Development and comparison of RAPD, SCAR and AFLP markers for distinguishing some medicinally important species of the genus Phyllanthus

References

• Aparajita , S and Rout , G R . 2009 . Genetic differentiation of Albizia Leebbeck (L.) BENTH. Populations estimated by RAPD and ISSR markers . Plant Biosyst , 143 : 361 – 368 .
   Web of Science ®Google Scholar
• Bandyopadhyay , S and Raychaudhuri , S S . 2010 . Development of ITS based SCAR markers for some medicinally important species of Phyllanthus . Asian J Plant Sci , 9 ( 5 ) : 264 – 270 .
   Google Scholar
• Burdakci , F . 2001 . Random amplified polymorphic DNA (RAPD) markers . Turk J Biol , 25 : 185 – 196 .
   Google Scholar
• Chaudhary , L B and Rao , R R . 2002 . Taxonomic study of herbaceous species of Phyllanthus L. (Euphorbiaceae) in India . Phytotaxonomy , 2 : 143 – 162 .
   Google Scholar
• Chaurasia , A K , Subramaniam , V K , Bal , Krishna and Sane , P V . 2009 . RAPD based genetic variability among cultivated varieties of Aonla (Indian Gooseberry, Phyllanthus emblica L.) . Physiol Mol Biol Plants , 15 ( 2 ) : 169 – 173 .
   PubMedGoogle Scholar
• Cho , Y C , Gregorio , G B and Kang , K H . 1997 . Fingerprinting of Korean commercial japonica rice cultivars based on AFLP analysis . Rice Genet Newslett , 14 : 27 – 29 .
   Google Scholar
• Das , M , Bhattacharya , S and Pal , A . 2005 . Generation and characterization of scars by cloning and sequencing of RAPD products: A strategy for species-specific marker development in bamboo . Ann Bot , 95 : 835 – 841 .
   PubMed Web of Science ®Google Scholar
• Dumini , J and Di Michele , M . 2009 . Plant species delimitation: A comparison of morphological and molecular markers . Plant Biosyst , 143 : 528 – 542 .
   Web of Science ®Google Scholar
• Editorial Committee of Chinese Materia Medica . 1999 . Chinese materia medica , Shanghai , China : Shanghai Science and Technology Publishers (in Chinese) .
   Google Scholar
• Fang , G , Hammar , S and Rebecca , R . 1992 . A quick and inexpensive method for removing polysaccharides from plant genomic DNA . BioTechniques , 13 : 52 – 56 .
   PubMed Web of Science ®Google Scholar
• Jain , N , Shasany , A K , Sundaresan , V , Rajkumar , S , Darokar , M P Bagchi , G D . 2003 . Molecular diversity in Phyllanthus amarus assessed through RAPD analysis . Curr Sci , 85 : 1454 – 1458 .
   Web of Science ®Google Scholar
• Jian , S and Shi , S . 2009 . Genetic variation in Heritia littoralis (Malvaceae) from east and south Asia revealed by AFLP markers . Plant Biosyst , 143 : S56 – S62 .
   Web of Science ®Google Scholar
• Katterman , F RH and Shattuck , V I . 1983 . An effective method of DNA isolation from the mature leaves of Gossypium species that contain large amounts of phenolic terpenoids and tannins . Preparat Biochem , 13 : 347 – 359 .
   PubMed Web of Science ®Google Scholar
• Khanuja , S PS , Shasanay , A K , Darokar , M P and Kumar , S . 1999 . Rapid isolation of DNA from dry and fresh samples of plants producing large amounts of secondary metabolites and essential oils . Plant Mol Biol Rep , 17 ( 1 ) : 1 – 7 .
   Web of Science ®Google Scholar
• Kirtikar KR, Basu BD. 2003. Indian medicinal plants. 2nd ed. Uttaranchal, India: Oriental Enterprises. pp. 1606–1608
   Google Scholar
• Loomis , W D . 1974 . Overcoming problems of phenolics and quinones in the isolation of plant enzymes and organeUes . MethEnzymol , 31 : 528 – 545 .
   Google Scholar
• Mitra , R L and Jain , S K . 1985 . Concept of Phyllanthus niruri (Euphorbiaceae) in Indian floras . Bull Bot Surv India , 27 : 161 – 176 .
   Google Scholar
• Neeraj , P , Shasnay , A K , Singh , S , Khanuja , S PS and Kumar , S . 2008 . SCAR markers for correct identification of Phyllanthus amarus, P.fraternus, P.debilis and P.urinaria used in scientific investigation and dry leaf bulk trade . Planta Med , 74 : 296 – 301 .
   PubMed Web of Science ®Google Scholar
• Rege , N N , Thatte , U M and Dahanukar , S A . 1999 . Adaptogenic properties of six Rasayana herbs used in Ayurvedic medicine . Phytother Res , 13 : 275 – 291 .
   PubMed Web of Science ®Google Scholar
• Rout , G R , Senapati , S K and Aparajita , S . 2010 . Study of relationships among twelve Phyllanthus species with the use of molecular markers . Czech J Genet Plant Breed , 46 : 135 – 141 .
   Web of Science ®Google Scholar
• Sambrook , J and Russell , D W . 2001 . “ Molecular cloning ” . In A laboratory manual , New York : Cold Spring Harbor Laboratory Press .
   Google Scholar
• Singh , A , Negi , M S , Rajagopal , J , Bhatia , S , Tomar , U K Srivastava , P S . 1999 . Assessment of genetic diversity in Azadirachta indica using AFLP markers . Theor Appl Genet , 99 : 272 – 279 .
   Web of Science ®Google Scholar
• Theerakulpisut , P , Kanawapee , N , Maensiri , D , Bunnag , S and Chantaranothai , P . 2008 . Development of species specific SCAR markers for identification of three medicinal species of Phyllanthus . J Syst Evolut , 46 : 614 – 621 .
   Web of Science ®Google Scholar
• Wang , J , Ha , W Y , Ngan , F N , But , P PH and Shaw , P C . 2001 . Application of sequence characterized amplified region (SCAR) analysis to authenticate Panax species and their adulterants . Planta Med , 67 : 781 – 783 .
   PubMed Web of Science ®Google Scholar
• Warude , D , Chavan , P , Joshi , K and Patwardhan , B . 2003 . DNA isolation from fresh and dry plant samples with highly acidic tissue extracts . Plant Mol Biol Rep , 21 : 467a – 467f .
   Google Scholar
• Williams , J GK , Kubelik , A R , Livak , K J , Rafalski , J A and Tingey , S V . 1990 . DNA polymorphisms amplified by arbitrary primers are useful as genetic markers . Nucl Acids Res , 18 : 6531 – 6535 .
   PubMed Web of Science ®Google Scholar
• Zabeau , M and Vos , P . 1993 . “ Selective restriction fragment amplification: A general method for DNA finger printing ” . In European Patent Office , Publication 0534 858 AL .
   Google Scholar
• Zhang , J , Lu , Y and Yu , S . 2005 . Cleaved AFLP (c AFLP) a modified amplified fragment length polymorphism analysis for cotton . TAG , 111 ( 7 ) : 1385 – 1395 .
   PubMed Web of Science ®Google Scholar