al. Stability and structural recovery of the tetramerization domain of p53-R337H mutant induced by a designed templating ligand. Proc Natl Acad Sci. 2008;105(43):16426–16431. USA. .
  • Perret F, Coleman AW. Biochemistry of anionic calix[n]arenes. Chem. Commun. 2011;47(26):7303–7319.
  • Vonrhein C, Flensburg C, Keller P, et al. Data processing and analysis with the autoPROC toolbox. Acta Crystallogr. Sect. D: Biol. Crystallogr. 2011;67(4):293–302.
  • Kabsch W. XDS. Acta Crystallogr. Sect. D: Biol. Crystallogr. 2010;66(2): 125–132.
  • Evans PR. An Introduction to data reduction: space-group determination, scaling and intensity statistics. Acta Crystallogr. Sect. D: Biol. Crystallogr. 2011;67(4):282–292.
  • Evans PR, Murshudov GN. How good are my data and what is the resolution? Acta Crystallogr. Sect. D: Biol. Crystallogr. 2013;69(7):1204–1214.
  • Tickle IJ, Flensburg C, Keller P, et al. STARANISO. Cambridge, United Kingdom: Global Phasing Ltd; 2018.
  • McCoy AJ, Grosse-Kunstleve RW, Adams PD, et al. Phaser crystallographic software. J. Appl. Crystallogr. 2007;40(4):658–674.
  • Emsley P, Lohkamp B, Scott WG, et al. Features and development of Coot. Acta Crystallogr. Sect. D: Biol. Crystallogr. 2010;66(4):486–501.
  • Bricogne G, Blanc E, Brandl M, et al. BUSTER, Version 2.10.3. U.K.: Global Phasing, Ltd.Cambridge; 2017.
  • Williams CJ, Headd JJ, Moriarty NW, et al. MolProbity: more and better reference data for improved all-atom structure validation. Protein Sci. 2018;27(1):293–315.
  • Krissinel E, Henrick K. Inference of macromolecular assemblies from crystalline state. J. Mol. Biol. 2007;372(3):774–797.
  • Juers DH, Ruffin J. MAP_CHANNELS: a computation tool to aid in the visualization and characterization of solvent channels in macromolecular crystals. J. Appl. Crystallogr. 2014;47(6):2105–2108.
  • Abe S, Tabe H, Ijiri H, et al. Crystal engineering of self-assembled porous protein materials in living cells. ACS Nano. 2017;11(3):2410–2419.

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