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Original Articles

Autotrophic Ammonia Removal Processes: Ecology to Technology

, &
Pages 1353-1418 | Published online: 08 May 2012

REFERENCES

  • Abma , W. R. , Schultz , C. E. , Mulder , J. W. , van der Star , W. R.L. , Strous , M. , Tokutomi , T. and van Loosdrecht , M. C.M. 2007 . Full scale granular sludge Anammoxs process . Water Sci. Technol. , 55 ( 8–9 ) : 27 – 33 .
  • Ahn , Y.-H. 2006 . Sustainable nitrogen elimination biotechnologies: A review . Process Biochem. , 41 : 1709 – 1721 .
  • Ahn , Y.-H. and Choi , H.-C. 2006 . Autotrophic nitrogen removal from sludge digestor liquids in up-flow sludge bed reactor with external aeration . Process Biochem. , 41 : 1945 – 1950 .
  • Anderson , I. C. and Levine , J. S. 1986 . Relative rates of NO and N2O production by nitrifiers, denitrifiers and nitrate respirers . Appl. Environ. Microbiol. , 51 : 938 – 945 .
  • Anderson , K. K. and Hooper , A. B. 1983 . O2 and H2O are each the source in one O in NO2–produced from NH3 by Nitrosomonas; 15N NMR evidence . FEBS Lett. , 164 : 236 – 240 .
  • Anthonisen , A. C. , Loehr , R. C. , Prakasam , T. B.S. and Srinath , E. G. 1976 . Inhibition of nitrification by ammonia and nitrous acid . J. Water Pollut. Control Fed. , 48 : 835 – 852 .
  • Arp , D. J. , Chain , P. S.G. and Klotz , M. G. 2007 . The impact of genome analyses on our understanding of ammonia-oxidizing bacteria . Annu. Rev. Microbiol. , 61 : 503 – 28 .
  • Arp , D. J. , Sayavedra-Soto , L. A. and Hommes , N. G. 2002 . Molecular biology and biochemistry of ammonia oxidation by Nitrosomonas europaea . Arch. Microbiol. , 178 : 250 – 255 .
  • Arp , D. J. and Stein , L. 2003 . Metabolism of inorganic N compounds by ammonia-oxidising bacteria . Crit. Rev. Biochem. Mol. Biol. , 38 ( 6 ) : 471 – 495 .
  • Bagchi , S. , Biswas , R. and Nandy , T. 2010a . Start-up and stabilization of Anammox process from a non-acclimatized sludge in CSTR . J. Ind. Microbiol. Biotechnol. , 37 : 943 – 952 .
  • Bagchi , S. , Biswas , R. and Nandy , T. 2010b . Alkalinity and DO as controlling parameters for single-stage biological nitrogen removal (SBNR) process with partial nitritation and anammox . J. Ind. Microbiol. Biotechnol. , 37 : 871 – 876 .
  • Bagchi , S. , Biswas , R. , Roychoudhury , K. and Nandy , T. 2009 . Stable partial nitrification in an up-flow fixed bed bioreactor under oxygen limiting environment . Environ. Eng. Sci. , 26 : 1309 – 1318 .
  • Bagchi , S. , Biswas , R. , Vlaeminck , S. E. , Roychoudhury , K. and Nandy , T. 2012 . Stable performance of non-aerated two-stage partial nitritation/anammox (PANAM) with minimal process control in Microbial Biotechnology . (Available online doi:10.1111/j.1751-7915.2012.00336.x)
  • Bano , N. , Ruffin , S. , Ransom , B. and Hollibaugh , J. T. 2004 . Phylogenetic composition of Arctic Ocean archaeal assemblages and comparison with Antarctic assemblages . Appl. Environ. Microbiol. , 70 : 781 – 789 .
  • Barraclough , D. and Puri , G. 1995 . The use of 15N pool dilution and enrichment to separate the heterotrophic and autotrophic pathways of nitrification . Soil Biol. Biochem. , 27 : 17 – 22 .
  • Bateman , E. J. and Baggs , E. M. 2005 . Contributions of nitrification and denitrification to N2O emissions from soils at different water-filled pore space . Biol. Fertil. Soil , 41 : 379 – 388 .
  • Bazylinski , D. A. and Blakemore , R. P. 1983 . Denitrification and assimilatory nitrate reduction in Aquaspirillum magnetotacticum . Appl. Environ. Microbiol. , 46 : 1118 – 1124 .
  • Beaumont , H. J.E. , Hommes , N. G. , Sayavedra-Soto , L. A. , Arp , D. J. , Arciero , D. M. Hooper , A. B. 2002 . Nitrite reductase of Nitrosomonas europaea is not essential for production of gaseous nitrogen oxides and confers tolerance to nitrite . J. Bacteriol. , 184 : 2557 – 2560 .
  • Beaumont , H. J.E. , Lens , S. I. , Reijnders , W. N.M. , Westerhoff , H. V. and van Spanning , R. J.M. 2004a . Expression of nitrite reductase in Nitrosomonas europaea involves NsrR, a novel nitrite-sensitive transcription activator . Mol. Microbiol. , 54 : 148 – 158 .
  • Beaumont , H. J.E. , van Schooten , B. , Lens , S. I. , Westerhoff , H. V. and van Spanning , R. J.M. 2004b . Nitrosomonas europaea expresses a nitric oxide reductase during nitrification . J. Bacteriol. , 186 : 4417 – 4421 .
  • Biswas , R. , Bagchi , S. , Gupta , D. , Urewar , C. and Nandy , T. 2010 . Treatment of wastewater from a LTC process industry through biological and chemical oxidation processes for recycle/reuse . Water Sci. Technol. , 61 : 2563 – 2573 .
  • Biswas , R. , Bagchi , S. , Bihariya , P. , Das , A. and Nandy , T. 2011 . Stability and microbial community structure of a partial nitrifying fixed-film bioreactor in long run . Bioresource Technology , 102 : 2487 – 2494 .
  • Bock , E. 1965 . Comparative study of the effect of visible light on Nitrosomonas europaea and Nitrobacter winogradskyi . Arch. Microbiol. , 51 : 18 – 41 .
  • Bock , E. 1995 . Nitrogen loss caused by denitrifying Nitrosomonas cells using ammonium or hydrogen as electron donors and nitrite as electron acceptor . Arch. Microbiol. , 163 : 16 – 20 .
  • Bock , E. , Koops , H. P. and Harms , H. 1986 . “ Cell biology of nitrifying bacteria ” . In Nitrification , Edited by: Prosser , J. I. 17 – 38 . Oxford , , England : IRL .
  • Bock , E. and Wagner , M. 2006 . “ Oxidation of inorganic nitrogen compounds as an energy source ” . In The prokaryotes: A handbook on the biology of bacteria – ecophysiology and biochemistry , 3rd ed. , Edited by: Dworkin , M. , Falkow , S. , Rosenberg , E. , Schleifer , K.-H. and Stackebrandt , E. Vol. 2 , 457 – 495 . Singapore : Springer .
  • Bodenstein , M. 1918 . Die Geschwindigkeit der Reaktion zwischen Stickoxid und Sauerstoff . Z. Elektroch. , 24 : 183 – 201 .
  • Bothe , H. , Jost , G. , Schloter , M. , Ward , B. B. and Witzel , K.-P. 2000 . Molecular analysis of ammonia oxidation and denitrification in natural environments . FEMS Microbiol. Rev. , 24 : 673 – 690 .
  • Bremner , J. M. and Blackmer , A. M. 1978 . Nitrous oxide: emission from soils during nitrification of fertilizer nitrogen . Science , 199 : 295 – 296 .
  • Broda , E. 1977 . Two kinds of lithotrophs missing in nature . Z. allg. Mikrobiol. , 17 : 491 – 493 .
  • Cantera , J. J.L. and Stein , L. Y. 2007 . Molecular diversity of nitrite reductase genes (nirK) in nitrifying bacteria . Environ. Microbiol. , 9 : 765 – 776 .
  • Carrio , L. , Sexton , J. , Lopez , A. , Gopalakrishnam , K. and Sapienza , V. 2003 . Ammonia-nitrogen removal from centrate, 10 years of testing and operating experience in New York City , Paper presented at WEFTEC 2003, Session 42: Municipal Wastewater Treatment Processes, Water Environment Federation .
  • Castignetti , D. and Gunner , H. B. 1980 . Sequential nitrification by Alcaligens sp and Nitrobacter agilis . Can. J. Microbiol. , 26 : 1114 – 1119 .
  • Castignetti , D. and Gunner , H. B. 1982 . Differential tolerance of hydroxylamine by an Alcaligenes sp., a heterotrophic nitrifier, and by Nitrobacter agilis . Can. J. Microbiol. , 28 : 148 – 150 .
  • Castignetti , D. and Hollocher , T. C. 1984 . Heterotrophic nitrification among denitrifiers . Appl. Environ. Microbiol. , 47 : 620 – 623 .
  • Cema , G. , Szatkowska , B. , Plaza , E. , Trela , J. and Surmacz-Gorska , J. 2006 . Nitrogen removal rates at a technical scale pilot plant with one stage partial nitritation/ANAMMOX process . Water Sci. Technol. , 54 : 209 – 217 .
  • Chamchoi , N. , Nitisoravut , S. and Schmidt , J. E. 2008 . Inactivation of ANAMMOX communities under concurrent operation of anaerobic ammonium oxidation (ANAMMOX) and denitrification . Bioresour. Technol. , 99 : 3331 – 3336 .
  • Chen , H. H. , Liu , S. T. , Yang , F. L. , Yuan , X. and Wang , T. 2009 . The development of simultaneous partial nitrification, ANAMMOX and denitrification (SNAD) process in a single reactor for nitrogen removal . Bioresour. Technol. , 100 : 1548 – 1554 .
  • Chopra , I. , Storey , C. , Falla , T. J. and Pearce , J. H. 1998 . Antibiotics, peptidoglycan synthesis and genomics: the chlamydial anomaly revisited . Microbiol. , 144 : 2673 – 2678 .
  • Clement , J.-C. , Shrestha , J. , Ehrenfeld , J. G. and Jaffe , P. R. 2005 . Ammonium oxidation coupled to dissimilatory reduction of iron under anaerobic conditions in wetland soils . Soil Biol. Biochem. , 37 : 2323 – 2328 .
  • Coolen , M. J.L. , Abbas , B. , van Bleijswijk , J. , Hopmans , E. C. , Kuypers , M. M.M. , Wakeham , S. G. and Sinninghe Damsté , S. J. 2007 . Putative ammonia-oxidizing Crenarchaeota in suboxic waters of the Black Sea: A basin-wide ecological study using 16S ribosomal and functional genes and membrane lipids . Environ. Microbiol. , 9 : 1001 – 1016 .
  • Cornelius , A. and Rosenwinkel , K.-H. 2002 . Aerob/anoxische Deammonifikation stickstoffhaltiger Abwässer im KALDNES®-Biofilmverfahren, KA-Wasserwirtschaft, Abwasser, Abfall . 49 : 1398 – 1403 . (in German)
  • Dalsgaard , T. , Canfield , D. E. , Petersen , J. , Thamdrup , B. and Acuna-Gonzalez , J. 2003 . N2 production by the anammox reaction in the anoxic water column of Golfo Dulce, Costa Rica . Nature , 422 : 606 – 608 .
  • Dalsgaard , T. and Thamdrup , B. 2002 . Factors controlling anaerobic ammonium oxidation with nitrite in marine sediments . Appl. Environ. Microbiol. , 68 : 3802 – 3808 .
  • Dalsgaard , T. , Thamdrup , B. and Canfield , D. E. 2005 . Mini-review: Anaerobic ammonium oxidation (anammox) in the marine environment . Res. Microbiol. , 56 : 457 – 464 .
  • Dapena-Mora , A. , Arrojo , B. , Campos , J. L. , Mosquera-Corral , A. and Mendez , R. 2004a . Improvement of the settling properties of ANAMMOX sludge in an SBR . J. Chem. Technol. Biotechnol. , 79 : 1417 – 1420 .
  • Dapena-Mora , A. , Campos , J. L. , Mosquera-Corral , A. , Jetten , M. S.M. and Mendez , R. 2004b . Stability of the ANAMMOX process in a gas-lift reactor and a SBR . J. Biotechnol. , 110 ( 2 ) : 159 – 170 .
  • Dapena-Mora , A. , Fernandez , I. , Campos , J. L. , Mosquera-Corral , A. , Mendez , R. and Jetten , M. S.M. 2007 . Evaluation of activity and inhibition effects on Annamox process by batch tests based on the nitrogen gas production . Enzyme Microb. Technol. , 40 : 859 – 865 .
  • Dosta , J. , Fernández , I. , Vázquez-Padín , J. R. , Mosquera-Corral , A. , Campos , J. L. , Mata-Álvarez , J. and Méndez , R. 2008 . Short- and long-term effects of temperature on the Anammox process . J. Hazard. Mater. , 154 : 688 – 693 .
  • Egli , K. , Fanger , U. , Alvarezz , P. J.J. , Siegrist , H. , van der Meer , J. R. and Zehnder , A. J.B. 2001 . Enrichment and characterization of an ANAMMOX bacterium from a rotating biological contactor treating ammonium rich leachate . Arch. Microbiol. , 175 : 198 – 207 .
  • Fiencke , C. , Spieck , S. , Bock , E. and Newton , W.E . 2005 . “ Nitrifying bacteria. In Werner, D ” . In Nitrogen fixation: Origins, applications, and research progress , Vol. 4 , 255 – 276 . Amsterdam , , the Netherlands : Springer .
  • Francis , C. A. , Beman , J. M. and Kuypers , M. M.M. 2007 . New processes and players in the nitrogen cycle: the microbial ecology of anaerobic and archaeal ammonia oxidation . ISME J. , 1 : 19 – 27 .
  • Francis , C. A. , Roberts , K. J. , Beman , J. M. , Santoro , A. E. and Oakley , B. B. 2005 . Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean . Proc. Nat. Acad. Sci. USA , 102 : 14683 – 14688 .
  • Fuerst , J. A. 2005 . Intracellular compartmentation in planctomycetes . Annu. Rev. Microbiol. , 59 : 299 – 328 .
  • Fux , C. 2003 . Biological nitrogen elimination of ammonium-rich sludge digester liquids , Switzerland : Doctoral dissertation, ETH-Zürich .
  • Fux , C. , Böhler , M. , Huber , P. , Bruner , I. and Siegrist , H. 2002 . Biological treatment of ammonium-rich wastewater by partial nitritation and subsequent anaerobic ammonium oxidation (ANAMMOX) in a pilot plant . J. Biotechnol. , 99 : 295 – 306 .
  • Fux , C. , Marchesi , V. , Brunner , I. and Siegrist , H. 2004 . Anaerobic ammonium oxidation of ammonium-rich waste streams in fixed-bed reactors . Water Sci. Technol. , 49 ( 11–12 ) : 77 – 82 .
  • Fux , C. and Siegrist , H. 2004 . Nitrogen removal from sludge digester liquids by nitrification/denitrification or partial nitritation/ANAMMOX: Environmental and economical considerations . Water Sci. Technol. , 50 ( 10 ) : 19 – 26 .
  • Gong , Z. , Yang , F. , Liu , S. , Bao , H. , Hu , S. and Furukawa , K. 2007 . Feasibility of a membrane-aerated biofilm reactor to achieve single-stage autotrophic nitrogen removal based on ANAMMOX . Chemosphere , 69 : 776 – 784 .
  • Grunditz , C. and Dalhammar , G. 2001 . Development of nitrification inhibition assays using pure cultures of Nitrosomonas and Nitrobacter . Water Res. , 35 : 433 – 440 .
  • Guerrero , M. A. and Jones , R. D. 1996 . Photoinhibition of marine nitrifying bacteria. 1. Wavelength-dependent response . Mar. Ecol-Prog. Ser. , 141 ( 1–3 ) : 183 – 192 .
  • Gupta , A. B. 1997 . Thiosphaera pantotropha: A sulphur bacterium capable of simultaneous heterotrophic nitrification and aerobic denitrification . Enzyme Microb. Technol. , 21 : 589 – 595 .
  • Gupta , A. B. and Gupta , S. K. 2001 . Simultaneous carbon and nitrogen removal from high strength domestic wastewater in an aerobic RBC biofilm . Water Res. , 35 : 1714 – 1722 .
  • Gut , L. , Płaza , E. , Trela , J. , Hultman , B. and Bosander , J. 2006 . Combined partial nitritation/anammox system for treatment of digester supernatant . Water Sci. Technol. , 53 : 149 – 159 .
  • Guven , D. , Dapena-Mora , A. , Kartal , B. , Schmid , M. C. , Maas , B. , van de Pas-Schoonen , K. T. , Sozen , S. , Mendez , R. , Op den Camp , H. J.M. , Jetten , M. S.M. , Strous , M. and Schmidt , I. 2005 . Propionate oxidation and methanol inhibition of the anaerobic ammonium oxidizing bacteria . Appl. Environ. Microbiol. , 71 : 1066 – 1071 .
  • Guven , D. , van de Pas-Schoonen , K. , Schmid , M. C. , Strous , M. , Jetten , M. S.M. , Sozen , S. , Orhon , D. and Schmidt , I. 2004 . Implementation of the ANAMMOX process for improved nitrogen removal . J. Environ. Sci. Health Part A Tox. Haz. Subst. Environ. Eng. , 39 : 1729 – 1738 .
  • Hallam , S. J. , Mincer , T. J. , Schleper , C. , Preston , C. M. , Roberts , K. Richardson , P. M. 2006 . Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine crenarchaeota . PLoS Biol. , 4 : e95
  • Hao , X. , Heijnen , J. J. and van Loosdrecht , M. C.M. 2001 . Sensitivity analysis of a biofilm model describing a one-stage completely autotrophic nitrogen removal (CANON) process . Biotechnol. Bioeng. , 77 : 266 – 277 .
  • Hayatsu , M. , Tago , K. and Saito , M. 2008 . Various players in the nitrogen cycle: Diversity and functions of the microorganisms involved in nitrification and denitrification . Soil Sci. Plant Nutr. , 54 : 33 – 45 .
  • Hellinga , C. , Schellen , A. A.J.C. , Mulder , J. W. , van Loosdrecht , M. C.M. and Heijnen , J. J. 1998 . The SHARON process: An innovative method for nitrogen removal from ammonium rich wastewater . Water Sci. Technol. , 37 : 135 – 142 .
  • Hellinga , C. , van Loosdrecht , M. C.M. and Heijnen , J. J. 1997 . The Sharon process for nitrogen removal in ammonium rich waste water . Mededelingen Faculteit Landbouwwetenschappen, Universiteit Gent , 62 ( 4b ) : 1743 – 1750 .
  • Hellinga , C. , van Loosdrecht , M. C.M. and Heijnen , J. J. 1999 . Model based design of a novel process for nitrogen removal from concentrated flows . Math. Comput. Modell. Dyn. Syst. , 5 : 351 – 371 .
  • Henze , M. , Gujer , W. , Matsuo , T. and van Loosdrecht , M. C.M. 2000 . Activated sludge models ASM1, ASM2, ASM2d and ASM3. Scientific and Technical Reports , London , , England : IWA .
  • Herndl , G. J. , Reinthaler , T. , van Teira , E. A.H. , Veth , C. , Pernthaler , A. and Pernthaler , J. 2005 . Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean . Appl. Environ. Microbiol. , 71 : 2303 – 2309 .
  • Hershberger , K. L. , Barns , S. M. , Reysenbach , A.-L. , Dawson , S. C. and Pace , N. R. 1996 . Wide diversity of Crenarchaeota . Nature , 384 : 420 – 420 .
  • Hidaka , T. , Yamada , H. , Kawamura , M. and Tsuno , H. 2002 . Effect of dissolved oxygen conditions on nitrogen removal in continuously fed intermittent-aeration process with two tanks . Water Sci. Technol. , 45 : 181 – 188 .
  • Hippen , A. , Helmer , C. , Kunst , S. , Rosenwinkel , K.-H. and Seyfried , C. F. 2001 . Six years’ practical experience with aerobic/anoxic deammonification in biofilm systems . Water Sci. Technol. , 44 : 39 – 48 .
  • Hippen , A. , Rosenwinkel , K.-H. , Baumgarten , G. and Seyfried , C. F. 1997 . Aerobic deammonification: A new experience in the treatment of wastewaters . Water Sci. Technol. , 35 : 111 – 120 .
  • Hommes , N. G. , S-Soto , L. A. and Arp , D. J. 2003 . Chemolithoorganotrophic growth of Nitrosomonas europaea on fructose . J. Bacteriol. , 185 : 6809 – 6814 .
  • Hooper , A. B. , di Spirito , A. A. , Olson , T. C. , Anderson , K. A. , Cunningham , W. and Taaffe , L. R. 1984 . “ Generation of the proton gradient by a periplasmic dehydrogenase ” . In Microbial growth on C1 compounds , Edited by: Crawford , R. L. and Hanson , R. S. 53 – 58 . Washington DC : American Society for Microbiology .
  • Hooper , A. and Terry , K. 1979 . Hydroxylamine oxidoreductase of Nitrosomonas: Production of nitric oxide from hydroxylamine . Biochim. Biophys. Acta , 571 : 12 – 20 .
  • Hooper , A. B. , Vannelli , T. , Bergmann , D. J. and Arciero , D. M. 1997 . Enzymology of the oxidation of ammonia to nitrite by bacteria . Antonie van Leeuwenhoek , 71 : 59 – 67 .
  • Hu , S. S. 1990 . Acute substrate-intermediate-product related inhibition of nitrifiers , Indiana , , USA : Master's thesis, School of Civil Engineering, Purdue University, West Lafayette .
  • Hulth , S. , Aller , R. C. , Canfield , D. E. , Dalsgaard , T. , Engstrfm , P. , Gilbert , F. , Sundback , K. and Thamdrup , B. 2005 . Nitrogen removal in marine sediments: Recent findings and future research challenges . Mar. Chem. , 94 : 125 – 145 .
  • Hulth , S. , Aller , R. C. and Gilbert , F. 1999 . Coupled anoxic nitrification/manganese reduction in marine sediments . Geochim. Cosmochim. Acta , 63 : 49 – 66 .
  • Hunik , J. H. , Tramper , J. and Wijffels , R. H. 1994 . A strategy to scale-up nitrification processes with immobilized cells of Nitrosomonas europaea and Nitrobacter agilis . Bioprocess Eng. , 11 : 73 – 82 .
  • Hwang , I. S. , Min , K. S. , Choi , E. and Yun , Z. 2005 . Nitrogen removal from piggery waste using the combined SHARON and ANAMMOX process . Water Sci. Technol. , 52 : 487 – 494 .
  • Hyman , M. R. , Page , C. L. and Arp , D. J. 1994 . Oxidation of methyl fluoride and dimethyl ether by ammonia monooxygenase in Nitrosomonas europaea . Appl. Environ. Microbiol. , 60 : 3033 – 3035 .
  • Hyungseok , Y. , Kyu-Hong , A. , Kwang-Hwan , L. , Youn-Ung , K. and Kyung-Guen , S. 1999 . Nitrogen removal from synthetic wastewater by simultaneous nitrification and denitrification (SND) via nitrite in a intermittently-aerated reactor . Water Res. , 33 : 145 – 154 .
  • Ingalls , A. E. , Shah , S. R. , Hansman , R. L. , Aluwihare , L. I. , Santos , G. M. , Druffel , E. R.M. and Pearson , A. 2006 . Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon . Proc. Nat. Acad. Sci. USA , 103 : 4242 – 4247 .
  • Jardin , N. , Hippen , A. , Seyfried , C. F. , Rosenwinkel , K.-H. and Greulich , F. 2001 . Deammonification of sludge liquor at the wastewater treatment plant Hattingen with a moving bed system . GWF , 142 : 479 – 484 . (in German)
  • Jenkins , M. C. and Kemp , W. M. 1984 . The coupling of nitrification and denitrification in two estuarine sediments . Limnol. Oceanog. , 29 : 609 – 619 .
  • Jetten , M. S.M. , Cirpus , I. , Kartal , B. , van Niftrik , L. , van De Pas-Schoonen , K. T. , Sliekers , O. , Haaijer , S. , van der Star , W. , Schmid , M. , van de Vossenberg , J. , Schmidt , I. , Harhangi , H. , van Loosdrecht , M. , Kuenen , J. G. , den Camp , H. O. and Strous , M. 2005 . 1994–2004: 10 years of research on the anaerobic oxidation of ammonium . Biochem. Soc. Trans. , 33 : 119 – 123 .
  • Jetten , M. S.M. , Horn , S. J. and van Loosdrecht , M. C.M. 1997a . Towards a more sustainable municipal wastewater treatment system . Water Sci. Technol. , 35 : 171 – 180 .
  • Jetten , M. S.M. , Logemann , S. , Meyzer , G. , Robertson , L. A. , de Vries , S. , van Loosdrecht , M. C.M. and Kuenen , J. G. 1997b . Novel principles in the microbial conversions of nitrogen compounds . Antonie van Leeuenhoek , 71 : 75 – 93 .
  • Jetten , M. S.M. , Sliekers , A. O. , Kuypers , M. M.M. , Dalsgaard , T. , van Niftrik , L. , Cirpus , I. , van de Pas-Schoonen , K. T. , Lavik , G. , Thamdrup , B. , Le Paslier , D. , Op den Camp , H. J.M. , Hulth , S. , Nielsen , L. P. , Abma , W. , Third , K. , Engstrom , P. , Kuenen , J. G. , Jorgensen , B. B. , Canfield , D. E. , Sinninghe , D. J.S. , Revsbech , N. P. , Fuerst , J. , Weissenbach , J. , Wagner , M. , Schmidt , I. , Schmid , M. and Strous , M. 2003 . Anaerobic ammonium oxidation by marine and freshwater Planctomycete-like bacteria . Appl. Microbiol. Biotechnol. , 63 : 107 – 114 .
  • Jetten , M. S.M. , Strous , M. , van de Pas-Schoonen , K. T. , Schalk , J. , van Dongen , U. G.J.M. and van de Graaf , A. A. 1999 . The anaerobic oxidation of ammonium . FEMS Microbiol. Rev. , 22 : 421 – 437 .
  • Jetten , M. S.M. , Wagner , M. , Fuerst , J. , van Loosdrecht , M. C.M. , Kuenen , G. and Strous , M. 2001 . Microbiology and application of the anaerobic ammonium oxidation (‘ANAMMOX’) process . Curr. Opin. Biotechnol. , 12 : 283 – 288 .
  • Jordan , K. , Kondrashov , F. A. , Adzhubei , I. A. , Wolf , Y. I. , Koonin , E. V. , Kondrashov , A. S. and Sunyaev , S. A. 2005 . Universal trend of amino acid gain and loss in protein evolution . Nature , 433 : 633 – 638 .
  • Joss , A. , Salzgeber , D. , Eugster , J. , Konig , R. , Rottermann , K. , Burger , S. , Fabijan , P. , Leumann , S. , Mohn , J. and Siegrist , H. 2009 . Full-scale nitrogen removal from digester liquid with Partial Nitritation and ANAMMOX in one SBR . Environ. Sci. Technol. , 43 : 5301 – 5306 .
  • Jubany , I. , Lafuente , J. , Baeza , J. A. and Carrer , J. 2009 . Total and stable washout of nitrite oxidizing bacteria from a nitrifying continuous activated sludge system using automatic control based on oxygen uptake rate measurements . Water Res. , 43 : 2761 – 2772 .
  • Kalyuzhnyi , S. V. and Gladchenko , M. 2009 . DEAMOX: New microbiological process of nitrogen removal from strong nitrogenous wastewater . Desalination , 248 : 783 – 793 .
  • Kalyuzhnyi , S. V. , Gladchenko , M. A. , Kang , H. , Mulder , A. and Versprille , A. 2008 . Development and optimisation of VFA driven DEAMOX process for treatment of strong nitrogenous anaerobic effluents . Water Sci. Technol. , 57 : 323 – 328 .
  • Kalyuzhnyi , S. V. , Gladchenko , M. , Mulder , A. and Versprille , B. 2006 . DEAMOX—New biological nitrogen removal process based on anaerobic ammonia oxidation coupled to sulphide-driven conversion of nitrate into nitrite . Water Res. , 40 : 3637 – 3645 .
  • Kalyuzhnyi , S. V. , Gladchenko , M. , Mulder , A. and Versprille , B. 2007 . Comparison of quasisteady-state performance of the DEAMOX process under intermittent and continuous feeding and different nitrogen loading rates . Biotechnol. J. , 2 : 894 – 900 .
  • Karner , M. B. , DeLong , E. F. and Karl , D. M. 2001 . Archaeal dominance in the mesopelagic zone of the Pacific Ocean . Nature , 409 : 507 – 510 .
  • Kartal , B. , Rattray , J. , van Niftrik , L. A. , van de Vossenberg , J. , Schmid , M. C. , Webb , R. I. , Schouten , S. , Fuerst , J. A. , Damsté , J. S. , Jetten , M. S.M. and Strous , M. 2007 . Candidatus “Anammoxoglobus propionicus” a new propionate oxidizing species of anaerobic ammonium oxidizing bacteria . Syst. Appl. Microbiol. , 30 : 39 – 49 .
  • Kartal , B. , van Niftrik , L. , Sliekers , O. , Schmid , M. C. , Schmidt , I. , van de Pas-Schoonen , K. , Cirpus , I. , van der Star , W. , van Loosdrecht , M. C.M. and Abma , W. 2004 . Application, eco-physiology and biodiversity of anaerobic ammonium-oxidizing bacteria . Rev. Environ. Sci. Biol./Technol. , 3 : 255 – 264 .
  • Kester , R. A. , de Boer , W. and Laanbroek , H. J. 1997 . Production of NO and N2O by pure cultures of nitrifying and denitrifying bacteria during changes in aeration . Appl. Environ. Microbiol. , 63 : 3872 – 3877 .
  • Khin , T. and Annachhatre , A. P. 2004 . Novel microbial nitrogen removal processes . Biotechnol. Adv. , 22 : 519 – 532 .
  • Killham , K. 1986 . “ Heterotrophic nitrification ” . In Nitrification , Edited by: Prosser , J. I. 117 – 126 . Oxford , , England : IRL Press .
  • Klotz , M. G. and Stein , L. Y. 2008 . Nitrifier genomics and evolution of the nitrogen cycle . FEMS Microbiol. Lett. , 278 : 146 – 156 .
  • Konneke , M. , Bernhard , A. E. , de la Torre , J. R. , Walker , C. B. , Waterbury , J. B. and Stahl , D. A. 2005 . Isolation of an autotrophic ammonia-oxidizing marine archaeon . Nature , 437 : 543 – 546 .
  • Kuai , L. P. and Verstraete , W. 1998 . Ammonium removal by the oxygenlimited autotrophic nitrification–denitrification system . Appl. Environ. Microbiol. , 64 : 4500 – 4506 .
  • Kuenen , J. G. 2008 . ANAMMOX bacteria: From discovery to application . Nat. Rev. Microbiol. , 6 : 320 – 326 .
  • Kuenen , J. G. and Roberston , L. A. 1994 . Combined nitrification-denitrification processes . FEMS Microbiol. Rev. , 15 : 109 – 117 .
  • Kumar , M. and Lin , J.-G. 2010 . Co-existence of anammox and denitrification for simultaneous nitrogen and carbon removal—strategies and issues . J. Hazard. Mater. , 178 : 1 – 9 .
  • Kuypers , M. M.M. , Sliekers , A. O. , Lavik , G. , Schmid , M. , Jorgensen , B. B. , Kuenen , J. G. , Damste , J. S.S. , Strous , M. and Jetten , M. S.M. 2003 . Anaerobic ammonium oxidation by anammox bacteria in the Black Sea . Nature , 422 : 608 – 611 .
  • Laanbroek , H. J. , Bar-Gilissen , M. J. and Hoogveld , H. L. 2002 . Nitrite as a stimulus for ammonia-starved Nitrosomonas europaea . Appl. Environ. Microbiol. , 68 : 1454 – 1457 .
  • Ladiges , G. , Thierbach , R. D. , Beier , M. and Focken . 2006 . “ Versuche zur zweistufigen Deammonifikation im Hamburger Klärwerksverbund. [Attempts to two-stage deammonification in the wastewatertreatment union of Hamburg]. 6. Aachener Tagungmit Informationsforum: Stickstoffrückbelastung-Stand der Technik 2006-, Aachen (Ger) ” . 13 ATEMIS GmbH.p. Fachbeitrag 13 .
  • Lam , P. , Lavik , G. , Jensen , M. M. , van de Vossenberg , J. , Schmid , M. , Woebken , D. , Gutierrez , D. , Amann , R. , Jetten , M. S.M. and Kuypers , M. M.M. 2009 . Revising the nitrogen cycle in the Peruvian oxygen minimum zone. . Proc. Natl Acad. Sci. USA , 106 : 4752 – 4757 .
  • Lamsam , A. , Laohaprapanon , S. and Annachhatre , A. P. 2008 . Combined activated sludge with partial nitrification (AS/PN) and ANAMMOX processes for treatment of seafood processing wastewater . J. Environ. Sci. Health. Part-A Tox. Hazard. Subst. Environ. Eng. , 43 : 1198 – 1208 .
  • Leininger , S. , Urich , T. , Schloter , M. , Schwark , L. , Nicol , J. , Qi , G. W. , Prosser , J. I. , Schuster , S. C. and Schleper , C. 2006 . Archaea predominate among ammonia-oxidizing prokaryotes in soils . Nature , 442 : 806 – 809 .
  • Lieu , P. K. , Hatozaki , R. , Homan , H. and Furukawa , K. 2005 . Single stage nitrogen removal using ANAMMOX and partial nitritation (SNAP) for treatment of synthetic landfill leachate . Jpn. J. Water Treat. Biol. , 41 ( 2 ) : 103
  • Lieu , P. K. , Homan , H. , Kurogl , A. , Kawagoshi , Y. , Fujii , T. and Furukawa , K. 2006 . Characterization of sludge from single-stage nitrogen removal using ANAMMOX and partial nitritation (SNAP) . Jpn. J. Water Treat. Biol. , 42 : 53 – 64 .
  • Lipschultz , F. , Zafiriou , O. C. , Wofsy , S. C. , McElroy , M. B. , Valois , F. W. and Watson , S. W. 1981 . Production of NO and N20 by soil nitrifying bacteria . Nature , 294 : 641 – 643 .
  • Lopez , H. , Puig , S. , Ganigue , R. , Ruscalleda , M. , Balaguer , M. D. and Colprim , J. 2008 . Start-up and enrichment of a granular ANAMMOX SBR to treat high nitrogen load wastewaters . J. Chem. Technol. Biotechnol. , 83 : 233 – 241 .
  • Luther , G. W. , Brendel , P. J. , Lewis , B. L. , Sundby , B. , Lefrancois , L. , Silverberg , N. and Nuzzio , D. B. 1998 . Simultaneous measurement of O2, Mn, Fe, I−, and S2 − in marine pore waters with a solid state voltametric microoelectrode . Limnol. Oceanogr. , 43 : 325 – 333 .
  • Luther , G. W. and Popp , J. I. 2002 . Kinetics of the abiotic reduction of polymeric manganese dioxide by nitrite: An anaerobic nitrification reaction . Aquatic Geochem. , 8 : 15 – 36 .
  • Luther , G. W. , Sundby , B. , Lewis , B. L. , Brendel , P. J. and Silverberg , N. 1997 . Interactions of manganese with the nitrogen cycle: Alternative pathway to dinitrogen . Geochimi. Cosmochim. Acta , 61 : 4043 – 4052 .
  • Massana , R. , DeLong , E. F. and Pedrós-Alió , C. 2000 . A few cosmopolitan phylotypes dominate planktonnic archaeal assemblages in widely different oceanic provinces . Appl. Environ. Microbiol. , 66 : 1777 – 1787 .
  • Meiberg , J. B.M. , Bruinenberg , P. M. and Harder , W. 1980 . Effect of dissolved oxygen tension on the metabolism of methylated amines in hyphomicrobium X in the absence and presence of nitrate: Evidence for ‘aerobic’ denitrification . J. Gen. Microbiol. , 120 : 453 – 463 .
  • Meyer , R. L. , Risgaard-Petersen , N. and Aller , D. E. 2005 . Correlation between anammox activity and the microscale distribution of nitrite in a subtropical mangrove sediment . Appl. Environ. Microbiol. , 71 : 6142 – 6149 .
  • Mortimer , R. J.G. , Krom , M. D. , Harris , S. J. , Hayes , P. J. , Davies , I. M. , Davison , W. and Zhang , H. 2002 . Evidence for complex recycling processes within sedimentary biogeochemical zones . Marine Ecol. Prog. Series , 236 : 31 – 35 .
  • Mosquera-Corral , A. , González , F. , Campos , J. L. and Méndez , R. 2005 . Partial nitrification in a SHARON reactor in the presence of salts and organic carbon compounds . Process Biochem. , 40 : 3109 – 3118 .
  • Mulder , A. 1992 . U.S. Patent No. 5,078,884 , Washington, DC : U.S. Patent and Trademark Office .
  • Mulder , J. W. , van Loosdrecht , M. C.M. , Hellinga , C. and van Kempen , R. 2001 . Full scale application of the SHARON process for treatment of rejection water of digested sludge dewatering . Water Sci. Technol. , 43 ( 11 ) : 127 – 134 .
  • Münch , E. V. , Lant , P. and Keller , J. 1996 . Simultaneous nitrification and denitrification in bench-scale sequencing batch reactors . Water Res. , 30 : 277 – 284 .
  • Nicol , G. W. and Schleper , C. 2006 . Ammonia-oxidising renarchaeota: Important players in the nitrogen cycle? . Trends Microbiol. , 14 : 207 – 212 .
  • Olson , R. J. 1981 . Differential photoinhibition of marine nitrifying bacteria: A possible mechanism for the formation of the primary nitrite maximum . J. Mar. Res. , 39 : 227 – 238 .
  • Paredes , D. , Kuschk , P. , Mbwette , T. S.A. , Stange , F. , Muller , R. A. and Koser , H. 2007 . New aspects of microbial nitrogen transforms in the context of wastewater treatment: A review . Eng. Life Sci. , 7 ( 1 ) : 13 – 25 .
  • Park , H. D. and Noguera , D. R. 2007 . Characterization of two ammonia-oxidizing bacteria isolated from reactors operated with low dissolved oxygen concentrations . J. Appl. Microbiol. , 102 : 1401 – 1417 .
  • Pathak , B. K. , Kazama , F. , Saiki , Y. and Sumino , T. 2007 . Presence and activity of anammox and denitrification process in low ammonium-fed bioreactors . Bioresour. Technol. , 98 : 2201 – 2206 .
  • Peng , Y. , Chen , Y. , Wang , S. , Peng , C. , Liu , M. , Song , X. and Cui , Y. 2004 . Nitrite accumulation by aeration controlled in sequencing batch reactors treating domestic wastewater . Water Sci. Technol. , 50 ( 10 ) : 35 – 43 .
  • Peng , Y. and Zhu , G. 2006 . Biological nitrogen removal with nitrification and denitrification via nitrite pathway . Appl. Environ. Microbiol. , 73 : 15 – 26 .
  • Penton , C. R. , Devol , A. H. and Tiedje , J. M. 2006 . Molecular evidence for the broad distribution of anaerobic ammonium-oxidizing bacteria in freshwater and marine sediments . Appl. Environ. Microbiol. , 72 : 6829 – 6832 .
  • Pochana , K. and Keller , J. 1999 . Study of factors affecting simultaneous nitrification and denitrification (SND) . Water. Sci. Technol. , 39 ( 6 ) : 61 – 68 .
  • Pollice , A. , Tandoi , V. and Lestingi , C. 2002a . Influence of aeration and sludge retention time on ammonium oxidation to nitrite and nitrate . Water Res. , 36 : 2541 – 2546 .
  • Pollice , A. , Valter , T. and Carmela , L. 2002b . Influence of aeration and sludge retention time on ammonium oxidation to nitrite and nitrate . Water Res. , 36 : 2541 – 2546 .
  • Poth , M. 1986 . Dinitrogen production from nitrite by a Nitrosomonas isolate . Appl. Environ. Microbiol. , 52 : 957 – 959 .
  • Poth , M. and Focht , D. D. 1985 . N-15 kinetic-analysis of N2O production by Nitrosomonas europaea: An examination of nitrifier denitrification . Appl. Environ. Microbiol. , 49 : 1134 – 1141 .
  • Pynaert , K. , Smets , B. F. , Wyffels , S. , Beheydt , D. , Siciliano , S. D. and Verstraete , W. 2003 . Characterization of an autotrophic nitrogen-removing biofilm from a highly loaded lab-scale rotating biological contactor . Appl. Environ. Microbiol. , 69 : 3626 – 3635 .
  • Reginatto , V. , Teixeira , R. M. , Pereira , F. , Schmidell , W. , Furigo , A. Jr. , Menes , R. , Etchebehere , C. and Soares , H. M. 2005 . Anaerobic ammonium oxidation in a bioreactor treating slaughterhouse wastewater . Braz. J. Chem. Eng. , 22 : 593 – 600 .
  • Robertson , L. A. 1988 . Aerobic denitrification and heterotrophic nitrification in Thisphaera pantatropha and other bacteria , Delft , , the Netherlands : Doctoral dissertation, Delft University of Technology .
  • Robertson , L. A. , Cornelisse , R. , Vos , D. E. , Hadioetomo , R. and Kuenen , J. G. 1989a . Aerobic denitrification in various heterotrophic nitrifiers . Antonie van Leeuwenhoek , 56 : 289 – 299 .
  • Robertson , L. A. , Cornelisse , R. , Zeng , R. and Kuenen , J. G. 1989b . The effect of thisulphate and other inhibitors of autrophic nitrification on heterotrophic nitrifiers . Antonie van Leeuwenhoek , 56 : 301 – 309 .
  • Robertson , L. A. and Kuenen , J. G. 1983 . Thisphaera pantotropha gen. nov. sp. nov., a facultatively anaerobic, facultatively autotrophic sulphur bacterium . J. Gen Microbiol. , 129 : 2847 – 2855 .
  • Robertson , L. A. and Kuenen , J. G. 1988 . Hetrotrophic nitrification in Thiosphaera pantotropha: Oxygen uptake and enzyme studies . J. Gen. Microbiol. , 134 : 857 – 863 .
  • Robertson , L. A. and Kuenen , J. G. 1990 . Combined heterotrophic nitrification and aerobic denitrification in Thiosphaera pantotropha and other bacteria . Antonie van Leeuwenboek , 57 : 139 – 152 .
  • Robertson , L. A. and Kuenen , J. G. 1992 . “ Aerobic sulphur oxidizing bacteria ” . In The prokaryotes , Edited by: Balows , A. , Truper , H. G. , Dworkin , M. , Harder , W. and Schleifer , K. H. 385 – 413 . Berlin : Springer-Verlag .
  • Sabumon , P. C. 2007 . Anaerobic ammonia removal in presence of organic matter: A novel route . J. Hazard. Mater. , 149 : 49 – 59 .
  • Salem , S. , Berends , D. , van Loosdrecht , M. C.M. and Heijnen , J. J. 2003 . Bioaugmentation by nitrification with return sludge . Water Res. , 37 : 1794 – 1804 .
  • Salem , S. , Berends , D. H.J.G. , van der Roest , H. F. , van der Kuij , R. J. and van Loosdrecht , M. C.M. 2004 . Full scale application of BABE® technology . Water Sci. Technol. , 50 ( 7 ) : 87 – 96 .
  • Schmid , M. C. , Risgaard-Petersen , N. , van de Vossenberg , J. , Kuypers , M. M. , Lavik , G. , Petersen , J. , Hulth , S. , Thamdrup , B. , Canfield , D. , Dalsgaard , T. , Rysgaard , S. , Sejr , M. K. , Strous , M. , den Camp , H. J. and Jetten , M. S. 2007 . Anaerobic ammonium-oxidizing bacteria in marine environments: widespread occurrence but low diversity . Environ. Microbiol. , 9 : 1476 – 1484 .
  • Schmid , M. , Twachtmann , U. , Klein , M. , Strous , M. , Juretschko , S. , Jetten , M. , Metzger , J. , Schleifer , K. H. and Wagner , M. 2000 . Molecular evidence for genus level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation . Syst. Appl. Microbiol. , 23 : 93 – 106 .
  • Schmidt , I. 2009 . Chemoorganoheterotrophic growth of Nitrosomonas europaea and Nitrosomonas eutropha . Curr. Microbiol. , 59 : 130 – 138 .
  • Schmidt , I. and Bock , E. 1997 . Anaerobic ammonia oxidation with nitrogen dioxide by Nitrosomonas eutropha . Arch. Microbiol. , 167 : 106 – 111 .
  • Schmidt , I. and Bock , E. 1998 . Anaerobic ammonia oxidation by cell-free extracts of Nitrosomonas eutropha . Antonie van Leeuwenhoek , 73 : 271 – 278 .
  • Schmidt , I. , Bock , E. and Jetten , M. S.M. 2001a . Ammonia oxidation by Nitrosomonas eutropha with NO2 as oxidant is not inhibited by acetylene . Microbiol. , 147 : 2247 – 2253 .
  • Schmidt , I. , Look , C. , Bock , E. and Jetten , M. S.M. 2004a . Ammonium and hydroxylamine uptake and accumulation in Nitrosomonas . Microbiology , 150 : 1405 – 1412 .
  • Schmidt , I. , Sliekers , O. , Schmid , M. , Bock , E. , Fuerst , J. , Kuenen , J. G. , Jetten , M. S.M. and Strous , M. 2003 . New concepts of microbial treatment processes for the nitrogen removal in wastewater . FEMS Microbiol. Rev. , 27 : 481 – 492 .
  • Schmidt , I. , Sliekers , O. , Schmid , M. , Cirpus , I. , Strous , M. , Bock , E. , Kuenen , J. G. and Jetten , M. S.M. 2002 . Aerobic and anaerobic ammonia oxidizing bacteria—competitors or natural partners? . FEMS Microbiol. Ecol. , 39 : 175 – 181 .
  • Schmidt , I. , van Spanning , R. J.M. and Jetten , M. S.M. 2004b . Denitrification and ammonia oxidation by Nitrosomonas europaea wild-type, and NirK- and NorB-deficient mutants . Microbiology , 150 : 4107 – 4114 .
  • Schmidt , I. , Zart , D. and Bock , E. 2001b . Effects of gaseous NO2 on cells of Nitrosomonas eutropha previously incapable of using ammonia as an energy source . Antonie Van Leeuwenhoek , 79 : 39 – 47 .
  • Schubert , C. J. , Durisch-Kaiser , E. , Wehrli , B. , Thamdrup , B. , Lam , P. and Kuypers , M. M.M. 2006 . Anaerobic ammonium oxidation in a tropical freshwater system (Lake Tanganyika) . Environ Microbiol. , 8 : 1857 – 1863 .
  • Seitzinger , S. P. 1988 . Denitrification in freshwater and marine eco-system: Ecological and geochemical significance . Limnol. Oceanogr. , 33 : 702 – 724 .
  • Seyfried , C. F. , Hippen , A. , Helmer , C. , Kunst , S. and Rosenwinkel , K.-H. 2001 . One-stage deammonification: nitrogen elimination at low costs . Water Sci. Tech; Water Supply , 1 ( 1 ) : 71 – 80 .
  • Shaw , L. J. , Nicol , G. W. , Smith , Z. , Fear , J. , Prosser , J. I. and Baggs , E. M. 2006 . Nitrosospira spp. can produce nitrous oxide via a nitrifier denitrification pathway . Environ. Microbiol. , 8 : 214 – 222 .
  • Shrestha , N. K. , Hadano , S. , Kamachi , T. and Okura , I. 2001 . Conversion of ammonia to dinitrogen in wastewater by Nitrosomonas europaea . Appl. Biochem. Biotechnol. , 90 : 221 – 232 .
  • Siegrist , H. , Reithaar , S. and Lais , P. 1998 . Nitrogen loss in a nitrifying rotating contactor treating ammonium rich leachate without organic carbon . Water Sci. Technol. , 37 ( 4–5 ) : 589 – 591 .
  • Sin , G. , Villez , K. and Vanrolleghem , P. A. 2006 . Application of amodel-based optimization methodology for nutrient removing SBRs leads to falsification of the model . Water Sci. Technol. , 53 ( 4–5 ) : 95 – 103 .
  • Sinha , B. and Annachhatre , A. P. 2007 . Partial nitrification-operational parameters and microorganisms involved . Rev. Environ. Sci. Biotechnol. , 6 : 285 – 313 .
  • Sinninghe Damsté , J. S. , Rijpstra , W. I.C. , Hopmans , E. C. , Prahl , F. G. , Wakeham , S. G. and Schouten , S. 2002a . Distribution of membrane lipids of planktonic Crenarchaeota in the Arabian Sea . Appl. Environ. Microbiol. , 68 : 2997 – 3002 .
  • Sinninghe Damsté , J. S. , Schouten , S. , Hopmans , E. C. , van Duin , A. C.T. and Geenevasen , J. A.J. 2002b . Crenarchaeol: The characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota . J. Lipid Res. , 43 : 1641 – 1651 .
  • Sliekers , A. O. , Derwort , N. , Gomez , J. L. , Strous , M. , Kuenen , J. G. and Jetten , M. S.M. 2002 . Completely autotrophic nitrogen removal over nitrite in one single reactor . Water Res. , 36 : 2475 – 2482 .
  • Sliekers , A. O. , Haaijer , S. , Schmid , M. , Harhangi , H. , Verwegen , K. , Kuenen , J. G. and Jetten , M. S.M. 2004 . Nitrification and ANAMMOX with urea as the energy source . Syst. Appl. Microbiol. , 27 : 271 – 278 .
  • Sliekers , A. O. , Haaijer , S. C.M. , Stafsnes , M. H. , Kuenen , J. G. and Jetten , M. S.M. 2005 . Competition and coexistence of aerobic ammonium and nitrite-oxidizing bacteria at low oxygen concentrations . Appl. Microbiol. Biotechnol. , 68 : 808 – 817 .
  • Sliekers , A. O. , Third , K. A. , Abma , W. , Kuenen , J. G. and Jetten , M. S.M. 2003 . CANON and anammox in a gas-lift reactor . FEMS Microbiol. Lett. , 218 : 339 – 344 .
  • Sørensen , J. , Sørensen , K. S. , Colley , S. , Hydes , D. J. , Thomson , J. and Wilson , T. R.S. 1987 . Depth localization of denitrification in deep-sea sediment from the Maderia Abyssal Plain . Limnol. Oceanogr. , 32 : 758 – 762 .
  • Stein , L. Y. , Arp , D. J. , Berube , P. M. , Chain , P. S. , Hauser , L. , Jetten , M. S. , Klotz , M. G. , Larimer , F. W. , Norton , J. M. , Op den Camp , H. J. , Shin , M. and Wei , X. 2007 . Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: Implications for niche adaptation . Environ. Microbiol. , 9 : 2993 – 3007 .
  • Strous , M. 2000 . Microbiology of anaerobic ammonium oxidation , the Netherlands : Doctoral dissertation, TU Delft .
  • Strous , M. , Fuerst , J. A. , Kramer , E. H.M. , Logemann , S. , Muyzer , G. and van de Pas Schoonen , K. T. 1999a . Missing lithotroph identified as new PlanctomyIcete . Nature , 400 : 446 – 449 .
  • Strous , M. , van Gueven , E. , Kuenen , J. G. and Jetten , M. S.M. 1997 . Ammonia removal from concentrated waste streams with the anaerobic ammonium oxidation (ANAMMOX) process in different reactor configurations . Water Res. , 31 : 1955 – 1962 .
  • Strous , M. , Heijnen , J. J. , Kuenen , J. G. and Jetten , M. S.M. 1998 . The sequencing batch reactor as a powerful tool for the study of slowly growing anaerobic ammonium-oxidizing microorganisms . Appl. Microbiol. Biotechnol. , 50 : 589 – 596 .
  • Strous , M. and Jetten , M. S.M. 2004 . Anaerobic oxidation of methane and ammonium . Annu. Rev. Microbiol. , 58 : 99 – 117 .
  • Strous , M. , Kuenen , J. G. , Fuerst , J. A. , Wagner , M. and Jetten , M. S.M. 2002 . The ANAMMOX case-a new experimental manifesto for microbiological eco-physiology . Antonie van Leeuwenhoek , 81 : 693 – 702 .
  • Strous , M. , Kuenen , J. G. and Jetten , M. S.M. 1999b . Key physiology of anaerobic ammonium oxidation . Appl. Environ. Microbiol. , 65 : 3248 – 3250 .
  • Strous , M. , Pelletier , E. , Mangenot , S. , Rattei , T. , Lehner , A. , Horn , M. Daims , H. 2006 . Deciphering the evolution and metabolism of an anammox bacterium from a community genome . Nature , 440 : 790 – 794 .
  • Stüven , R. , Vollmer , M. and Bock , E. 1992 . The impact of organic matter on nitric oxide formation by Nitrosomonas europaea . Arch. Microbiol. , 158 : 439 – 443 .
  • Sun , S.-P. , Nàcher , C. P. , Merkey , B. , Zhou , Q. , Xia , S.-Q. , Yang , D.-H. , Sun , J.-H. and Smets , B. F. 2010 . Effective biological nitrogen removal treatment processes for domestic wastewaters with low C˭N ratios: A review . Environ. Eng. Sci. , 27 : 111 – 126 .
  • Sutka , R. L. , Ostrom , N. E. , Ostrom , P. H. , Breznak , J. A. , Gandhi , H. , Pitt , A. J. and Li , F. 2006 . Distinguishing nitrous oxide production from nitrification and denitrification on the basis of isotopomer abundances . Appl. Environ. Microbiol. , 72 : 638 – 644 .
  • Tal , Y. , Watts , J. E. and Schreier , H. J. 2005 . Anaerobic ammoniaoxidizing bacteria and related activity in Baltimore inner harbor sediment . Appl. Environ. Microbiol. , 71 : 1816 – 1821 .
  • Tang , C.-J. , Zheng , P. , Chen , P. P. , Zhang , J.-Q. , Mahmood , Q. , Chen , X.-G. , Chen , J.-W. and Wu , D.-T. 2010 . Enhanced nitrogen removal from pharmaceutical wastewater using SBA-ANAMMOX process . Water Res. , 45 : 201 – 210 .
  • Third , K. A. , Paxman , J. , Schmid , M. , Strous , M. , Jetten , M. S.M. and Cord-Ruwisch , R. 2005 . Enrichment of anammox from activated sludge and its application in the CANON process . Microbial. Ecol. , 49 : 236 – 244 .
  • Third , K. A. , Sliekers , A. O. , Kuenen , J. G. and Jetten , M. S.M. 2001 . The CANON system (completely autotrophic nitrogen-removal over nitrite) under ammonium limitation: Interaction and competition between three groups of bacteria . Syst. Appl. Microbiol. , 24 : 588 – 596 .
  • Toh , S. K. and Ashbolt , N. J. 2002 . Adaptation of anaerobic ammonium-oxidizing consortium to synthetic coke-ovens wastewater . Appl. Microbiol. Biotechnol. , 59 : 344 – 352 .
  • Toh , S. K. , Webb , R. I. and Ashbolt , N. J. 2002 . Enrichment of autotrophic anaerobic ammonium-oxidizing consortia from various wastewaters . Microbiol. Ecol. , 43 : 154 – 167 .
  • Treusch , A. H. , Leininger , S. , Kletzin , A. , Schuster , S. C. , Klenk , H. P. and Schleper , C. 2005 . Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling . Environ. Microbiol. , 7 : 1985 – 1995 .
  • Trigo , C. , Campos , J. M. , Garrido , J. M. and Mendez , R. 2006 . Start-up of the anammox process in a membrane bioreactor . J. Biotechnol. , 126 : 475 – 487 .
  • Tsushima , I. , Kindaichi , T. and Okabe , S. 2007 . Quantification of anaerobic ammonium-oxidizing bacteria in enrichment cultures by real-time PCR . Water Res. , 41 : 785 – 794 .
  • Turk , O. and Mavinic , D. S. 1989 . Maintaining nitrite buildup in a system acclimated to free ammonia . Water Res. , 23 : 1383 – 1388 .
  • van de Graaf , A. A. , de Bruijn , P. , Robertson , L. A. , Jetten , M. S.M. and Kuenen , J. G. 1996 . Autotrophic growth of anaerobic ammonium-oxidizing microorganisms in a fluidized bed reactor . Microbiology. , 142 : 2187 – 2196 .
  • van der Star , W. R.L. , Miclea , A. I. , van Dongen , U. G.J.M. , Muyzer , G. , Picioreanu , C. and van Loosdrecht , M. C.M. 2008 . The membrane bioreactor: A novel tool to grow anammox . Biotechnol. Bioeng. , 101 : 286 – 294 .
  • van der Star , W. R.L. , Wiebe , R. , Abma , W. R. , Blommers , D. , Mulder , J. W. , Tokutomi , T. , Strous , M. , Picioreanu , C. and van Loosdrech , M. C.M. 2007 . Startup of reactors for anoxic ammonium oxidation: Experiences from the first full-scale ANAMMOX reactor in Rotterdam . Water Res. , 41 : 4149 – 4163 .
  • van Dongen , U. , Jetten , M. S.M. and van Loosdrecht , M. C.M. 2001 . The SHARON-ANAMMOX process for treatment of ammonium rich wastewater . Water Sci. Technol. , 44 : 153 – 160 .
  • van Hulle , S. W.H. , Vandeweyer , H. J.P. , Meesschaert , B. D. , Vanrolleghem , P. A. , Dejans , P. and Dumoulin , A. 2010 . Engineering aspects and practical application of autotrophic nitrogen removal from nitrogen rich streams . Chem. Eng. J. , 162 : 1 – 20 .
  • van Hulle , S. W.H. , Volcke , E. I.P. , López Teruel , J. , Donckels , B. , van Loosdrecht , M. C.M. and Vanrolleghem , P. A. 2007 . Influence of temperature and pH on the kinetics of the SHARON nitritation process . J. Chem. Technol. Biotechnol. , 82 : 471 – 480 .
  • van Kempen , R. , Mulder , J. W. , Uijterlinde , C. A. and van Loosdrecht , M. C.M. 2001 . Overview: Full scale experience of the SHARON® process for treatment of rejection water of digested sludge dewatering . Water Sci. Technol. , 44 ( 1 ) : 145 – 152 .
  • van Kempen , R. , ten Have , C. C.R. , Meijer , S. C.F. , Mulder , J. W. , Duin , J. O.J. , Uijterlinde , C. A. and van Loosdrecht , M. C.M. 2005 . SHARON process evaluated for improved wastewater treatment plant effluent quality . Water Sci. Technol. , 52 ( 4 ) : 55 – 62 .
  • van Loosdrecht , M. C.M. , Ha , O. X. , Jetten , M. S.M. and Abma , W. 2004 . Use of ANAMMOX in urban wastewater treatment . Water Sci. Technol.; Water Supply. , 4 ( 1 ) : 87 – 94 .
  • van Niel , E. W.J. , Robertson , L. A. and Kuenen , J. G. 1987 . Heterotrophic nitrification in denitrifying bacteria . Proc. 4th Eur. Cong. Biotechnol. , 3 : 363
  • van Niftrik , L. A. , Fuerst , J. A. , Sinninghe Damst , J. S. , Kuenen , J. G. , Jetten , M. S.M. and Strous , M. 2004 . The anammoxosome: an intracytoplasmic compartment in anammox bacteria . FEMS Microbiol. Lett. , 233 : 7 – 13 .
  • Vazquez-Padin , J. R. , Fernádez , I. , Figueroa , M. , Mosquera-Corral , A. , Campos , J. L. and Mendez , R. 2009a . Applications of anammox based processes to treat anaerobic digester supernatant at room temperature . Bioresour. Technol. , 100 : 2988 – 2994 .
  • Vazquez-Padin , J. R. , Pozo , M. J. , Jarpa , M. , Figueroa , M. , Franco , A. , Mosquera-Corral , A. , Campos , J. L. and Mendez , R. 2009b . Treatment of anaerobic sludge digester effluents by the CANON process in an air pulsing SBR . J. Hazard. Mater. , 166 : 336 – 341 .
  • Venter , J. C. , Remington , K. , Heidelberg , J. F. , Halpern , A. L. , Rusch , D. Eisen , J. A. 2004 . Environmental genome shotgun sequencing of the Sargasso Sea . Science , 304 : 66 – 74 .
  • Verstraete , W. 1975 . Heterotrophic nitrification in soils and aqueous media . Izvestija Akademi NAuk SSSR Ser. Bio. , 4 : 541 – 558 .
  • Vlaeminck , S. E. , Cloetens , L. F.F. , de Clippeleir , H. , Carballa , M. and Verstraete , W. 2009a . Grannular biomass capable of partial nitritation and ANAMMOX . Water Sci. Technol. , 59 : 610 – 617 .
  • Vlaeminck , S. E. , Terada , A. , Smets , B. F. , van der Linden , D. , Boon , N. , Verstraete , W. and Carballa , M. 2009b . Nitrogen removal from digested black water by one-stage partial nitritation and ANAMMOX . Environ. Sci. Technol. , 43 : 5035 – 5041 .
  • Voysey , P. A. and Wood , P. M. 1987 . Methanol and formaldehyde oxidation by an autotrophic nitrifying bacterium . J. Gen. Microbiol. , 133 : 283 – 290 .
  • Waki , M. , Tokutomi , T. , Yokoyama , H. and Tanaka , Y. 2007 . Nitrogen removal from animal waste treatment water by ANAMMOX enrichment . Bioresour. Technol. , 98 : 2775 – 2780 .
  • Wang , C. C. , Lee , P. H. , Kumar , M. , Huang , Y. T. , Sung , S. and Lin , J. G. 2010 . Simultaneous partial nitrification, anaerobic ammonium oxidation and denitrification (SNAD) in a full-scale landfill-leachate treatment plant . J. Hazard. Mater. , 175 : 622 – 628 .
  • Wang , J. and Kang , J. 2005 . The characteristics of anaerobic ammonia oxidation (ANAEROBIC AMMONIA REMOVAL) by granular sludge from an ESGB reactor . Process Biochem. , 40 : 1973 – 1978 .
  • Wang , T. , Zhang , H. , Yang , F. , Liu , S. , Fu , Z. and Chen , H. 2009 . Start-up of the anammox process from the conventional activated sludge in a membrane bioreactor . Bioresour. Technol. , 100 : 2501 – 2506 .
  • Ward , B. B. , Devol , A. H. , Rich , J. J. , Chang , B. X. , Bulow , S. E. , Naik , H. , Pratihary , A. and Jayakumar , A. 2009 . Denitrification as the dominant nitrogen loss process in the Arabian Sea . Nature , 461 : 78 – 81 .
  • Wett , B. 2006 . Solved up-scaling problems for implementing deammonification of rejection water . Water Sci. Technol. , 53 ( 12 ) : 121 – 128 .
  • Wett , B. 2007 . Development and implementation of a robust deammonification process . Water Sci. Technol. , 56 ( 7 ) : 81 – 88 .
  • Woebken , D. , Lam , P. , Kuypers , M. M.M. , Naqvi , S. W.A. , Kartal , B. , Strous , M. , Jetten , M. S. , Fuchs , B. M. and Amann , R. 2008 . A microdiversity study of marine anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones . Environ. Microbiol. , 10 : 3106 – 3119 .
  • Wrage , N. , Velthof , G. L. , Oenema , O. and Laanbroek , H. J. 2004 . Acetylene and oxygen as inhibitors of nitrous oxide production in Nitrosomonas europaea and Nitrosospira briensis: A cautionary tale . FEMS Microbiol. Ecol. , 47 : 13 – 18 .
  • Wrage , N. , Velthof , G. L. , van Beusichem , M. L. and Oenema , O. 2001 . Role of nitrifier denitrification in the production of nitrous oxide . Soil. Biol. Biochem. , 33 : 1723 – 1732 .
  • Wyffels , S. , Boeckx , P. , Pynaert , K. , Zhang , D. , van Cleemput , O. , Chen , G. and Verstraete , W. 2004 . Nitrogen removal from sludge reject water by a two-stage oxygen limited autotrophic nitrification denitrification process . Water Sci. Technol. , 49 ( 5–6 ) : 57 – 64 .
  • Xu , Z. Y. , Zeng , G. M. , Yang , Z. H. , Xiao , Y. , Cao , M. , Sun , H. S. , Ji , L. L. and Chen , Y. 2010 . Biological treatment of landfill leachate with the integration of partial nitrification, anaerobic ammonium oxidation and heterotrophic denitrification . Bioresour. Technol. , 101 : 79 – 86 .
  • Yang , L. and Alleman , J. E. 1992 . Investigation of batchwise nitrite build-up by an enriched nitrification culture . Water Sci. Technol. , 26 : 997 – 1005 .
  • Zart , D. and Bock , E. 1998 . High rate of aerobic nitrification and denitrification by Nitrosomonas eutropha grown in a fermenter with complete biomass retention in the presence of gaseous NO2 or NO . Arch. Microbiol. , 169 : 282 – 286 .
  • Zart , D. , Schmidt , I. and Bock , E. 2000 . Significance of gaseous NO for ammonia oxidation by Nitrosomonas eutropha . Antonie van Leeuwenhoek , 77 : 49 – 55 .
  • Zehr , J. P. and Ward , B. B. 2002 . Nitrogen cycling in the ocean: New perspectives on processes and paradigms . Appl. Environ. Microbiol. , 68 : 1015 – 1024 .
  • Zhang , L. , Zheng , P. , Tang , C-J. and Jin , R-C. 2008 . Anaerobic ammonium oxidation for treatment of ammonium-rich wastewaters . J. Zhejiang Univ. Sci B. , 9 : 416 – 426 .
  • Zhang , M. , Tay , J. H. , Qian , Y. and Gu , X. S. 1998 . Coke plant wastewater treatment by fixed biofilm system for COD and NH3 removal . Water Res. , 32 : 519 – 527 .
  • Zumft , W. G. 1997 . Cell biology and molecular basis of denitrification . Microbiol. Mol. Biol. Rev. , 61 : 533 – 616 .

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