Partial characterization of Bacillus pumilus catalase partitioned in poly(ethylene glycol)/sodium sulfate aqueous two-phase systems

References

• Loewen, P.C. The Encyclopedia of Molecular Biology. Eds.; John Wiley & Sons, New York: Creighton, T, 1999; 351–353 pp.
   Google Scholar
• Switala, J.; Loewen, P.C. Diversity of Properties among Catalases. Arch. Biochem. Biophys. 2002, 401, 145–154. DOI: 10.1016/S0003-9861(02)00049-8.
   PubMed Web of Science ®Google Scholar
• Loncar, N.; Fraaije, M.W. Not So Monofunctional-A Case of the Thermostable Thermobifida fusca Catalase with Peroxidase Activity. Appl. Microbiol. Biotechnol. 2015, 99, 2225–2232. DOI: 10.1007/s00253-014-6060-5.
   PubMed Web of Science ®Google Scholar
• Chelikani, P.; Fita, I.; Loewen, P.C. Diversity of Structures and Properties among Catalases. Cell. Mol. Life. Sci. 2004, 61, 192–208. DOI: 10.1007/s00018-003-3206-5.
   PubMed Web of Science ®Google Scholar
• Walker, G.E.; Dunbar, B.; Hunter, I.S.; Nimmo, H.G.; Coggins, J.R. A Catalase from Streptomyces coelicolor A3(2). Microbiology. 1995, 141, 1377–1383. DOI: 10.1099/13500872-141-6-1377.
   PubMed Web of Science ®Google Scholar
• Wang, W.; Sun, M.; Liu, W.; Zhang, B.; Purification Characterization, o. A Psychrophilic Catalase from Antarctic Bacillus. Can. J. Microbiol. 2008, 54, 823–828. DOI: 10.1139/W08-066.
   PubMed Web of Science ®Google Scholar
• Hussein, A. A. Purification and Characterization of Thermo-alkali Stable Catalase from Bacillus sp. Int. Res. J. Biotechnol. 2012, 3, 207–214.
   Google Scholar
• Yuzugullu, Y.; Trinh, C.H.; Smith, M.A.; Pearson, R.; Phillips, S.E.V.; Sutay Kocabas, D.; Bakir, U.; Ogel, Z.B.; McPherson, M.J. Structure, Recombinant Expression and Mutagenesis Studies of the Catalase with Oxidase Activity from Scytalidium Thermophilum. Acta Crystallogr. D Biol. Crystallogr. 2013, 69, 398–408. DOI: 10.1107/S0907444912049001.
   PubMedGoogle Scholar
• Raja, S.; Murty, V.R.; Thivaharan, V.; Rajasekar, V.; Ramesh, V. Aqueous Two Phase Systems for the Recovery of Biomolecules – A Review. Scit. 2012, 1, 7–16. DOI: 10.5923/j.scit.20110101.02.
   Web of Science ®Google Scholar
• Yücekan, İ.; Önal, S. Partitioning of Invertase from Tomato in Poly(ethylene Glycol)/Sodium Sulfate Aqueous Two-Phase Systems. Process. Biochem. 2011, 46, 226–232. DOI: 10.1016/j.procbio.2010.08.015.
   Web of Science ®Google Scholar
• Raghavarao, K.S.M.S.; Rastogi, N.K.; Gowthaman, M.K.; Karanth, N.G. Aqueous Two-Phase Extraction for Downstream Processing of Enzymes/Proteins. Adv. Appl. Microbiol. 1995, 41, 97–171. DOI: 10.1016/S0065-2164(08)70309-5.
   Web of Science ®Google Scholar
• Goja, A.M.; Yang, H.; Cui, M.; Li, C. Aqueous Two-Phase Extraction Advances for Bioseparation. J. Bioproces. Biotechniq. 2013, 4, 1.
   Google Scholar
• Vaidya, B.K.; Suthar, H.K.; Kasture, S.; Nene, S. Purification of Potato Polyphenol Oxidase (PPO) by Partitioning in Aqueous Two-Phase System. Biochem. Eng. J. 2006, 28, 161–166. DOI: 10.1016/j.bej.2005.10.006.
   Web of Science ®Google Scholar
• Gautam, S.; Simon, L. Partitioning of β-Glucosidase from Trichoderma Reesei in Poly (ethylene Glycol) and Potassium Phosphate Aqueous Two-Phase Systems: Influence of pH and Temperature. Biochem. Eng. J. 2006, 30, 104–108. DOI: 10.1016/j.bej.2006.02.010.
   Web of Science ®Google Scholar
• Tubio, G.; Nerli, B.; Picó, G. Partitioning Features of Bovine Trypsin and α-Chymotrypsin in Polyethylene Glycol-sodium Citrate Aqueous Two-Phase Systems. J. Chromatogr. B. 2007, 852, 244–249. DOI: 10.1016/j.jchromb.2007.01.025.
   PubMed Web of Science ®Google Scholar
• Yuzugullu, Y.; Avcı Duman, Y. Aqueous Two Phase (PEG4000/Na2SO4) Extraction and Characterization of an Acid Invertase from Potato Tuber (Solanum tuberosum). Prep. Biochem. Biotechnol. 2015, 45, 696–711. DOI: 10.1080/10826068.2014.943373.
   PubMed Web of Science ®Google Scholar
• Kianmehr, A.; Pooraskari, M.; Mousavikoodehi, B.; Mostafavi, S. S. Recombinant D-galactose Dehydrogenase Partitioning in Aqueous Two-Phase Systems: Effect of pH and Concentration of PEG and Ammonium Sulfate. Bioresour. Bioprocess. 2014, 1, 6. DOI: 10.1186/s40643-014-0006-8.
   Google Scholar
• de Souza, R.L.; Barbosa, J.M.P.; Zanin, G.M.; Lobão, M.W.N.; Soares, C.M.F.; Lima, Á.S.S. Partitioning of Porcine Pancreatic Lipase in a Two-Phase Systems of Polyethylene Glycol/potassium Phosphate Aqueous. Appl. Biochem. Biotechnol. 2010, 161, 288–300. DOI: 10.1007/s12010-010-8907-2.
   PubMed Web of Science ®Google Scholar
• Dong, L.; Wan, J.; Cao, X. Separation of Transglutaminase Using Aqueous Two-Phase Systems Composed of Two pH-Response Polymers. J. Chromatogr. A. 2018, 1555, 106–112. DOI: 10.1016/j.chroma.2018.04.028.
   PubMed Web of Science ®Google Scholar
• Loureiro, D.B.; Braia, M.; Romanini, D.; Tubio, G. Partitioning of Xylanase from Thermomyces Lanuginosus in PEG/NaCit Aqueous Two-Phase Systems: Structural and Functional Approach. Protein Expr. Purif. 2017, 129, 25–30. DOI: 10.1016/j.pep.2016.09.003.
   PubMed Web of Science ®Google Scholar
• Kavakcıoğlu, B.; Tarhan, L. Initial Purification of Catalase from Phanerochaete chrysosporium by Partitioning in Poly (ethylene Glycol)/Salt Aqueous Two Phase Systems. Sep. Purif. Technol. 2013, 105, 8–14. DOI: 10.1016/j.seppur.2012.12.011.
   Web of Science ®Google Scholar
• Avcı Duman, Y.; Acemi, A.; Yuzugullu, Y.; Özen, F. Separation of Catalase from Amsonia Orientalis with Single Step by Aqueous Two-phase Partitioning System (ATPS), Sep. Sci. Technol. 2017, 52, 691–699. DOI: 10.1080/01496395.2016.1253588.
   Google Scholar
• Sangar, S.; Pal, M.; Moon, L.S.; Jolly, R.S. A Catalase-Peroxidase for Oxidation of β–Lactams to Their (R)-Sulfoxides. Bioresour. Technol. 2012, 115, 102–110.
   PubMed Web of Science ®Google Scholar
• Bradford, M. A Rapid and Sensitive Method for the Quantitation of Microgram Quantities of Protein Utilizing the Principle of Protein-Dye Binding. Anal. Biochem. 1976, 72, 248–254. DOI: 10.1016/0003-2697(76)90527-3.
   PubMed Web of Science ®Google Scholar
• Karkaş, T.; Önal, S. Characteristics of Invertase Partitioned in Poly(ethylene Glycol)/Magnesium Sulfate Aqueous Two-Phase System. Biochem. Eng. J. 2012, 60, 142–150. DOI: 10.1016/j.bej.2011.11.005.
   Web of Science ®Google Scholar
• Hatti-Kaul, R. Aqueous Two-Phase Systems. Methods and Protocols, Methods in Biotechnol, vol. 11; Humana Press: New Jersey, 2000.
   Google Scholar
• Laemmli, U.K. Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4. Nature. 1970, 227, 680–685. DOI: 10.1038/227680a0.
   PubMed Web of Science ®Google Scholar
• Blum, H.; Beier, H.; Gross, H.J. Improved Silver Staining of Plant Proteins, RNA and DNA in Polyacrylamide Gels. Electrophoresis. 1987, 8, 93–99. DOI: 10.1002/elps.1150080203.
   Web of Science ®Google Scholar
• Manchenko, G.P. Handbook of Detection of Enzymes on Electrophoretic Gels, 2nd ed.; CRC Press: Boca Raton, FL, USA, 2003.
   Google Scholar
• Wayne, L. G.; Diaz, G.A. A Double Staining Method for Differentiating between Two Classes of Mycobacterial Catalase in Polyacrylamide Electrophoresis Gels. Anal. Biochem. 1986, 157, 89–92. DOI: 10.1016/0003-2697(86)90200-9.
   PubMed Web of Science ®Google Scholar
• Albertson, P. A. Partition of Cell Particles and Macromolecules. 3rd ed; Wiley: New York, USA, 1986.
   Google Scholar
• Diamond, A.D.; Hsu, J.T. Aqueous Two Phase Systems for Biomolecule Separation. In Tsao G.T. (eds) Bioseparation. Advances in Biochemical Engineering/Biotechnology, vol47. Springer: Berlin, Heidelberg, 1992; pp 89–135.
   Google Scholar
• Eiteman, M.A.; Gainer, J.L. Partition of Isomeric Dipeptides in Poly(ethylene Glycol)/Magnesium Sulfate Aqueous Two-Phase Systems. Biochim. Biophys. Acta. 1991, 1073, 451–455. DOI: 10.1016/0304-4165(91)90214-2.
   PubMed Web of Science ®Google Scholar
• Johansson, G. Partition of Proteins and Microorganisms in Aqueous Biphasic Systems. Mol. Cell. Biochem. 1974, 30, 169–180. DOI: 10.1007/BF01731478.
   Google Scholar
• Yuzugullu Karakus, Y.; Acemi, A.; Işık, S.; Duman, Y. Purification of Peroxidase from Amsonia Orientalis by Three-Phase Partitioning and Its Biochemical Characterization. Sep. Sci. Technol. 2018, 53, 756–766. DOI: 10.1080/01496395.2017.1405990.
   Web of Science ®Google Scholar
• Albertsson, P.A.; Cajarville, A.; Brooks, D.E.; Tjerneld, F. Partition of Proteins in Aqueous Polymer Two-Phase Systems and the Effect of Molecular Weight of the Polymer. Biochim. Biophys. Acta. 1987, 926, 87–93. DOI: 10.1016/0304-4165(87)90185-1.
   PubMed Web of Science ®Google Scholar
• Pico, G.; Romanini, D.; Nerli, B.; Farruggia, B. Polyethyleneglycol Molecular Mass and Polydispersivity Effect on Protein Partitioning in Aqueous Two-Phase Systems. J. Chromatogr. B. 2006, 830, 286–292. DOI: 10.1016/j.jchromb.2005.11.008.
   PubMed Web of Science ®Google Scholar
• Engel, S.; Barak, Z.; Chipman, D.M.; Merchuk, J.C. Purification of Acetohydroxy Acid Synthase by Separation in an Aqueous Two-Phase System. J. Chromatogr. B. 2000, 743, 281–286. DOI: 10.1016/S0378-4347(00)00053-0.
   PubMed Web of Science ®Google Scholar
• Mohamadi, H. S.; Omidinia, E. Purification of Recombinant Phenylalanine Dehydrogenase by Partitioning in Aqueous Two-Phase Systems. J. Chromatogr. B. 2007, 854, 273–278. DOI: 10.1016/j.jchromb.2007.04.049.
   PubMed Web of Science ®Google Scholar
• Nandini, K. E.; Rastogi, N. K. Integrated Downstream Processing of Lactoperoxidase from Milk Whey Involving Aqueous Two-Phase Extraction and Ultrasound Assisted Ultrafiltration. Appl. Biochem. Biotechnol. 2011, 163, 173–185. DOI: 10.1007/s12010-010-9026-9.
   PubMed Web of Science ®Google Scholar
• Babu, B.R.; Rastogi, N.K.; Raghavarao, K.S.M.S. Liquid–Liquid Extraction of Bromelain and Polyphenol Oxidase Using Aqueous Two-Phase System. Chem. Eng. Process. 2008, 47, 83–89. DOI: 10.1016/j.cep.2007.08.006.
   Web of Science ®Google Scholar
• Chagas, R.F.; Baila, A.M.; Fernandes, K.F.; Winters, M.S.; Pereira, M.; Almeida, C.M. Purification of Paracoccidioides brasiliensis Catalase P: Subsequent Kinetic and Stability Studies. J. Biochem. 2010, 147, 345–351. DOI: 10.1093/jb/mvp182.
   PubMed Web of Science ®Google Scholar
• Nicholls, P.; Fita, I.; Loewen, P.C. Enymology and Structure of Catalases. Adv. Inorg. Chem. 2001, 51, 51–106.
   Web of Science ®Google Scholar
• Li, J.; Zhang, Y.; Chen, H.; Liu, Y.; Yang, Y. Purification and Characterization of Recombinant Bacillus subtilis 168 Catalase Using a Basic Polypeptide from Ribosomal Protein L2. Biochem. Eng. J. 2013, 72, 83–89. DOI: 10.1016/j.bej.2013.01.002.
   Web of Science ®Google Scholar
• Dong, W.; Hou, Y.; Li, S.; Wang, F.; Zhou, J.; Li, Z.; Wang, Y.; Huang, F.; Fu, L.; Huang, Y.; Cui, Z. Purification, Cloning, Expression, and Biochemical Characterization of a Monofunctional Catalase, KatP, from Pigmentiphaga sp. DL-8. Protein. Expr. Purif. 2015, 108, 54–61. DOI: 10.1016/j.pep.2015.01.011.
   PubMed Web of Science ®Google Scholar
• Sooch, B.S.; Kauldhar, B.S.; Puri, M. Recent Insights into Microbial Catalases: Isolation, Production and Purification. Biotechnol. Adv. 2014, 32, 1429–1447. DOI: 10.1016/j.biotechadv.2014.09.003.
   PubMed Web of Science ®Google Scholar
• Jia, X.; Lin, X.; Lin, C.; Lin, L.; Chen, J. Enhanced Alkaline Catalase Production by Serratia marcescens FZSF01:Enzyme Purification, Characterization, and Recombinant Expression. Electron. J. Biotechnol. 2017, 30, 110–117. DOI: 10.1016/j.ejbt.2017.10.001.
   Web of Science ®Google Scholar
• Kocabas, D.S.; Bakir, U.; Phillips, S.E.; McPherson, M.J.; Ogel, Z.B. Purification, Characterization and Identification of a Novel Bifunctional Catalase–Phenol Oxidase from Scytalidium Thermophilum. Appl. Microbiol. Biotechnol. 2008, 79, 407–415. DOI: 10.1007/s00253-008-1437-y.
   PubMed Web of Science ®Google Scholar
• Levy, E.; Eyal, Z.; Hochman, A. Purification and Characterization of a Catalase-Peroxidase from the Fungus Septoria Tritici. Arch. Biochem. Biophys. 1992, 296, 321–327. DOI: 10.1016/0003-9861(92)90579-L.
   PubMed Web of Science ®Google Scholar
• Pedrini, N.; Juárez, M. P.; Crespo, R.; de Alaniz, M. J. Clues on the Role of Beauveria bassiana Catalases in Alkane Degradation Events. Mycologia. 2006, 98, 528–534. DOI: 10.1080/15572536.2006.11832655.
   PubMed Web of Science ®Google Scholar
• Kulys, J.; Kriauciunas, K.; Vidziunaite, R. Biphasic Character of Fungal Catalases Inhibition with Hyrdroxylamine in Presence of Hydrogen Peroxide. J. Mol. Catal. B Enzym. 2003, 26, 79–85. DOI: 10.1016/S1381-1177(03)00165-6.
   Google Scholar
• Yuzugullu Karakus, Y.; Goc, G.; Balci, S.; Yorke, B.A.; Trinh, C.H.; McPherson, M.J.; Pearson, A.R. Identification of the Site of Oxidase Substrate Binding in Scytalidium Thermophilum Catalase. Acta Crystallogr. D Struct. Biol. 2018, 74, 979–985. DOI: 10.1107/S2059798318010628.
   PubMedGoogle Scholar
• Pei, J.; Wang, H.; Wu, L.; Xia, S.; Xu, C.; Zheng, B.; Li, T.; Jiang, Y. Biochemical Characterization of a Catalase from Vibrio vulnificus, A Pathogen That Causes Gastroenteritis. Acta Biochim. Pol. 2017, 64, 543–549. DOI: 10.18388/abp.2017_1530.
   PubMed Web of Science ®Google Scholar
• Loewen, P.C.; Switala, J. Of Spore Specific Catalase-2 in Bacillus Subtillis. Biochem. Cell Biol. 1988, 66, 707–714. DOI: 10.1139/o88-081.
   PubMedGoogle Scholar
• Zhang, X.Q.; Xue, Y.F.; Zhao, A.M.; Du, G.C.; Xu, Z.H.; Chen, J. Purification and Characterization of a Monofunctional Catalase from an Alkaliphilic Bacillus sp. F26. Chin. J. Biotechnol. 2005, 21, 71–77.
   Google Scholar
• Rehan, M.; Younus, H. Effect of Organic Solvents on the Conformation and Interaction of Catalase and Anticatalase Antibodies. Int. J. Biol. Macromol. 2006, 38, 289–297. DOI: 10.1016/j.ijbiomac.2006.03.023.
   PubMed Web of Science ®Google Scholar