Submerged filter biofilm formation by nitrate-contaminated groundwater microbiota

References

• Brettar , I. , Sánchez-Pérez , J. M. and Trémoliéres , M. 2002 . Nitrate elimination by denitrification in hardwood forest soils of the Upper Rhine floodplain –correlation with redox potential and organic matter . Hydrobiol , 469 : 11 – 21 .
   Web of Science ®Google Scholar
• Fukada , T. , Hiscock , K. M. , Dennis , P. F. and Grischek , T. 2003 . A dual isotope approach to identify denitrification in groundwater at a river-bank infiltration site . Water. Res. , 37 : 3070 – 3078 .
   PubMed Web of Science ®Google Scholar
• Böttcher , J. , Strebel , O. , Voerkelius , S. and Schmidt , H. L. 1990 . Using isotope fractionation of nitrate-nitrogen and nitrate oxygen for evaluation of microbial denitrification in a sandy aquifer . J. Hydrol , 114 : 413 – 424 .
   Web of Science ®Google Scholar
• Moreno , B. , Gómez , M. A. , González-López , J. and Hontoria , E. 2005 . Inoculation of a submerged filter for biological denitrification of nitrate polluted groundwater: a comparative study . J. Haz. Mat , 117 : 141 – 147 .
   PubMed Web of Science ®Google Scholar
• Soares , M. I.M. 2000 . Biological Denitrification of Groundwater . Water, Air, Soil, Pollut , 123 : 183 – 193 .
   Web of Science ®Google Scholar
• de la Rua , A. , González-López , J. and Gómez , M. A. 2008 . Influence of Temperature on Inoculation and Startup of a groundwater-denitrifying submerged filter . Environ. Eng. Sci. , 25 ( 2 ) : 265 – 274 .
   Web of Science ®Google Scholar
• Payne , W. J. 1981 . Denitrification , New York : John Wiley and Sons Inc .
   Google Scholar
• Gómez , M. A. , Gálvez , J. , Hontoria , E. and González-López , J. 2003 . Influence of ethanol concentration on biofilm bacterial composition from a denitrifying submerged filter used for contaminated groundwater . J. Biosci. Bioeng , 95 : 245 – 251 .
   PubMed Web of Science ®Google Scholar
• Moreno , B. , Gómez , M. A. , Ramos , A. , González-López , J. and Hontoria , E. 2005 . Influence of inocula over start-up of a denitrifying submerged filter applied to nitrate contaminated groundwater treatment . J. Haz. Mat , 127 : 180 – 186 .
   PubMed Web of Science ®Google Scholar
• Zhang , T. C. and Bishop , P. L. 1994 . Structure, activity and composition of biofilm . Water Sci. Tech. , 29 ( 7 ) : 335 – 344 .
   Web of Science ®Google Scholar
• Lehman , R. M. , Colwell , F. S. and Bala , G. A. 2001 . Attached and Unattached microbial communities in a simulated basalt aquifer under fracture and porous flow conditions . Appl. Environ. Microbiol , 67 : 2799 – 2809 .
   PubMed Web of Science ®Google Scholar
• Iribar , A. , Sánchez-Pérez , J. M. , Lyautey , E. and Garabetian , F. 2008 . Differentiated free-living and sediment-attached bacterial community structure inside and outside denitrification hotspots in the river-groundwater interface . Hydrobiol , 598 : 109 – 121 .
   Web of Science ®Google Scholar
• Sich , H. and Van Rijn , J. 1997 . Scanning electron microscopy of biofilm formation in denitrifying, fluidised bed reactors . Water Res. , 31 : 733 – 742 .
   Web of Science ®Google Scholar
• Watanabe , K. , Teramoto , M. , Futamata , H. and Harayama , S. 1998 . Molecular detection, isolation and physiological characterisation of functionally dominant phenol-degrading bacteria in activated sludge . Appl. Environ. Microbiol , 64 : 4396 – 4402 .
   PubMed Web of Science ®Google Scholar
• Weisburg , W. G. , Barn , S. M. , Pelletier , D. A. and Lane , D. J. 1991 . 16S ribosomal DNA amplification for phylogenetic study . J. Bacteriol , 173 : 697 – 703 .
   PubMed Web of Science ®Google Scholar
• Muyzer , G. , de Waal , E. C. and Uitterlinden , A. G. 1993 . Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction amplified genes coding for 16S rRNA . Appl. Environ. Microbiol , 59 : 695 – 700 .
   PubMed Web of Science ®Google Scholar
• Vinuesa , P. , Rademaker , J. L.W. , de Bruijn , F. J. and Werner , D. 1998 . Genotypic characterization of Bradyrhizobium strains nodulating endemic woody legumes of the Canary Island by PCR-restriction fragment length polymorphism analysis of genes encoding 16S rRNA (16S rDNA) and 16S-23S rDNA intergenic spacers, repetitive extragenic palindromic PCR genomic fingerprinting, and partial 16S rDMA sequencing . Appl. Environ. Microbiol , 64 : 2096 – 2104 .
   PubMed Web of Science ®Google Scholar
• Altschul , S. F. , Madden , T. L. , Schaffer , A. A. , Zhang , J. , Zhang , Z. , Miller , W. and Dlipman , D. J. 1997 . Gapped BLAST and PSI-BLAST: a new generation of protein database search programs . Nucleic Acids Res. , 25 : 3389 – 3402 .
   PubMed Web of Science ®Google Scholar
• Mikolajków , J. 2003 . Laboratory methods of estimating the retardation factor of migrating mineral nitrogen compounds in shallow groundwater . Geol. Quart. , 47 ( 1 ) : 91 – 96 .
   Web of Science ®Google Scholar
• Austin , J. W. , Sanders , G. , Kay , W. W. and Collison , S. K. 1998 . Thin aggregative fimbriae enhance Salmonella enteritidis biofilm formation . FEMS Microbiol. Lett , 162 : 295 – 296 .
   PubMed Web of Science ®Google Scholar
• Casamayor , E. O. , Schäfer , H. , Bañeras , L. , Pedrós-Alió , C. and Muyzer , G. 2000 . Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulphurous lakes: Comparison by microscopy and denaturing gradient gel electrophoresis . Appl. Environ. Microbiol , 66 : 499 – 508 .
   PubMed Web of Science ®Google Scholar
• Pronk , M. , Goldscheider , N. and Zopfi , J. 2009 . Microbial communities in karst groundwater and their potential use for biomonitoring . Hydrogeol. J , 17 : 37 – 48 .
   Web of Science ®Google Scholar
• Brenner , D. J. , Krieg , N. R. and Staley , J. T. 2005 . Bergey's Manual of Systematic Bacteriology , 2° ed , Vol. 2 , New York : The Proteobacteria. Springer .
   Google Scholar
• Schloe , K. , Gillis , M. , Hoste , B. , Pot , B. , Vancanneyt , M. , Mergaert , J. , Swings , J. , Biedermann , J. and Sussmuth , R. 2000 . Polyphasic characterization of poly-3-hydroxybutyrate-co-3-hydroxyvalerate (P(HB-co-HV)) metabolizing and denitrifying Acidovorax sp. straits . Syst. Appl. Microbiol , 23 : 364 – 372 .
   PubMed Web of Science ®Google Scholar
• Thierry , S. , Mcarie , H. , Lizaka , T. , Geiβdörfer , W. , Assih , E. A. , Spanevello , M. , Verhe , F. , Thomas , P. , Fudou , R. , Monroy , O. , Labat , M. and Ouattara , A. S. 2004 . Peudoxanthomonas mexicana sp. nov. and Pseudoxanthomonas japonensis sp. nov. isolated from diverse environments, and emended descriptions of the genus Pseudoxanthomanas Finkmann et al 2000 and of its type species . Int. J. Syst. Evol. Microbiol , 54 : 2245 – 2255 .
   PubMed Web of Science ®Google Scholar