DNA methylation and cerebellar development, the regulation of Notch and Shh pathway

References

• Aguirre A, Rubio ME, Gallo V 2010. Notch and EGFR pathway interaction regulates neural stem cell number and self-renewal. Nature 467:323–327. DOI:10.1038/nature09347.
   PubMed Web of Science ®Google Scholar
• Berger SL 2007. The complex language of chromatin regulation during transcription. Nature 447:407–412. DOI:10.1038/nature05915.
   PubMed Web of Science ®Google Scholar
• Bird A 2002. DNA methylation patterns and epigenetic memory. Genes & Development 16:6–21. DOI:10.1101/gad.947102.
   PubMed Web of Science ®Google Scholar
• Bird AP 1986. CpG-rich islands and the function of DNA methylation. Nature 321:209–213. DOI:10.1038/321209a0.
   PubMed Web of Science ®Google Scholar
• Bolós V, Grego-Bessa J, De La Pompa JL 2007. Notch signaling in development and cancer. Endocrine Reviews 28:339–363. DOI:10.1210/er.2006-0046.
   PubMed Web of Science ®Google Scholar
• Bosma MM 2010. Timing and mechanism of a window of spontaneous activity in embryonic mouse hindbrain development. Neurons and Networks in the Spinal Cord 1198:182–191.
   Web of Science ®Google Scholar
• Carletti B, Rossi F 2008. Neurogenesis in the cerebellum. The Neuroscientist 14:91–100. DOI:10.1177/1073858407304629.
   PubMed Web of Science ®Google Scholar
• Dahmane N, Ruiz i Altaba A 1999. Sonic hedgehog regulates the growth and patterning of the cerebellum. Development 126:3089–3100.
   PubMed Web of Science ®Google Scholar
• De Luca A, Parmigiani E, Tosatto G, Martire S, Hoshino M, Buffo A, Leto K, Rossi F 2015. Exogenous Sonic hedgehog modulates the pool of GABAergic interneurons during cerebellar development. Cerebellum 14:72–85. DOI:10.1007/s12311-014-0596-x.
   PubMed Web of Science ®Google Scholar
• Fleming JT, He W, Hao C, Ketova T, Pan FC, Wright CV, Litingtung Y, Chiang C 2013. The Purkinje neuron acts as a central regulator of spatially and functionally distinct cerebellar precursors. Developmental Cell 27:278–292. DOI:10.1016/j.devcel.2013.10.008.
   PubMed Web of Science ®Google Scholar
• Hatten ME, Roussel MF 2011. Development and cancer of the cerebellum. Trends in Neurosciences 34:134–142. DOI:10.1016/j.tins.2011.01.002.
   PubMed Web of Science ®Google Scholar
• Hitoshi S, Ishino Y, Kumar A, Jasmine S, Tanaka KF, Kondo T, Kato S, Hosoya T, Hotta Y, Ikenaka K 2011. Mammalian Gcm genes induce Hes5 expression by active DNA demethylation and induce neural stem cells. Nature Neuroscience 14:957–964. DOI:10.1038/nn.2875.
   PubMed Web of Science ®Google Scholar
• Hoshino M 2012. Neuronal subtype specification in the cerebellum and dorsal hindbrain. Development, Growth & Differentiation 54:317–326. DOI:10.1111/j.1440-169X.2012.01330.x.
   PubMed Web of Science ®Google Scholar
• Hu N, Strobl-Mazzulla P, Sauka-Spengler T, Me B 2012. DNA methyltransferase3A as a molecular switch mediating the neural tube-to-neural crest fate transition. Genes & Development 26:2380–2385. DOI:10.1101/gad.198747.112.
   PubMed Web of Science ®Google Scholar
• Huang CCJ, Miyagawa S, Matsumaru D, Parker KL, Yao HHC 2010. Progenitor cell expansion and organ size of mouse adrenal is regulated by Sonic hedgehog. Endocrinology 151:1119–1128. DOI:10.1210/en.2009-0814.
   PubMed Web of Science ®Google Scholar
• Iso T, Kedes L, Hamamori Y 2003. HES and HERP families: Multiple effectors of the Notch signaling pathway. Journal of Cellular Physiology 194:237–255. DOI:10.1002/(ISSN)1097-4652.
   PubMed Web of Science ®Google Scholar
• Kageyama R, Ohtsuka T, Kobayashi T 2007. The Hes gene family: Repressors and oscillators that orchestrate embryogenesis. Development 134:1243–1251. DOI:10.1242/dev.000786.
   PubMed Web of Science ®Google Scholar
• Klein AL, Zilian O, Suter U, Taylor V 2004. Murine numb regulates granule cell maturation in the cerebellum. Developmental Biology 266:161–177. DOI:10.1016/j.ydbio.2003.10.017.
   PubMed Web of Science ®Google Scholar
• Lütolf S, Radtke F, Aguet M, Suter U, Taylor V 2002. Notch1 is required for neuronal and glial differentiation in the cerebellum. Development 129:373–385.
   PubMed Web of Science ®Google Scholar
• Manoharan A, Du Roure C, Rolink AG, Burger L, Matthias P 2015. The de novo DNA Methyltransferases Dnmt3a and Dnmt3b regulate the onset of Igkappa light chain rearrangement during early B-cell development. European Journal of Immunology 45:2343–2355. DOI:10.1002/eji.201445035.
   PubMed Web of Science ®Google Scholar
• Martelli G, Zaccagnino N, Milella L, Greco I 2009. Characterization of the DNA methylation activity by gene expression analysis in Fragaria vesca. VI International Strawberry Symposium 842:569–572.
   Google Scholar
• Mecklenburg N, Martinez-Lopez JE, Moreno-Bravo JA, Perez-Balaguer A, Puelles E, Martinez S 2014. Growth and differentiation factor 10 (Gdf10) is involved in Bergmann glial cell development under Shh regulation. Glia 62:1713–1723. DOI:10.1002/glia.v62.10.
   PubMed Web of Science ®Google Scholar
• Nam Y, Weng AP, Aster JC, Blacklow SC 2003. Structural requirements for assembly of the CSL.intracellular Notch1.Mastermind-like 1 transcriptional activation complex. Journal of Biological Chemistry 278:21232–21239. DOI:10.1074/jbc.M301567200.
   PubMed Web of Science ®Google Scholar
• Numata S, Ye T, Hyde TM, Guitart-Navarro X, Tao R, Wininger M, Colantuoni C, Weinberger DR, Kleinman JE, Lipska BK 2012. DNA methylation signatures in development and aging of the human prefrontal cortex. The American Journal of Human Genetics 90:260–272. DOI:10.1016/j.ajhg.2011.12.020.
   PubMed Web of Science ®Google Scholar
• Palacios D, Puri PL 2006. The epigenetic network regulating muscle development and regeneration. Journal of Cellular Physiology 207:1–11. DOI:10.1002/(ISSN)1097-4652.
   PubMed Web of Science ®Google Scholar
• Palma V, Lim DA, Dahmane N, Sanchez P, Brionne TC, Herzberg CD, Gitton Y, Carleton A, Alvarez-Builla A, Ruiz i Altaba A 2005. Sonic hedgehog controls stem cell behavior in the postnatal and adult brain. Development 132:335–344. DOI:10.1242/dev.01567.
   PubMed Web of Science ®Google Scholar
• Patten BA, Peyrin JM, Weinmaster G, Corfas G 2003. Sequential signaling through Notch1 and erbB receptors mediates radial glia differentiation. Journal of Neuroscience 23:6132–6140.
   PubMed Web of Science ®Google Scholar
• Qin W, Wolf P, Liu N, Link S, Smets M, Mastra FL, Forné I, Pichler G, Hörl D, Fellinger K, Spada F, Bonapace IM, Imhof A, Harz H, Leonhardt H 2015. DNA methylation requires a DNMT1 ubiquitin interacting motif (UIM) and histone ubiquitination. Cell Research 25:911–929. DOI:10.1038/cr.2015.72.
   PubMed Web of Science ®Google Scholar
• Razin A, Webb C, Szyf M 1984. Variations in DNA methylation during mouse cell differentiation in vivo and in vitro. Proceedings of the National Academy of Sciences of the United States of America 81:2275–2279. DOI:10.1073/pnas.81.8.2275.
   PubMed Web of Science ®Google Scholar
• Stancheva I, Meehan RR 2000. Transient depletion of xDnmt1 leads to premature gene activation in Xenopus embryos. Genes & Development 14:313–327.
   PubMed Web of Science ®Google Scholar
• Sun W, Zang L, Shu Q, Li X 2014. From development to diseases: The role of 5hmC in brain. Genomics 104:347–351. DOI:10.1016/j.ygeno.2014.08.021.
   PubMed Web of Science ®Google Scholar
• Tetsuji M, Nakashima K 2010. Oxygen tension can control the DNA methylation status of GFAP promoter through Notch signaling and allows propagation and maturation of neuronal progenitor. Neuroscience Research 68:E352–E352. DOI:10.1016/j.neures.2010.07.1559.
   Web of Science ®Google Scholar
• Wallace VA 1999. Purkinje-cell-derived Sonic hedgehog regulates granule neuron precursor cell proliferation in the developing mouse cerebellum. Current Biology 9:445–448. DOI:10.1016/S0960-9822(99)80195-X.
   PubMed Web of Science ®Google Scholar
• Yakushiji N, Suzuki M, Satoh A, Sagai T, Shiroishi T, Kobayashi H, Sasaki H, Ide H, Tamura K 2007. Correlation between Shh expression and DNA methylation status of the limb-specific Shh enhancer region during limb regeneration in amphibians. Developmental Biology 312:171–182. DOI:10.1016/j.ydbio.2007.09.022.
   PubMed Web of Science ®Google Scholar
• Yamamoto S, Charng WL, Rana NA, Kakuda S, Jaiswal M, Bayat V, Bellen HJ 2012. A mutation in EGF repeat-8 of Notch discriminates between Serrate/Jagged and Delta family ligands. Science 338:1229–1232. DOI:10.1126/science.1228745.
   PubMed Web of Science ®Google Scholar
• Zhang Y, Niu B, Yu D, Cheng X, Liu B, Deng J 2010. Radial glial cells and the lamination of the cerebellar cortex. Brain Structure & Function 215:115–122. DOI:10.1007/s00429-010-0278-5.
   PubMed Web of Science ®Google Scholar