The trend of enteropathogenic Escherichia coli towards atypical multidrug resistant genotypes

References

• Najibi S, Bakhshi B, Fallahzad S, Pourshafie MR, Katouli M, Sattari M, et al. Distribution of class 1 integrons among enteropathogenic Escherichia coli. Can J Microbiol. 2012 May;58(5):637–43.10.1139/w2012-035
   PubMed Web of Science ®Google Scholar
• Alikhani MY, Mirsalehian A, Fatollahzadeh B, Pourshafie MR, Aslani MM. Prevalence of enteropathogenic and shiga toxin-producing Escherichia coli among children with and without diarrhoea in Iran. J Health Popul Nutr. 2007 Mar;25(1):88–93.
   PubMed Web of Science ®Google Scholar
• Jafari F, Garcia-Gil LJ, Salmanzadeh-Ahrabi S, Shokrzadeh L, Aslani MM, Pourhoseingholi MA, et al. Diagnosis and prevalence of enteropathogenic bacteria in children less than 5 years of age with acute diarrhea in Tehran children’s hospitals. J Infect. 2009 Jan;58(1):21–7.10.1016/j.jinf.2008.10.013
   PubMed Web of Science ®Google Scholar
• Dallal MM, Khorramizadeh MR, MoezArdalan K. Occurrence of enteropathogenic bacteria in children under 5 years with diarrhoea in south Tehran. East Mediterr Health J. 2006 Nov;12(6):792–7.
   PubMedGoogle Scholar
• Moon HW, Whipp SC, Argenzio RA, Levine MM, Giannella RA. Attaching and effacing activities of rabbit and human enteropathogenic Escherichia coli in pig and rabbit intestines. Infect Immun. 1983 Sep;41(3):1340–51.
   PubMed Web of Science ®Google Scholar
• Nataro JP, Kaper JB. Diarrheagenic Escherichia coli. Clin Microbiol Rev. 1998 Jan;11(1):142–201.
   PubMed Web of Science ®Google Scholar
• Leverstein-van Hall MA, Box AT, Blok HE, Paauw A, Fluit AC, Verhoef J. Evidence of extensive interspecies transfer of integron‐mediated antimicrobial resistance genes among multidrug‐resistant enterobacteriaceae in a clinical setting. J Infect Dis. 2002 Jul 1;186(1):49–56.10.1086/jid.2002.186.issue-1
   PubMed Web of Science ®Google Scholar
• Hussein AI, Ahmed AM, Sato M, Shimamoto T. Characterization of integrons and antimicrobial resistance genes in clinical isolates of Gram-negative bacteria from Palestinian hospitals. Microbiol Immunol. 2009 Nov;53(11):595–602.10.1111/mim.2009.53.issue-11
   PubMed Web of Science ®Google Scholar
• Nelson ML, Park BH, Andrews JS, Georgian VA, Thomas RC, Levy SB. Inhibition of the tetracycline efflux antiport protein by 13-thio-substituted 5-hydroxy-6-deoxytetracyclines. J Med Chem. 1993 Feb 5;36(3):370–7.10.1021/jm00055a008
   PubMed Web of Science ®Google Scholar
• Nelson ML, Levy SB. Reversal of tetracycline resistance mediated by different bacterial tetracycline resistance determinants by an inhibitor of the Tet(B) antiport protein. Antimicrob Agents Chemother. 1999 Jul;43(7):1719–24.
   PubMed Web of Science ®Google Scholar
• Chopra I, Roberts M. Tetracycline antibiotics: mode of action, applications, molecular biology, and epidemiology of bacterial resistance. Microbiol Mol Biol Rev. 2001 Jun;65(2):232–60; second page, table of contents.10.1128/MMBR.65.2.232-260.2001
   PubMed Web of Science ®Google Scholar
• Koo HJ, Woo GJ. Distribution and transferability of tetracycline resistance determinants in Escherichia coli isolated from meat and meat products. Int J Food Microbiol. 2011 Feb 28;145(2–3):407–13.10.1016/j.ijfoodmicro.2011.01.003
   PubMed Web of Science ®Google Scholar
• Roberts MC. Tetracycline resistance determinants: mechanisms of action, regulation of expression, genetic mobility, and distribution. FEMS Microbiol Rev. 1996 Oct;19(1):1–24.10.1111/j.1574-6976.1996.tb00251.x
   PubMed Web of Science ®Google Scholar
• CLSI. Performance standards for antimicrobial disk susceptibility testing; twenty-second informational supplement. m100–s122 (Vol. 32, No. 3). Wayne, PA: Clinical and Laboratory Standards Institute; 2012.
   Google Scholar
• CLSI. Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically; approved standard. 7th ed. M7–A7 (Vol. 26, No. 2) . Wayne, PA: Clinical and Laboratory Standards Institute; 2006.
   Google Scholar
• Ribot EM, Fair M, Gautom R, Cameron D, Hunter S, Swaminathan B, et al. Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157: H7, Salmonella, and Shigella for PulseNet. Foodborne Pathog Dis. 2006;3(1):59–67.
   PubMed Web of Science ®Google Scholar
• Magiorakos AP, Srinivasan A, Carey R, Carmeli Y, Falagas M, Giske C, et al. Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance. Clin Microbiol Infect. 2012;18(3):268–81.10.1111/j.1469-0691.2011.03570.x
   PubMed Web of Science ®Google Scholar
• Kam KM, Luey CK, Tsang YM, Law CP, Chu MY, Cheung TL, et al. Molecular subtyping of Vibrio cholerae O1 and O139 by pulsed-field gel electrophoresis in Hong Kong: correlation with epidemiological events from 1994 to 2002. J Clin Microbiol. 2003 Oct;41(10):4502–11.10.1128/JCM.41.10.4502-4511.2003
   PubMed Web of Science ®Google Scholar
• Alikhani MY, Mirsalehian A, Aslani MM. Detection of typical and atypical enteropathogenic Escherichia coli (EPEC) in Iranian children with and without diarrhoea. J Med Microbiol. 2006 Sep;55(Pt 9):1159–63.10.1099/jmm.0.46539-0
   PubMed Web of Science ®Google Scholar
• Santona S, Diaz N, Fiori PL, Francisco M, Sidat M, Cappuccinelli P, et al. Genotypic and phenotypic features of enteropathogenic Escherichia coli isolated in industrialized and developing countries. J Infect Dev Countries. 2013 Mar;7(3):214–9.
   PubMed Web of Science ®Google Scholar
• Ochoa TJ, Barletta F, Contreras C, Mercado E. New insights into the epidemiology of enteropathogenic Escherichia coli infection. Trans R Soc Trop Med Hyg. 2008 Sep;102(9):852–6.10.1016/j.trstmh.2008.03.017
   PubMed Web of Science ®Google Scholar
• Vernacchio L, Vezina RM, Mitchell AA, Lesko SM, Plaut AG, Acheson DW. Diarrhea in American infants and young children in the community setting. Pediatr Infect Dis J. 2006 Jan;25(1):2–7.10.1097/01.inf.0000195623.57945.87
   PubMed Web of Science ®Google Scholar
• Bakhshi B, Fallahzad S, Pourshafie MR. The occurrence of atypical enteropathogenic Escherichia coli strains among children with diarrhea in Iran. J Infect Chemother. 2013 Aug;19(4):615–20.10.1007/s10156-012-0526-0
   PubMed Web of Science ®Google Scholar
• Nguyen TV, Le Van P, Le Huy C, Gia KN, Weintraub A. Detection and characterization of diarrheagenic Escherichia coli from young children in Hanoi, Vietnam. Vietnam. J Clin Microbiol. 2005 Feb;43(2):755–60.10.1128/JCM.43.2.755-760.2005
   PubMed Web of Science ®Google Scholar
• Sarantuya J, Nishi J, Wakimoto N, Erdene S, Nataro JP, Sheikh J, et al. Typical enteroaggregative Escherichia coli is the most prevalent pathotype among E. coli strains causing diarrhea in Mongolian children. J Clin Microbiol. 2004 Jan;42(1):133–9.10.1128/JCM.42.1.133-139.2004
   PubMed Web of Science ®Google Scholar
• Al-Gallas N, Bahri O, Bouratbeen A, Ben Haasen A, Ben Aissa R. Etiology of acute diarrhea in children and adults in Tunis, Tunisia, with emphasis on diarrheagenic Escherichia coli: prevalence, phenotyping, and molecular epidemiology. Am J Trop Med Hyg. 2007 Sep;77(3):571–82.
   PubMed Web of Science ®Google Scholar
• Ratchtrachenchai OA, Subpasu S, Hayashi H, Ba-Thein W. Prevalence of childhood diarrhoea-associated Escherichia coli in Thailand. J Med Microbiol. 2004 Mar;53(Pt 3):237–43.10.1099/jmm.0.05413-0
   PubMed Web of Science ®Google Scholar
• Knutton S, Shaw R, Phillips AD, Smith HR, Willshaw GA, Watson P, et al. Phenotypic and genetic analysis of diarrhea-associated Escherichia coli isolated from children in the United Kingdom. J Pediatr Gastroenterol Nutr. 2001 Jul;33(1):32–40.10.1097/00005176-200107000-00006
   PubMed Web of Science ®Google Scholar
• Araujo JM, Tabarelli GF, Aranda KR, Fabbricotti SH, Fagundes-Neto U, Mendes CM, et al. Typical enteroaggregative and atypical enteropathogenic types of Escherichia coli are the most prevalent diarrhea-associated pathotypes among Brazilian children. J Clin Microbiol. 2007 Oct;45(10):3396–9.10.1128/JCM.00084-07
   PubMed Web of Science ®Google Scholar
• Afset JE, Bergh K, Bevanger L. High prevalence of atypical enteropathogenic Escherichia coli (EPEC) in Norwegian children with diarrhoea. J Med Microbiol. 2003 Nov;52(Pt 11):1015–9.10.1099/jmm.0.05287-0
   PubMed Web of Science ®Google Scholar
• Alikhani MY, Hashemi SH, Aslani MM, Farajnia S. Prevalence and antibiotic resistance patterns of diarrheagenic Escherichia coli isolated from adolescents and adults in Hamedan, Western Iran. Iran J microbiol. 2013;5(1):42–47.
   PubMedGoogle Scholar
• Aslani MM, Alikhani MY, Zavari A, Yousefi R, Zamani AR. Characterization of enteroaggregative Escherichia coli (EAEC) clinical isolates and their antibiotic resistance pattern. Int J Infect Dis. 2011;15(2):e136–e139.10.1016/j.ijid.2010.10.002
   PubMed Web of Science ®Google Scholar
• Oberhelman RA, Laborde D, Mera R, Starszak E, Saunders P, Mirza A, et al. Colonization with enteroadherent, enterotoxigenic and enterohemorrhagic Escherichia coli among day-care center attendees in New Orleans.Louisiana. Pediatr Infect Dis J. 1998;17(12):1159–62.10.1097/00006454-199812000-00012
   PubMed Web of Science ®Google Scholar
• Raju B, Ballal M. Multidrug resistant enteroaggregative Escherichia coli diarrhoea in rural southern Indian population. Scand J Infect Dis. 2009;41(2):105–8.10.1080/00365540802641856
   PubMed Web of Science ®Google Scholar
• Chigor VN, Umoh VJ, Smith SI, Igbinosa EO, Okoh AI. Multidrug resistance and plasmid patterns of Escherichia coli O157 and other E. coli isolated from diarrhoeal stools and surface waters from some selected sources in Zaria, Nigeria. Int J Environ Res Public Health. 2010;7(10):3831–41.10.3390/ijerph7103831
   PubMed Web of Science ®Google Scholar
• Eftekhari N, Bakhshi B, Pourshafie MR, Zarbakhsh B, Rahbar M, Hajia M, et al. Genetic diversity of Shigella spp. and their integron content. Foodborne Pathog Dis. 2013 Mar;10(3):237–42.10.1089/fpd.2012.1250
   PubMed Web of Science ®Google Scholar
• Lee C, Langlois BE, Dawson KA. Detection of tetracycline resistance determinants in pig isolates from three herds with different histories of antimicrobial agent exposure. Appl Environ Microbiol. 1993 May;59(5):1467–72.
   PubMed Web of Science ®Google Scholar
• Blake DP, Humphry RW, Scott KP, Hillman K, Fenlon DR, Low JC. Influence of tetracycline exposure on tetracycline resistance and the carriage of tetracycline resistance genes within commensal Escherichia coli populations. J Appl Microbiol. 2003;94(6):1087–97.10.1046/j.1365-2672.2003.01937.x
   PubMed Web of Science ®Google Scholar
• Schwaiger K, Holzel C, Bauer J. Resistance gene patterns of tetracycline resistant Escherichia coli of human and porcine origin. Vet Microbiol. 2010 May 19;142(3–4):329–36.10.1016/j.vetmic.2009.09.066
   PubMed Web of Science ®Google Scholar
• Michalova E, Novotna P, Schlegelova J. Tetracyclines in veterinary medicine and bacterial resistance to them. A review. Vet Med. 2004;3:79–100.
   Google Scholar
• Schmidt H, Knop C, Franke S, Aleksic S, Heesemann J, Karch H. Development of PCR for screening of enteroaggregative Escherichia coli. J Clin Microbiol. 1995 Mar;33(3):701–5.
   PubMed Web of Science ®Google Scholar
• Le Bouguenec C, Archambaud M, Labigne A. Rapid and specific detection of the pap, afa, and sfa adhesin-encoding operons in uropathogenic Escherichia coli strains by polymerase chain reaction. J Clin Microbiol. 1992 May;30(5):1189–93.
   PubMed Web of Science ®Google Scholar
• Le Bouguenec C, Lalioui L, du Merle L, Jouve M, Courcoux P, Bouzari S, et al. Characterization of AfaE adhesins produced by extraintestinal and intestinal human Escherichia coli isolates: PCR assays for detection of Afa adhesins that do or do not recognize Dr. blood group antigens. J Clin Microbiol. 2001 May;39(5):1738–45.10.1128/JCM.39.5.1738-1745.2001
   PubMed Web of Science ®Google Scholar
• Adabi M, Bakhshi B, Goudarzi H, Zahraei SM, Pourshafie MR. Distribution of class I integron and sulfamethoxazole trimethoprim constin in Vibrio cholerae isolated from patients in Iran. Microb Drug Resist. 2009 Sep;15(3):179–84.10.1089/mdr.2009.0885
   PubMed Web of Science ®Google Scholar
• Collis CM, Hall RM. Gene cassettes from the insert region of integrons are excised as covalently closed circles. Mol Microbiol. 1992 Oct;6(19):2875–85.10.1111/mmi.1992.6.issue-19
   PubMed Web of Science ®Google Scholar
• White PA, McIver CJ, Rawlinson WD. Integrons and gene cassettes in the enterobacteriaceae. Antimicrob Agents Chemother. 2001 Sep;45(9):2658–61.10.1128/AAC.45.9.2658-2661.2001
   PubMed Web of Science ®Google Scholar
• Gunzburg ST, Tornieporth NG, Riley LW. Identification of enteropathogenic Escherichia coli by PCR-based detection of the bundle-forming pilus gene. J Clin Microbiol. 1995 May;33(5):1375–7.
   PubMed Web of Science ®Google Scholar
• Lacher DW, Steinsland H, Blank TE, Donnenberg MS, Whittam TS. Molecular evolution of typical enteropathogenic Escherichia coli: clonal analysis by multilocus sequence typing and virulence gene allelic profiling. J Bacteriol. 2007 Jan;189(2):342–50.10.1128/JB.01472-06
   PubMed Web of Science ®Google Scholar
• Waters SH, Rogowsky P, Grinsted J, Altenbuchner J, Schmitt R. The tetracycline resistance determinants of RP1 and Tn1721: nucleotide sequence analysis. Nucleic Acids Res. 1983 Sep 10;11(17):6089–105.10.1093/nar/11.17.6089
   PubMed Web of Science ®Google Scholar
• Ng LK, Mulvey MR, Martin I, Peters GA, Johnson W. Genetic characterization of antimicrobial resistance in Canadian isolates of Salmonella serovar Typhimurium DT104. Antimicrob Agents Chemother. 1999 Dec;43(12):3018–21.
   PubMed Web of Science ®Google Scholar