330
Views
15
CrossRef citations to date
0
Altmetric
Articles

Assessment of crude oil degradation efficiency of newly isolated actinobacteria reveals untapped bioremediation potentials

&
Pages 133-143 | Published online: 22 Mar 2016

REFERENCES

  • Akhlaq, M. S. 1997. Polycyclic aromatic hydrocarbons in crude oil-contaminated soil: A two-step method for the isolation and characterization of PAHs. Environ. Sci. Pollut. Res. Int. 4:217–222.
  • Alvarez, V. M., J. M. Marques, E. Korenblum, and L. S. Seldin. 2011. Comparative bioremediation of crude oil-amended tropical soil microcosms by natural attenuation, bioaugmentation, or bioenrichment. Appl. Environ. Soil Sci. 2011:156320.
  • Anastasi, A., T. Coppola, V. Prigionea, and G. Varesea. 2009. Pyrene degradation and detoxification in soil by a consortium of basidiomycetes isolated from compost: Role of laccases and peroxidases. J. Hazard. Mater. 165:1229–1233.
  • Aslim, B., Z. N. Yuksekdag, and Y. Beyatli, 2002. Determination of PHB growth quantities of certain Bacillus species isolated from soil. Turk. Electron. J. Biotechnol. (Special Issue):24–32.
  • Barabas, G., G. Vargha, I. M. Szabo, S. Damjanovich, I. Szabo, Szollosi, J. Matko, A. Penyige, T. Hirano, and I. M. Szabo. 2001. n-Alkane uptake and utilization by Streptomyces strains. Antonie van Leeuwenhoek 79:269–276.
  • Bradford, M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248–254.
  • Bundy, J. G., G. I. Paton, and C. D. Campbell. 2002. Microbial communities in different soil types do not converge after diesel contamination. J. Appl. Microbiol. 92:276–288.
  • Chaillan, F., A. Le Fleche, E. Bury, Y. Phantavong, P. Grimont, A. Saliot, and J. Oudot. 2004. Identification and biodegradation potential of tropical aerobic hydrocarbon-degrading microorganisms. Res. Microbiol. 155:587–595.
  • Coulon, F., B. A. McKew, A. M. Osborn, T. J. McGenity, and K. N. Timmis. 2006. Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environ. Microbiol. 9:177–186.
  • Dandie, C. E., S. M. Thomas, R. H. Bentham, and N. C. McClure. 2004. Physiological characterization of Mycobacterium sp. strain 1B isolated from a bacterial culture able to degrade high-molecular-weight polycyclic aromatic hydrocarbons. J. Appl. Microbiol. 97:246–255.
  • Das, N., and P. Chandran. 2011. Microbial degradation of petroleum hydrocarbon contaminants: An overview. Biotechnol. Res. Int. 2011:1–13.
  • Ensley, B. D., T. D. Osslund, M. Joyce, and M .J. Simon. 1987. Expression and complementation of naphthalene dioxygenase activity in Escherichia coli. In Microbial metabolism and the carbon cycle, ed. S. R. Hagedon and D. A. Kunz, 437–455. New York: Harwood Academic Publishers.
  • Garapati, V. K., and S. Mishra. 2012. Hydrocarbon degradation using fungal isolate: Nutrients optimized by combined grey relational analysis. Int. J. Eng. Res. Appl. 2:390–393.
  • Hamamura, N., S. H. Olson, D. M. Ward, and W. P. Inskeep. 2006. Microbial population dynamics associated with crude oil biodegradation in diverse soils. Appl. Environ. Microbiol. 72:6316–6324.
  • Hunter, C. L., R. Maurus, M. R. Mauk, H. Lee, E. L. Raven, H. Tong, N. Nguyen, M. Smith, G. D. Brayer, and A. G. Mauk. 2003. Introduction and characterization of a functionally linked metal ion binding site at the exposed heme edge of myoglobin. Proc. Natl. Acad. Sci. U. S. A. 100:3647–3652.
  • Jones, D. M., I. M. Head, N. D. Gray, J. J. Adams, A. K. Rowan, C. M. Aitken, B. Bennett, H. Huang, A. Brown, B. F. J. Bowler, T. Oldenburg, M. Erdmann, and S. R. Larter. 2008. Crude oil biodegradation via methanogenesis in subsurface petroleum reservoirs. Nature 451:176–180.
  • Joo, H., P. M. Ndegwa, M. Shoda, and C. Phae. 2008. Bioremediation of oil-contaminated soil using Candida catenulate and food waste. Environ. Pollut. 156:891–896.
  • Karigar, C. S., and S. S. Rao. 2011. Role of microbial enzymes in the bioremediation of pollutants: A review. Enzyme Res. 2011:805187. doi: 10.4061/2011/805187.
  • Kloos, K., J. C. Munch, and M. Schloter. 2006. A new method for the detection of alkane monooxygenase homologous genes (alkB) in soils based on PCR-hybridization. J. Microbiol. Methods 66:486–496.
  • Larkin, N. J., L. A. Kulakov, and C. R. C. Allen. 2005. Biodegradation and Rhodococcus—Masters of catabolic versatility. Curr. Opin. Biotechnol. 16:282–290.
  • Lateef, B. S., S. O. Oluwafemi, S. A. Omokorede, and O. Genevieve. 2011. Biodegradation of Bonny Light crude oil by bacteria isolated from contaminated soil. Int. J. Agric. Biol. 13:245–250.
  • Mance Lopez M. E., M. T. Rodriguez, E. Rios-Leal, F. Esparza-Carcia, B. Chavez-Gommez, R. Rodriguez-Vazques, and J. Barrera-Cortes. 2007. Fungi and bacteria isolated from two highly polluted soils for hydrocarbon degradation. J. Acta Chim. Sloven. 54:201–209.
  • Margesin, R., D. Labbe, F. Schinner, C. W. Greer, and L. G. Whyte. 2003. Characterization of hydrocarbon degrading microbial populations in contaminated and pristine Alpine soils. Appl. Environ. Microbiol. 69:3085–3092.
  • Millioli, V. S., E. L. C. Servulo, L. G. S. Sobral, and D. D. De Carvalho. 2009. Bioremediation of crude oil-bearing soil: Evaluating the effect of Rhamnolipid addition to soil toxicity and to crude oil biodegradation efficiency. Global NEST J. 11:181–188.
  • Muthuswamy, S., R. B. Arthur, B. Sang-Ho, and Y. Sei-Eok. 2008. Biodegradation of crude oil by individual bacterial strains and a mixed bacterial consortium isolated from hydrocarbon contaminated areas. Clean 36:92–96.
  • Obayori, O. S., M. O. Ilori, S. A. Adebusoye, G. O. Oyetibo, A.E. Omotayo, and O. O. Amund. 2009. Degradation of hydrocarbons and biosurfactant production by Pseudomonas sp. strain LP1. World J. Microbiol. Biotechnol. 25:1615–1623.
  • Okoh, A. I., and M. R. Trejo-Hernandez. 2006. Remediation of petroleum hydrocarbon polluted systems: Exploiting the bioremediation strategies. Afr. J. Biotechnol. 5:2520–2525.
  • Ordinioha, B., and S. Brisibe. 2013. The human health implications of crude oil spills in the Niger delta, Nigeria: An interpretation of published studies. Niger. Med. J. 54:10–16.
  • Quatrini, P., G. Scaglione, C. De Pasquale, S. Reila, and A. M. Puglia. 2008. Isolation of Gram-positive n-alkane degraders from a hydrocarbon contaminated Mediterranean shoreline. J. Appl. Microbiol. 104:251–259.
  • Rahman, K. S. M., J. T. Rahman, P. Lakshmanaperumalsamy, and I.M. Banat. 2002. Towards efficient crude oil degradation by a mixed bacterial consortium. Bioresour. Technol. 85:257–261.
  • Sathishkumar, M., A. R. Binupriya, S-H. Baik, and S-E. Yun. 2008. Biodegradtion of crude oil by individual bacterial strains and a mixed bacterial consortium isolated isolated from hydrocarbon contaminated areas. Clean 36:92–96.
  • US Department of Energy (DOE)/Energy Information Administration (EIA). 2013. International Energy Outlook Report. DOE/EIA-0484. http://www.eia.gov/forecasts/ieo/pdf/0484(2013).pdf (accessed February 17, 2014).
  • Van Beilen J. B., and E. G. Funhoff. 2005. Expanding the alkane oxygenase toolbox; new enzymes and applications. Curr. Opin. Biotechnol. 16:308–314.
  • Van Beilen J. B., and E. G. Funhoff. 2007. Alkane hydroxylases involved in microbial alkane degradation. Appl. Microbiol. Biotechnol. 74:13–21.
  • Vidali, M. 2001. Bioremediation. An overview. Pure Appl. Chem. 73:1163–1172.
  • Whitman, W., M. Goodfellow, P. Kämpfer, H-J. Busse, M. Trujillo, W. Ludwig, K-I. Suzuki, and A. Parte (eds). 2012. The actinobacteria. In Bergey's manual of systematic bacteriology, Vol. 5, 2nd ed. New York: Springer.
  • World Wildlife Fund International Arctic Programme (IAP). 2007. Oil spill response challenges in Arctic waters, 1–32. http://wwf.panda.org/?122240/Oil-Spill-Response-Challenges-in-Arctic-Waters (accessed February 17, 2014).
  • Xu, J. 2012. Bioremediation of crude oil contaminated soil by petroleum-degrading active bacteria, Introduction to Enhanced Oil Recovery (EOR) Processes and Bioremediation of Oil-Contaminated Sites, ed. L. Romero-Zerón, 207–244. Croatia: InTech. doi: 10.5772/47979.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.