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Original Articles

Analysis of Human Plasma Proteome by 2DE‐ and 2D nanoLC‐Based Mass Spectrometry

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Pages 3-17 | Received 20 Jun 2005, Accepted 05 Aug 2005, Published online: 07 Feb 2007

References

  • Georgiou , H. M. , Rice , G. E. and Baker , M. S. 2001 . Proteomic analysis of human plasma: failure of centrifugal ultrafiltration to remove albumin and other high molecular weight proteins . Proteomics , 1 ( 12 ) : 1503 – 1506 .
  • Ahmed , N. , Barker , G. , Oliva , K. , Garfin , D. , Talmadge , K. , Georgiou , H. , Quinn , M. and Rice , G. 2003 . An approach to remove albumin for the proteomic analysis of low abundance biomarkers in human serum . Proteomics , 3 ( 10 ) : 1980 – 1987 .
  • Wang , D. A. , Chen , B. L. , Ji , J. and Feng , L. X. 2002 . Selective adsorption of serum albumin on biomedical polyurethanes modified by a poly(ethylene oxide) coupling‐polymer with cibacron blue (F3G‐A) endgroups . Bioconj. Chem. , 13 ( 4 ) : 792 – 803 .
  • Camli , S. T. , Senel , S. and Tuncel , A. 1999 . Cibacron blue F3G‐A‐attached uniform and macroporous poly(styrene‐co‐divinylbenzene) particles for specific albumin adsorption . J. Biomater. Sci. Polym. Ed. , 10 ( 8 ) : 875 – 889 .
  • Lollo , B. A. , Harvey , S. , Liao , J. , Stevens , A. C. , Wagenknecht , R. , Sayen , R. , Whaley , J. and Sajjadi , F. G. 1999 . Improved two‐dimensional gel electrophoresis representation of serum proteins by using ProtoClear . Electrophoresis , 20 ( 4–5 ) : 854 – 859 .
  • Wang , Y. Y. , Cheng , P. and Chan , D. W. 2003 . A simple affinity spin tube filter method for removing high‐abundant common proteins or enriching low‐abundant biomarkers for serum proteomic analysis . Proteomics , 3 ( 3 ) : 243 – 248 .
  • Pieper , R. , Su , Q. , Gatlin , C. L. , Huang , S. T. , Anderson , N. L. and Steiner , S. 2003 . Multi‐component immunoaffinity subtraction chromatography: an innovative step towards a comprehensive survey of the human plasma proteome . Proteomics , 3 ( 4 ) : 422 – 432 .
  • Schmidt , E. and Schmidt , F. W. 1982 . Fundamentals and evaluation of enzyme patterns in serum . Prog. Liver Dis. , 7 : 411 – 428 .
  • Poon , T. C. and Johnson , P. J. 2001 . Proteome analysis and its impact on the discovery of serological tumor markers . Clin. Chim. Acta , 313 ( 1–2 ) : 231 – 239 .
  • Katus , H. A. , Remppis , A. , Looser , S. , Hallermeier , K. , Scheffold , T. and Kubler , W. 1989 . Enzyme linked immuno assay of cardiac troponin T for the detection of acute myocardial infarction in patients . J. Mol. Cell Cardiol. , 21 ( 12 ) : 1349 – 1353 .
  • Drexel , H. , Dworzak , E. , Kirchmair , W. , Milz , M. M. , Puschendorf , B. and Dienstl , F. 1983 . Myoglobinemia in the early phase of acute myocardial infarction . Am. Heart J. , 105 ( 4 ) : 642 – 651 .
  • Papsidero , L. D. , Wang , M. C. , Valenzuela , L. A. , Murphy , G. P. and Chu , T. M. 1980 . A prostate antigen in sera of prostatic cancer patients . Cancer Res. , 40 ( 7 ) : 2428 – 2432 .
  • Bast , R. C. Jr. , Urban , N. , Shridhar , V. , Smith , D. , Zhang , Z. , Skates , S. , Lu , K. , Liu , J. , Fishman , D. and Mills , G. 2002 . Early detection of ovarian cancer: promise and reality . Cancer Treat. Res. , 107 : 61 – 97 .
  • Adam , B. L. , Vlahou , A. , Semmes , O. J. and Wright , G. L. Jr. 2001 . Proteomic approaches to biomarker discovery in prostate and bladder cancers . Proteomics , 1 ( 10 ) : 1264 – 1270 .
  • Fung , K. Y. , Glode , L. M. , Green , S. and Duncan , M. W. 2004 . A comprehensive characterization of the peptide and protein constituents of human seminal fluid . Prostate , 61 ( 2 ) : 171 – 181 .
  • James , P. , Quadroni , M. , Carafoli , E. and Gonnet , G. 1993 . Protein identification by mass profile fingerprinting . Biochem. Biophys. Res. Comm. , 195 ( 1 ) : 58 – 64 .
  • Mann , M. , Hojrup , P. and Roepstorff , P. 1993 . Use of mass spectrometric molecular weight information to identify proteins in sequence databases . Biol. Mass Spectrom. , 22 ( 6 ) : 338 – 345 .
  • McCormack , A. L. , Schieltz , D. M. , Goode , B. , Yang , S. , Barnes , G. , Drubin , D. and Yates , J. R. 1997 . 3rd Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low‐femtomole level . Anal. Chem. , 69 ( 4 ) : 767 – 776 .
  • Davis , M. T. , Beierle , J. , Bures , E. T. , McGinley , M. D. , Mort , J. , Robinson , J. H. , Spahr , C. S. , Yu , W. , Luethy , R. and Patterson , S. D. 2001 . Automated LC‐LC‐MS‐MS platform using binary ion‐exchange and gradient reversed‐phase chromatography for improved proteomic analyses . J. Chromatogr. B: Biomed. Sci. Appl. , 752 ( 2 ) : 281 – 291 .
  • Nagele , E. , Vollmer , M. and Horth , P. 2003 . Two‐dimensional nano‐liquid chromatography‐mass spectrometry system for applications in proteomics . J. Chromatogr. A , 1009 ( 1–2 ) : 197 – 205 .
  • Travis , J. , Bowen , J. , Tewksbury , D. , Johnson , D. and Pannell , R. 1976 . Isolation of albumin from whole human plasma and fractionation of albumin‐depleted plasma . Biochem. J. , 157 ( 2 ) : 301 – 306 .
  • Link , A. J. , Eng , J. , Schieltz , D. M. , Carmack , E. , Mize , G. J. , Morris , D. R. , Garvik , B. M. and Yates , J. R. 1999 . 3rd Direct analysis of protein complexes using mass spectrometry . Nat. Biotechnol. , 17 ( 7 ) : 676 – 682 .
  • Leatherbarrow , R. J. and Dean , P. D. 1980 . Studies on the mechanism of binding of serum albumins to immobilized cibacron blue F3G‐A . Biochem. J. , 189 ( 1 ) : 27 – 34 .
  • Naval , J. , Calvo , M. , Lampreave , F. and Pineiro , A. 1982 . Interactions of different albumins and animal sera with insolubilized cibacron blue, evaluation of apparent affinity constants . Comp. Biochem. Physiol. B , 71 ( 3 ) : 403 – 407 .
  • Thompson , S. T. , Cass , K. H. and Stellwagen , E. 1975 . Blue dextran‐sepharose: an affinity column for the dinucleotide fold in proteins . Proc. Natl. Acad. Sci. USA , 72 ( 2 ) : 669 – 672 .
  • Lagercrantz , C. and Larsson , T. 1983 . Comparative studies of the binding of some ligands to human serum albumin non‐covalently attached to immobilized cibacron blue, or covalently immobilized on sepharose, by column affinity chromatography . Biochem. J. , 213 ( 2 ) : 387 – 390 .
  • Pieper , R. , Gatlin , C. L. , Makusky , A. J. , Russo , P. S. , Schatz , C. R. , Miller , S. S. , Su , Q. , McGrath , A. M. , Estock , M. A. , Parmar , P. P. , Zhao , M. , Huang , S. T. , Zhou , J. , Wang , F. , Esquer‐Blasco , R. , Anderson , N. L. , Taylor , J. and Steiner , S. 2003 . The human serum proteome: display of nearly 3700 chromatographically separated protein spots on two‐dimensional electrophoresis gels and identification of 325 distinct proteins . Proteomics , 3 ( 7 ) : 1345 – 1364 .

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