Ex situ conservation and exploitation of fungi in Italy

References

• Anastasi , A , Coppola , T , Prigione , V and Varese , G C. 2009 . Pyrene degradation and detoxification in soil by a consortium of basidiomycetes isolated from compost: Role of laccases and peroxidases . J Hazard Mater , 165 : 1229 – 1233 .
   PubMed Web of Science ®Google Scholar
• Anastasi , A , Spina , F , Prigione , V , Tigini , V , Giansanti , P and Varese , G C. 2010 . Scale-up of a bioprocess for textile wastewater treatment using Bjerkandera adusta. . Bioresource Technol , 101 : 3067 – 3075 .
   PubMed Web of Science ®Google Scholar
• Anastasi , A , Varese , G C , Bosco , F , Chimirri , F and Filippello Marchisio , V. 2008 . Bioremediation potential of basidiomycetes isolated from compost . Bioresource Technol , 99 : 6626 – 6630 .
   PubMed Web of Science ®Google Scholar
• Barbieri , E , Gioacchini , A M , Zambonelli , A , Bertini , L and Stocchi , V. 2005 . Determination of microbial VOCs from Staphylococcus pasteuri against Tuber borchii using SPME and gas chromatography/ion trap mass spectrometry . Rapid Commun Mass Sp , 19 : 3411 – 3415 .
   PubMed Web of Science ®Google Scholar
• Blanquez , P , Sarrà , A and Vicent , T. 2008 . Development of a continuous process to adapt the textile wastewater treatment by fungi to industrial conditions . Process Biochem , 43 : 1 – 7 .
   Web of Science ®Google Scholar
• Bochers , A T , Krishnamurthy , A , Keen , C L , Meyers , F J and Gershwin , M E. 2008 . The immunobiology of mushrooms . Exp Biol Med , 233 : 259 – 276 .
   Web of Science ®Google Scholar
• Buzzini , P and Vaughan , A . 2006 . Yeast handbook. Biodiversity and ecophysiology of yeasts , Edited by: Rosa , C A and Gabor , P . 533 – 559 . Berlin : Springer-Verlag .
   Google Scholar
• Capotorti , G , Digianvincenzo , P , Cesti , P , Bernardi , A and Guglielmetti , G. 2004 . Pyrene and benzo(a)pyrene metabolism by an Aspergillus terreus strain isolated from a polycyclic aromatic hydrocarbons polluted soil . Biodegradation , 15 : 79 – 85 .
   PubMed Web of Science ®Google Scholar
• Chang , S T . 1996 . “ Mushroom research and development – equality and mutual benefit. ” . In In: Royse DJ, editor. Proceedings of the 2nd International Conference on Mushroom Biology and Mushroom Products. University Park, Pennsylvania State University, 1–10
   Google Scholar
• Chang , S T and Miles , P G . 2004 . Mushrooms cultivation, nutritional value, medicinal effect, and environmental impact. , 2nd ed , 451 Boca Raton , FL : CRC Press .
   Google Scholar
• Courtecuisse , R . 2001 . “ Current trends and perspectives for the global conservation of fungi ” . In Fungal conservation. Issue and solutions , Edited by: Moore , D , Nauta , M M , Evans , S E and Rotheroe , M . 7 – 18 . Cambridge , , UK : Cambridge University Press .
   Google Scholar
• Covino , S , Svobodová , K , Křesinová , Z , Petruccioli , M , Federici , F , D'Annibale , A and et , al. 2010 . In vivo and in vitro polycyclic aromatic hydrocarbons degradation by Lentinus (Panus) tigrinus CBS 577.79 . Bioresource Technol , 101 : 3004 – 3012 .
   PubMed Web of Science ®Google Scholar
• Donnini D, Baciarelli Falini L, Bencivenga M, Di Massimo G, editors. 2010. Atti 3° Congresso Internazionale di Spoleto sul Tartufo. Comunità Montana Monti Martani Serano e Subasio, Spoleto, book & dvd, ISBN 9788890512209, p. 866
   Google Scholar
• Donnini , D , Baciarelli Falini , L , Di Massimo , G , Benucci , G and Bencivenga , M. 2008 . Competizione o sinergia di funghi ectomicorrizici in tartufaie coltivate . Micol Ital , 37 : 46 – 51 .
   Google Scholar
• European Communities Commission (ECC) . 2006 . “ Strategia tematica per la protezione del suolo ” . In COM 232 , Bruxelles : European Communities Commission .
   Google Scholar
• Federici , E , Giubilei , M A , Cajthaml , T , Petruccioli , M and D'Annibale , A. 2011 . Lentinus (Panus) tigrinus augmentation of a hystorically contaminated soil: Matrix decontamination and structure and function of the resident bacterial community . J Hazard Mater , 186 : 1263 – 1270 .
   PubMed Web of Science ®Google Scholar
• Finale , F , Ghisalberti , E L , Sivasithamparam , K , Marra , R , Scala , F , Ruocco , M and et , al. 2009 . Factors affecting the production of Trichoderma harzianum secondary metabolites during the interaction with different plant pathogens . Lett Appl Microbiol , 48 : 705 – 711 .
   PubMed Web of Science ®Google Scholar
• Forzato , C , Furlan , G , Nitti , P , Pitocco , G , Valentin , E , Zangrando , E and et , al. 2008 . Chemo-enzymatic and yeast-catalyzed synthesis of diasteroisomeric gamma-phenil and gamma-n-pyridyl paraconates . Tetrahedron-Asymmetry , 19 : 2026 – 2036 .
   Web of Science ®Google Scholar
• Gadd , M G. 2009 . Biosorption: Critical review of scientific rationale, environmental importance and significance for pollution treatment . J Chem Technol Biot , 84 : 13 – 28 .
   Web of Science ®Google Scholar
• Garibaldi , A , Aloj , C , Parodi , C and Gullino , M L . 1992 . “ Biological control of Fusarium wilt of carnation ” . In Biological control of plant diseases , Edited by: Tjamos , E S , Papavizas , C and Cook , R J . 105 – 108 . New York , NY : Plenum Press .
   Google Scholar
• Girlanda , M , Favero-Longo , S E , Lazzari , A , Segreto , R , Perotto , S and Siniscalco , C. 2009 . Indigenous microfungi and plants reduce soil nonylphenol contamination and stimulate resident microfungal communities . Appl Microbiol Biot , 82 : 359 – 370 .
   PubMed Web of Science ®Google Scholar
• Giubilei , M A , Leonardi , V , Federici , E , Covino , S , Šašek , V , Novotny , C and et , al. 2009 . Effect of mobilizing agents on mycoremediation and impact on the indigenous microbiota . J Chem Technol Biot , 84 : 836 – 844 .
   Web of Science ®Google Scholar
• Goretti , M , Ponzoni , C , Caselli , E , Marchegiani , E , Cramarossa , M R , Turchetti , B and et , al. 2011 . Bioreduction of α, β-unsaturated ketones and aldehydes by non-conventional yeast (NCY) whole-cells . Biores Technol , 102 : 3993 – 3998 .
   PubMed Web of Science ®Google Scholar
• Gullino , M , Migheli , Q and Mezzalama , M. 1995 . Risk analysis in the release of biological control agents . Antagonistic Fusarium oxysporum as a case study. Plant Dis , 79 : 1193 – 1201 .
   Google Scholar
• Hai , F I , Yamamoto , K and Fukushi , K. 2007 . Hybrid treatment system for dye wastewater . Crit Rev Environ Sci Technol , 37 : 315 – 377 .
   Web of Science ®Google Scholar
• Hall , I R , Brown , G T and Zambonelli , A . 2007 . Taming the truffle , 304 Portland, Oregon, USA : Timber Press .
   Google Scholar
• Harms , H , Schlosser , D and Wick , L Y. 2011 . Untapped potential: Exploiting fungi in bioremediation of hazardous chemicals . Nat Rev Microbiol , 9 : 177 – 192 .
   PubMed Web of Science ®Google Scholar
• Iotti , M , Lancellotti , E , Hall , I and Zambonelli , A. 2010 . The ectomycorrhizal community in natural Tuber borchii grounds . FEMS Microbiol Ecol , 72 : 250 – 260 .
   PubMed Web of Science ®Google Scholar
• Kaushik , P and Malik , A. 2009 . Fungal dye decolourization: Recent advances and future potential . Environ Int , 35 : 127 – 141 .
   PubMed Web of Science ®Google Scholar
• La Guardia , M , Venturella , G and Venturella , F. 2005 . On the chemical composition and nutritional value of Pleurotus taxa growing onUmbelliferous plants (Apiaceae) . J Agric Food Chem , 53 : 5997 – 6002 .
   PubMed Web of Science ®Google Scholar
• Martin , F , Kohler , A , Murat , C , Balestrini , R , Coutinho , P M , Jaillon , O and et , al. 2010 . Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis . Nature , 464 : 1033 – 1038 .
   PubMed Web of Science ®Google Scholar
• Mello , A , Miozzi , L , Vizzini , A , Napoli , C , Kowalchuk , G and Bonfante , P. 2010 . Bacterial and fungal communities associated to Tuber magnatum-productive niches . Plant Biosyst , 144 : 323 – 332 .
   Web of Science ®Google Scholar
• Mello , A , Murat , C and Bonfante , P. 2006 . Truffles: Much more than aprized and local fungal delicacy . FEMS Microbiol Lett , 260 : 1 – 8 .
   PubMed Web of Science ®Google Scholar
• Napoli , C , Mello , A , Borra , A , Vizzini , A , Sourzat , P and Bonfante , P. 2010 . Tuber melanosporum, when dominant, affects fungal dynamics in truffle grounds . New Phytol , 185 : 237 – 247 .
   PubMed Web of Science ®Google Scholar
• Pacioni , G , Leonardi , M , Taglienti , A , Cozzolino , S , Ritota , M , Sequi , P and et , al. 2010 . Internal structure and quality assessment of fresh truffle Tuber melanosporum by means of magnetic resonance imaging spectroscopy . Plant Biosyst , 144 : 826 – 832 .
   Web of Science ®Google Scholar
• Paterson Russell , R M. 2006 . Ganoderma – A therapeuic fungal biofactory . Phytochemistry , 67 : 1985 – 2001 .
   PubMed Web of Science ®Google Scholar
• Picco , A M , Angelini , P , Ciccarone , C , Franceschini , A , Ragazzi , A Rodolfi , M . 2011 . Biodiversity of emerging pathogenic and i.nvasive fungi in plants, animals and humans in Italy . Plant Biosyst , 145 991–999
   Web of Science ®Google Scholar
• Prigione , V , Zerlottin , M , Refosco , D , Tigini , V , Anastasi , A and Varese , G C. 2009 . Chromium removal from a real tanning effluent by autochthonous and allochthonous fungi . Bioresource Technol , 100 : 2770 – 2776 .
   PubMed Web of Science ®Google Scholar
• Reshetnikov , S V , Wasser , S P and Tan , K K. 2001 . Higher Basidiomycota as a Source of Antitumor and Immunostimulating Polysaccharides . Int Journ Med Mush , 3 : 361 – 394 .
   Google Scholar
• Romano , P , Capece , A and Jespersen , L . 2006 . “ Taxonomic and ecological diversity of food and beverage yeasts ” . In Yeasts in food and beverage , Edited by: Querol , A and Fleet , G . 13 – 53 . Germany : Springer-Verlag .
   Google Scholar
• Ruocco , M , Lanzuise , S , Vinale , F , Marra , R , Turrà , D , Woo , S L and et , al. 2009 . Identification of a new biocontrol gene in Trichoderma atroviride: The role of an ABC transporter membrane pump in the interaction with different plant pathogenic fungi . Mol Plant-Microbe Inter , 22 : 291 – 301 .
   PubMed Web of Science ®Google Scholar
• Salerni , E , Baglioni , F , Mazzei , T , Gardin , L , Ciabatti , F , Leopardi , P and et , al. 2010 . Efectos de las diversas técnicas culturales sobre la producción de Tuber aestivum Vitt . y de Tuber melanosporum Vitt. en dos plantaciones experimentales en Italia central. ZIZAK , 7 : 47 – 62 .
   Google Scholar
• Saltarelli , R , Ceccaroli , P , Iotti , M , Zambonelli , A , Buffalini , M , Casadei , L and et , al. 2009 . Biochemical characterisation and antioxidant activity of mycelium of Ganoderma lucidum from Central Italy . Food Chem , 116 : 143 – 151 .
   Web of Science ®Google Scholar
• Sampedro , I , Cajthaml , T , Marinari , S , Petruccioli , M , Grego , S and D'Annibale , A. 2009 . Organic matter transformation and detoxification in dry olive mill residue by the saprophytic fungus Paecilomyces farinosus. . Process Biochem , 44 : 216 – 225 .
   Web of Science ®Google Scholar
• Sarrocco , S , Mikkelsen , L , Vergara , M , Jensen , D F , Lubeck , M and Vannacci , G. 2006 . Histopathological studies of sclerotia of phytopathogenic fungi parasitized by a GFP transformed Trichoderma virens antagonistic strain . Mycol Res , 110 : 179 – 187 .
   PubMed Web of Science ®Google Scholar
• Smith , D , Ryan , M J and Stackebrandt , E. 2008 . “ The ex situ conservation of microorganisms: aiming at a certified quality management ” . In Biotechnology in encyclopedia of life support systems (EOLSS). Developed under the auspices of the UNESCO , Edited by: Delle , H W and DaSilva , E J . 1 – 30 . Oxford , , UK : Eolss Publishers .
   Google Scholar
• Splivallo , R , Ottonello , S , Mello , A and Karlovsky , P. 2010 . Truffle volatiles: From chemical ecology to aroma biosynthesis . NewPhytol , 189 : 688 – 699 .
   Web of Science ®Google Scholar
• Tigini V, Prigione V, Di Toro S, Fava F, Varese GC. 2009. Isolation and characterisation of polychlorinated biphenyl (PCB) degrading fungi from a historically contaminated soil.Microb Cell Fact 8: Available: http://www.microbialcellfactories.com/content/8/1/5
   Google Scholar
• Tigini , V , Prigione , V , Donelli , I , Anastasi , A , Freddi , G , Giansanti , P and et , al. 2011 . Cunninghamella elegans biomass optimisation for textile wastewater biosorption treatment: an analytical and ecotoxicological approach . App Microbiol Biot , 90 : 343 – 352 .
   PubMed Web of Science ®Google Scholar
• Tigini , V , Prigione , V , Giansanti , P , Mangiavillano , A , Pannocchia , A and Varese , G C. 2010 . Fungal biosorption, an innovative treatment for the decolourisation and detoxification of textile effluents . Water , 2 : 550 – 565 .
   Web of Science ®Google Scholar
• Vanhulle , S , Trovaslet , M , Enaud , E , Lucas , M , Taghavi , S , van der Lelie , D and et , al. 2008 . Decolorization, cytotoxicity and genotoxicity reduction during a combined ozonation/fungal treatment of dye-contaminated wastewater . Environ Sci Technol , 42 : 584 – 589 .
   PubMed Web of Science ®Google Scholar
• Vannacci , G , Pecchia , S and Resta , E. 1989 . Presence of Sclerotinia minor Jagger antagonists in soils from different mediterranean areas . II. Sclerotia decaying fungi. Acta Hort (ISHS) , 255 : 293 – 302 .
   Google Scholar
• Vannacci , G and Pecchia , S . 1986 . Evaluation of biological seed treatment for controlling seed-borne inoculum of Drechslera sorokiniana on barley . Med Fac Landbouww Rijksuniv Gent , 51/2b : 741 – 750 .
   Google Scholar
• Venturella , G , Pecorella , E , Saitta , A , Zambonelli , A and Morara , M . 2006 . Ecology and distribution of hypogeous fungi from Sicily (southern Italy) . Cryptogamie Mycol , 27 : 201 – 217 .
   Web of Science ®Google Scholar
• WO 2011/004254 . 2011 . “ The yeast strain Saccharomyces cerevisiae DBVPG24p, its use as an inoculant for the fermentative production of food, in particular Prosecco wine, and a relative inoculant ” .
   Google Scholar
• WO 2003/095493 . 2003 . “ Toxin-related antibodies with antimicrobial and antiviral activity ” .
   Google Scholar
• WO 2009/040862 . 2009 . “ Novel strain of Metschnikowia pulcherrima and uses thereof ” .
   Google Scholar
• WO 2010/145820 . 2010 . “ Cloning, yeast expression, purification and biological activity of the extension region of the soybean 7sglobulin alfa’ subunit involved in hep g2 cell cholesterol homeostasis ” .
   Google Scholar
• WO 2011/012254 . 2011 . “ Pichia pastoris as a host for the production of the ribosome-inactivating protein (rip) saporin and saporin fusion chimaeras ” .
   Google Scholar
• Zanaroli G, Di Toro S, Todaro D, Varese GC, Bertolotto A, FavaF. 2010. Characterization of two diesel fuel degrading microbial consortia enriched from a non acclimated, complex source of microorganisms. Microb Cell Factories 9: Available: http://www.microbialcellfactories.com/content/9/1/10
   Google Scholar
• Zervakis , G and Venturella , G. 2002 . “ Mushroom breeding and cultivation enhances ex situ conservation of Mediterranean Pleurotus taxa. 2002 ” . In Managing plant genetic diversity , Edited by: Engels , J MM , Rao , V R , Brown , A HD and Jackson , M T . 351 – 358 . UK : CABI Publishing .
   Google Scholar
• Zervakis , G I , Venturella , G and Papadopoulou , K. 2001 . Genetic polymorphism and taxonomic infrastructure of the Pleurotus eryngii species-complex as determined by RAPD analysis, isozyme profiles and ecomorphological characters . Microbiology , 147 : 3183 – 3194 .
   PubMed Web of Science ®Google Scholar
• Zhiqiang , A . 2005 . Mycology Vol. 22. Handbook of industrial mycology , 763 New York , NY : Marcel Dekker .
   Google Scholar