References
- Kim , T. G. and Knudsen , G. R. 2008 . Quantitative real-time PCR effectively detects and quantifies colonization of sclerotia of Sclerotinia sclerotiorum by Trichoderma spp . Appl. Soil Ecol. , 40 ( 1 ) : 100 – 108 .
- Dionisi , H. M. , Harms , G. , Layton , A. C. , Gregory , I. R. , Parker , J. , Hawkins , S. A. , Robinson , K. G. and Sayler , G. S. 2003 . Power analysis for real-time PCR quantification of genes in activated sludge and analysis of the variability itroduced by DNA extraction . Appl. Environ. Microbiol , 69 ( 11 ) : 6597 – 6604 .
- Higuchi , R. , Fockler , C. , Dollinger , G. and Watson , R. 1993 . Kinetic PCR analysis: Real-time monitoring of DNA amplification reactions . Nat. Biotechnol , 11 ( 9 ) : 1026 – 1030 .
- Steinberg , L. M. and Regan , J. M. 2009 . mcrA-targeted real-time quantitative PCR method to examine methanogen communities . Appl. Environ. Microbiol. , 75 ( 13 ) : 4435 – 4442 .
- Jones , W. J. , Nagle , D. P.J. and Whitman , W. B. 1987 . Methanogens and the diversity of archaebacteria . Microbial Rev , 51 : 135 – 177 .
- Cakir , F. Y. and Stenstrom , M. K. 2005 . Greenhouse gas production: A comparison between aerobic and anaerobic wastewater treatment technology . Water Res , 39 ( 17 ) : 4197 – 4203 .
- Demirel , B. and Scherer , P. 2008 . The roles of acetotrophic and hydrogenotrophic methanogens during anaerobic conversion of biomass to methane: A review . Rev. Environ. Sci. Biotechnol , 7 ( 2 ) : 173 – 190 .
- Rittmann , B. E. 2006 . Microbial ecology to manage processes in environmental biotechnology . Trends Biotechnol , 24 ( 6 ) : 261 – 266 .
- Hedrick , D. B. , Richards , B. , Jewell , W. , Guckert , J. B. and White , D. C. 1991 . Disturbance, starvation, and overfeeding stresses detected by microbial lipid biomarkers in high-solids high-yield methanogenic reactors . J. Ind. Microbiol. Biotechnol. , 8 ( 2 ) : 91 – 98 .
- Luton , P. E. , Wayne , J. M. , Sharp , R. J. and Riley , P. W. 2002 . The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in landfill . Microbiology , 148 ( 11 ) : 3521 – 3530 .
- Markham , N. R. and Zuker , M. 2005 . DINAMelt web server for nucleic acid melting prediction . Nucl. Acids Res , 33 ( 2 ) : W577 – W581 .
- Ramakers , C. , Ruijter , J. M. , Deprez , R. H.L. and Moorman , A. F.M. 2003 . Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data . Neurosci. Lett , 339 ( 1 ) : 62 – 66 .