Signal transduction profiling using label-free biosensors

References

• Uetz P et al. A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature 2000;403:623.
   PubMed Web of Science ®Google Scholar
• Oliver S. Guilt-by-association goes global. Nature 2000;403:601.
   PubMed Web of Science ®Google Scholar
• Heyse S et al. Emerging techniques for investigating molecular interactions at lipid membranes. Biochim Biophys Acta 1998;85507:319.
   Google Scholar
• Sackmann E, Tanaka M. Supported membranes on soft polymer cushions: Fabrication, characterization and applications. Trends Biotech 2000;18:58.
   PubMed Web of Science ®Google Scholar
• Foord SM et al. International Union of Pharmacology. XLVI.G protein-coupled receptor list. Pharmacol Rev 2005;57:279.
   PubMed Web of Science ®Google Scholar
• Drews J. Drug discovery: A historical perspective. Science 2000;287:1960.
   PubMed Web of Science ®Google Scholar
• Zhang Y et al. Structure modeling of all identified G protein-coupled receptors in the human genome. PLoS Comput Biol 2006;2:e13.
   PubMed Web of Science ®Google Scholar
• Terstappen GC, Angelo R. In silico research in drug discovery. Trends Pharmacol Sci 2001;22:23.
   PubMed Web of Science ®Google Scholar
• Shukla AK et al. Distinct conformational changes in beta-arrestin report biased agonism at seven-transmembrane receptors. Proc Natl Acad Sci U S A 2008;105:9988.
   Google Scholar
• Sato M et al. The beta3-adrenoceptor agonist 4-[[(Hexylamino)carbonyl]amino]-N-[4-[2-[[(2S)-2-hydroxy-3-(4- hydroxypheno xy)propyl]amino]ethyl]-phenyl]-benzenesulfonamide (L755507) and antagonist (S)-N-[4-[2-[[3-[3-(acetamidomethyl)phenoxy]-2-hydroxypropyl]amino]-ethyl] phenyl]benzenesulfonamide (L748337) activate different signaling pathways in Chinese hamster ovary-K1 cells stably expressing the human beta3-adrenoceptor. Mol Pharmacol 2008;74:1417.
   Google Scholar
• Galandrin S et al. Conformational rearrangements and signaling cascades involved in ligand-biased mitogen-activated protein kinase signaling through the beta1-adrenergic receptor. Mol Pharmacol 2008;74:162.
   PubMed Web of Science ®Google Scholar
• Kenakin T. Collateral efficacy in drug discovery: Taking advantage of the good (allosteric) nature of 7TM receptors. Trends Pharmacol Sci 2007;28:407.
   PubMed Web of Science ®Google Scholar
• Hawes BE et al. Distinct pathways of Gi- and Gq-mediated mitogen-activated protein kinase activation. J Biol Chem 1995;270:17148.
   PubMedGoogle Scholar
• Luttrell LM et al. G beta gamma subunits mediate mitogen- activated protein kinase activation by the tyrosine kinase insulin-like growth factor 1 receptor. J Biol Chem 1995;270:16495.
   PubMed Web of Science ®Google Scholar
• Faure M et al. cAMP and beta gamma subunits of heterotrimeric G proteins stimulate the mitogen-activated protein kinase pathway in COS-7 cells. J Biol Chem 1994;269:7851.
   PubMedGoogle Scholar
• Chan LL et al. A label-free photonic crystal biosensor imaging method for detection of cancer cell cytotoxicity and proliferation. Apoptosis 2007;12:1061.
   PubMed Web of Science ®Google Scholar
• Choi CJ, Cunningham BT. A 96-well microplate incorporating a replica molded microfluidic network integrated with photonic crystal biosensors for high throughput kinetic biomolecular interaction analysis. Lab Chip 2007;7:550.
   PubMed Web of Science ®Google Scholar
• Cunningham BT et al. Label-free assays on the BIND system. J Biomol Screen 2004;9:481.
   PubMed Web of Science ®Google Scholar
• O’Malley SM et al. Label-free high-throughput functional lytic assays. J Biomol Screen 2007;12:117.
   PubMed Web of Science ®Google Scholar
• Fang Y, Ferrie AM. Optical biosensor differentiates signaling of endogenous PAR1 and PAR2 in A431 cells. BMC Cell Biol 2007;8:24.
   PubMedGoogle Scholar
• Fang Y, Ferrie AM. Label-free optical biosensor for ligand- directed functional selectivity acting on beta(2) adrenoceptor in living cells. FEBS Lett 2008;582:558.
   PubMed Web of Science ®Google Scholar
• Hamdan FF et al. Unraveling G protein-coupled receptor endocytosis pathways using real-time monitoring of agonist-promoted interaction between beta-arrestins and AP-2. J Biol Chem 2007;282:29089.
   Google Scholar
• Li JH et al. Distinct structural changes in a G protein-coupled receptor caused by different classes of agonist ligands. J Biol Chem 2007;282:26284.
   PubMed Web of Science ®Google Scholar
• Sutherland RM, Dahne C. Biosensors: Fundamentals and Applications. Turner APF, Karube I, Wilson GS, eds. New York: Oxford University Press, 1987.
   Google Scholar
• Burstein E et al. Surface polaritons—Propagating electromagnetic modes at interfaces. J Vac Sci Technol 1974;11:1004.
   Web of Science ®Google Scholar
• Bernard B, Lengeler B. Electronic structure of noble metals and polariton-mediated light scattering. In: Agranovich VM, Mills DL, eds. Springer Tracts in Modern Physics. Berlin: Springer-Verlag, 1978, vol. 82.
   Google Scholar
• Liedberg B et al. Surface plasmon resonance for gas detection and biosensing. Lab Sensors and Actuators 1983;4:299.
   Web of Science ®Google Scholar
• Flanagan MT, Pantell RH. Surface plasmon resonance and immunosensors. Electron Lett 1984;20:968.
   Google Scholar
• Homola J et al. Surface plasmon resonance sensors: Review. Sensors and Actuators 1999;B 54:3.
   Google Scholar
• Leatherbarrow RJ, Edwards PR. Analysis of molecular recognition using optical biosensors. Curr Opin Chem Biol 1999;3:544.
   Google Scholar
• Mullett WM et al. Surface plasmon resonance-based immunoassays. Methods 2000;22:77.
   PubMed Web of Science ®Google Scholar
• McDonnell JM. Surface plasmon resonance: Towards an understanding of the mechanisms of biological molecular recognition. Curr Opin Chem Biol 2001;5:572.
   PubMed Web of Science ®Google Scholar
• Myszka DG. Survey of the 1998 optical biosensor literature. J Mol Recogn 1999;12:390.
   Google Scholar
• Rich RL, Myszka DG. Survey of the 1999 surface plasmon resonance biosensor literature. J Mol Recogn 2000:13:388.
   PubMed Web of Science ®Google Scholar
• Myszka DG, Rich RL. Implementing surface plasmon resonance biosensors in drug discovery. Pharm Sci Tech Today 2000;3:310.
   PubMedGoogle Scholar
• Weimar T. Recent trends in the application of evanescent wave biosensors. Angew Chem Int Ed 2000;39:1219.
   PubMed Web of Science ®Google Scholar
• Ziegler C, Gopel W. Biosensor development. Curr Opin Chem Biol 1998;2:585.
   PubMed Web of Science ®Google Scholar
• Cooper MA. Optical biosensors in drug discovery. Nat Rev Drug Discov 2002;1:515.
   PubMed Web of Science ®Google Scholar
• Cooper MA. Biosensor profiling of molecular interactions in pharmacology. Curr Opin Pharmacol 2003:3:557.
   PubMed Web of Science ®Google Scholar
• Roos H et al. Thermodynamic analysis of protein interactions with biosensor technology. J Mol Recog 1998;11:204.
   PubMed Web of Science ®Google Scholar
• Zeder-Lutz G et al. Thermodynamic analysis of antigen- antibody binding using biosensor measurements at different temperatures. Anal Biochem 1997;246:123.
   Google Scholar
• Ellson CD et al. PtdIns(3)P regulates the neutrophil oxidase complex by binding to the PX domain of p40(phox). Nat Cell Biol 2001;3:679.
   PubMed Web of Science ®Google Scholar
• Ellson CD et al. PtdIns(3)P regulates the neutrophil oxidase complex by binding to the PX domain of p40(phox). Nat Cell Biol 2001;3:679.
   PubMed Web of Science ®Google Scholar
• Stahelin RV et al. Membrane binding mechanisms of the PX domains of NADPH oxidase p40phox and p47phox. J Biol Chem 2003;278:14469.
   Google Scholar
• Karathanassis D et al. Binding of the PX domain of p47(phox) to phosphatidylinositol 3,4-bisphosphate and phosphatidic acid is masked by an intramolecular interaction. Embo J 2002;21:5057.
   PubMed Web of Science ®Google Scholar
• Karlsson OP, Lofas S. Flow-mediated on-surface reconstitution of G-protein coupled receptors for applications in surface plasmon resonance biosensors. Anal Biochem 2002;300:132.
   Google Scholar
• Bieri C et al. Micropatterned immobilization of a G protein-coupled receptor and direct detection of G protein activation. Nat Biotech 1999;17:1105.
   PubMed Web of Science ®Google Scholar
• Navratilova I et al. Solubilization, stabilization, and purification of chemokine receptors using biosensor technology. Anal Biochem 2005;339:271.
   PubMedGoogle Scholar
• Navratilova I et al. Analyzing ligand and small molecule binding activity of solubilized GPCRs using biosensor technology. Anal Biochem 2006;355:132.
   PubMedGoogle Scholar
• Harding PJ et al. Neurotensin receptor type 1. Escherichia coli expression, purification, characterization and biophysical study. Biochem Soc Trans 2007;35:760.
   Google Scholar
• Harding PJ et al. Direct analysis of a GPCR-agonist interaction by surface plasmon resonance. Eur Biophys J 2006;35:709.
   PubMed Web of Science ®Google Scholar
• Komolov KE et al. Surface plasmon resonance study of g protein/receptor coupling in a lipid bilayer-free system. Anal Chem 2006;78:1228.
   PubMedGoogle Scholar
• Sauerbrey G. Verwendung von Schwingquarzen zur Wagung dunner Schichten und zur Microwagang. Z Phys 1959;155:206.
   Google Scholar
• Nomura T, Okuhara M. Frequency-shifts of piezoelectric quartz crystals immersed in organic liquids. Anal Chim Acta 1982;142:281.
   Web of Science ®Google Scholar
• Pavey KD et al. Quartz crystal resonant sensor (QCRS) model for label-free, small molecules-receptor studies. Analyst 2001;126:1711.
   Google Scholar
• Pope LP, M. C. D. Allen S, Roberts CJ, Tendler SJB, Williams PM. Probing DNA duplex formation and DNA-drug interactions by the quartz crystal microbalance technique. Langmuir 2001;17:8300.
   Google Scholar
• Pavey KD et al. Vitamin C induced decomposition of lipid hydroperoxides: Direct evidence of genotoxin-DNA binding detected by QCRS. Chem Commun 2001;18:1886.
   Google Scholar
• Furtado LM et al. Interactions of HIV-1 TAR RNA with Tat-derived peptides discriminated by on-line acoustic wave detector. Anal Chem 1999;71:1167.
   Google Scholar
• Thompson M, Su HB. Realtime detection of HIV-1 TAR RNA/Tat peptide interactions by acoustic wave biosensor. Abstracts of Papers of the American Chemical Society 1996;212:80.
   Google Scholar
• Thompson M et al. Comparison of detection of RNA-peptide interactions by surface plasmon resonance and acoustic wave transmission. Abstracts of Papers of the American Chemical Society 1997;213:213.
   Google Scholar
• Aizawa H et al. Conventional diagnosis of C-reactive protein in serum using latex piezoelectric immunoassay. Sensors and Actuators B-Chemical 2001;76:173.
   Google Scholar
• BenDov I et al. Piezoelectric immunosensors for urine specimens of Chlamydia trachomatis employing quartz crystal microbalance microgravimetric analyses. Anal Chem 1997;69:3506.
   Google Scholar
• Percival CJ et al. Molecular imprinted polymer coated QCM for the detection of nandrolone. Analyst 2002;127:1024.
   PubMed Web of Science ®Google Scholar
• Richert L et al. Cell interactions with polyelectrolyte multilayer films. Biomacromolecules 2002;3:1170.
   PubMed Web of Science ®Google Scholar
• Rodahl M et al. Simultaneous frequency and dissipation factor QCM measurements of biomolecular adsorption and cell adhesion. Faraday Discussions 1997;229.
   Google Scholar
• Fredriksson C et al. The piezoelectric quartz crystal mass and dissipation sensor: A means of studying cell adhesion. Langmuir 1998;14:248.
   Web of Science ®Google Scholar
• Shinohara H. Real time monitoring of growth and adhesion of cultured mammalian cells with quartz crystal microbalance systems and its applications. Electrochemistry 1999;67:280.
   Google Scholar
• Ebato H et al. Detection of Cell-Adhesion Behaviors by Using a Quartz-Crystal Microbalance. Kobunshi Ronbunshu 1993;50:463.
   Google Scholar
• Gryte DM et al. Real-time measurement of anchorage-dependent cell-adhesion using a quartz crystal microbalance. Biotechnol Prog 1993;9:105.
   PubMed Web of Science ®Google Scholar
• Ebersole RC et al. Piezoelectric cell-growth sensor. Bio-Technology 1991;9:450.
   PubMedGoogle Scholar
• Braunhut SJ et al. Endothelial cell (EC) adhesion and spreading studied with the quartz crystal microbalance (QCM). Mol Biol Cell 1999;10:64a.
   Google Scholar
• Wegener J et al. Analysis of the composite response of shear wave resonators to the attachment of mammalian cells. Biophys J 2000;78:2821.
   PubMed Web of Science ®Google Scholar
• Thompson M, Hayward GL. Paper presented at the IEEE International Frequency Control Symposium, 1997.
   Google Scholar
• Janshoff A et al. Piezoelectric mass-sensing devices as biosensors—An alternative to optical biosensors? Angewandte Chemie-International Edition 2000;39:4004.
   PubMed Web of Science ®Google Scholar
• Hepel M. Ion channeling phenomena and Tl-upd induced film dynamics in model biomembranes studied with EQCN and QCI techniques. J Electroanal Chem 2001;509:90.
   Web of Science ®Google Scholar
• Amemiya S, Umezawa Y. Chemical sensing based on molecular recognition at membrane surfaces. J Synthetic Organic Chem Japan 1997;55:436.
   Google Scholar
• Buhlmann P et al. Chemical sensing with chemically modified electrodes that mimic gating at biomembranes incorporating ion-channel receptors. Electroanalysis 1998;10:1149.
   Google Scholar
• Kobayashi A et al. Adsorption properties and activities of lipase on a gold substrate modified by self-assembled monolayers. Biosci Biotechnol Biochem 2001;65:2392.
   PubMed Web of Science ®Google Scholar
• Phadtare S. Penicillin G acylase-fatty lipid biocomposite films show excellent catalytic activity and long term stability/reusability. Biotechnol Prog 2002;18:483.
   Google Scholar
• Caseli L et al. Enzymatic activity of alkaline phosphatase adsorbed on dimyristoylphosphatidic acid Langmuir-Blodgett films. Colloids Surfaces B-Biointerfaces 2002;25:119.
   Web of Science ®Google Scholar
• Snejdarkova M et al. Glucose biosensors based on dendrimer monolayers. J Mater Sci-Mater Med 2001;12:1079.
   Google Scholar
• Sun SC et al. Preparation of active Langmuir-Blodgett-films of glucose-oxidase. Langmuir 1991;7:727.
   Web of Science ®Google Scholar
• Rhoten MC et al. The reaction of cytochrome c with bovine and Bacillus stearothermophilus cytochrome c oxidase immobilized in electrode-supported lipid bilayer membranes. J Electroanal Chem 2002;535:97.
   Google Scholar
• Miura Y et al. Self-assembled monolayers of globotriaosylceramide (Gb3) mimics: surface-specific affinity with shiga toxins. Anal Biochem 2002;310:27.
   Google Scholar
• Janshoff A et al. Specific binding of peanut agglutinin to G(M1)-doped solid supported lipid bilayers investigated by shear wave resonator measurements. Eur Biophys J Biophys Lett 1996;25:105.
   Google Scholar
• Sato T et al. Binding of influenza A virus to monosialoganglioside (GM(3)) reconstituted in glucosylceramide and sphingomyelin membranes. Biochim Biophys Acta-Biomembranes 1996;1285:14.
   Google Scholar
• Braunhut SJ et al. Detection of apoptosis and drug resistance of human breast cancer cells to taxane treatments using quartz crystal microbalance biosensor technology. Assay Drug Dev Technol 2005;3:77.
   PubMed Web of Science ®Google Scholar
• Marx KA et al. A quartz crystal microbalance cell biosensor: Detection of microtubule alterations in living cells at nM nocodazole concentrations. Biosens Bioelectron 2001;16:773.
   PubMed Web of Science ®Google Scholar
• Marxer CM et al. Cell spreading on quartz crystal microbalance elicits positive frequency shifts indicative of viscosity changes. Anal Bioanal Chem 2003;377:578.
   PubMedGoogle Scholar
• Hama H et al. Evidence indicating that renal tubular metabolism of leptin is mediated by megalin but not by the leptin receptors. Endocrinology 2004;145:3935.
   Google Scholar
• Li PCH et al. An acoustic wave sensor incorporated with a microfluidic chip for analyzing muscle cell contraction. Analyst 2003;128:225.
   Google Scholar
• Pax M et al. Measurements of fast fluctuations of viscoelastic properties with the quartz crystal microbalance. Analyst 2005;130:1474.
   PubMed Web of Science ®Google Scholar
• Jenkins MS et al. Quartz crystal microbalance-based measurements of shear-induced senescence in human embryonic kidney cells. Biotechnol Bioeng 2004;88:392.
   PubMed Web of Science ®Google Scholar
• Cans AS et al. Measurement of the dynamics of exocytosis and vesicle retrieval at cell populations using a quartz crystal microbalance. Anal Chem 2001;73:5805.
   PubMed Web of Science ®Google Scholar
• Heitmann V et al. The Quartz Crystal Microbalance in Cell Biology: Basics and Applications. In: C. Steinem, A. Janshoff, eds. Piezoelectric Sensors. Berlin Heidelberg: Springer-Verlag, 2006;5:303–41.
   Google Scholar