Effects of fragmentation phenomena on the genetic structure and gene flow in Centaurea cineraria group (Asteraceae) in the Mediterranean Basin

REFERENCES

• AguilarR, AshworthL, GalettoL, AizenMA. 2006. Plant reproductive susceptibility to habitat fragmentation: Review and synthesis through a meta-analysis. Ecol Lett9: 968–980.
   PubMed Web of Science ®Google Scholar
• AguilarR, QuesadaM, AshworthL, HerreriasdiegoY, LoboJ. 2008. Genetic consequences of habitat fragmentation in plant populations: Susceptible signals in plant traits and methodological approaches. Mol Ecol17: 5177–5188.
   PubMed Web of Science ®Google Scholar
• BanchevaS, GeraciA, RaimondoFM. 2006. Genetic diversity in the Centaurea cineraria group (Compositae) in Sicily using isozymes. Plant Biosyst140: 10–16.
   Web of Science ®Google Scholar
• BlasiC, FrondoniR. 2011. Modern perspectives for plant sociology: The case of ecological land classification and the ecoregions of Italy. Plant Biosyst145(Suppl. 1): 30–37.
   Web of Science ®Google Scholar
• BurrascanoS, RosatiL, BlasiC. 2009. Plant species diversity in Mediterranean old-growth forests: A case study from central Italy. Plant Biosyst143(1): 190–200.
   Web of Science ®Google Scholar
• Cela RenzoniG, ViegiL. 1979. The “Centaurea cineraria” complex in Italy. Webbia34(1): 487–488.
   Google Scholar
• Cela RenzoniG, ViegiL. 1982. Centaurea cineraria s.l. (Asteraceae) in Italia, Revisione citotassonomica. Atti Soc Tosc Sci Nat MemLXXXIX: 99–144.
   Google Scholar
• ChapuisMP, EstoupA. 2007. Microsatellite null alleles and estimation of population differentiation. Mol Biol Evol24: 621–631.
   PubMed Web of Science ®Google Scholar
• ColasB, OlivieriI, RibaM. 1997. Centaurea corymbosa, a cliff-dwelling species tottering on the brink of extinction: A demographic and genetic study. Proc Nat Acad Sci USA29: 3471–3476.
   Web of Science ®Google Scholar
• ContiF, AbbateG, AlessandriniA, BlasiC. 2005. An annotated checklist of the Italian vascular Flora. Roma: Palombi Editori.
   Google Scholar
• DamboldtJ, MatthasU. 1975. Chromosomen zahleneiniger mediterraner und mitteleuropais cher Centaurea-Arten (Asteraceae). Plant Syst Evol123: 107–115.
   Web of Science ®Google Scholar
• de CandolleAP. 1838. Prodromussy stematis naturalis regni vegetabilis. Vol. 6. Paris: Treuttel et Wurtz.
   Google Scholar
• Dempster AP, Laird NM, Rubin DB. 1997. Maximum likelihood from incomplete data via the EM algorithm. J R Stat Soc Ser B Stat Methodol 39(1): 1–38.
   Google Scholar
• DoyleJJ, DoyleJL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull19: 11–15.
   Google Scholar
• DupanloupI, SchneiderS, ExcofierL. 2002. A simulated annealing approach to define the genetic structure of populations. Mol Ecol11: 2571–2581.
   PubMed Web of Science ®Google Scholar
• El MousadikA, PetitEJ. 1996. High level of genetic differentiation for allelic richness among population of the argan tree [Arganiaspinosa (L.) Skeels] endemic to Morocco. Theor Appl Genetics92: 832–839.
   PubMed Web of Science ®Google Scholar
• EstoupA, AngersB. 1998. Microsatellites and minisatellites for molecular ecology: Theoretical and empirical considerations. In: CarvalhoGR, editor. Advances in molecular ecology. Amsterdam: IOS Press. pp. 55–86.
   Google Scholar
• EvannoG, RegnautS, GoudetJ. 2005. Detecting the number of clusters of individuals using the software structure: A simulation study. Mol Ecol14: 2611–2620.
   PubMed Web of Science ®Google Scholar
• ExcoffierL, SmousePE, QuattroJM. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA (mtDNA) restriction data. Genetics131: 479–491.
   PubMed Web of Science ®Google Scholar
• EzardTHG, TravisJMJ. 2006. The impact of habitat loss and fragmentation on genetic drift and fixation time. Oikos114:(2) 367–375.
   Web of Science ®Google Scholar
• FahrigL. 2003. Effects of habitat fragmentation on biodiversity. Annu Rev Ecol Evol Syst34: 487–515.
   Web of Science ®Google Scholar
• FalushD, StephensM, PritchardJK. 2003. Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies. Genetics164: 1567–1587.
   PubMed Web of Science ®Google Scholar
• FerrariniE. 1971. Flora delle isole Palmaria e Tino (Golfo della Spezia). Giorn Bot Ital105: 237–279.
   Google Scholar
• FrévilleH, JustyF, OlivieriI. 2001. Comparative allozyme and microsatellite population structure in a narrow endemic plant species, Centaurea corymbosa Pourret (Asteraceae). Mol Ecol10: 879–889.
   PubMed Web of Science ®Google Scholar
• Garcia-JacasN, UysalT, RomashchenkoK, Suarez-SantiagoVN, ErtugrulK, SusannaA. 2006. Centaurea revisited: A molecular survey of the Jacea group. Ann Bot (Oxford)98: 741–753.
   PubMed Web of Science ®Google Scholar
• GiardinaG, RaimondoFM, SpadaroV. 2007. A catalogue of plants growing in Sicily. Bocconea20: 1–582.
   Google Scholar
• Goudet J. 1995. FSTAT (Version 1.2) a computer program to calculate F-Statistics. J Hered 86: 485–486.
   Google Scholar
• Goodman SJ. 1997. RST Calc: a collection of computer-programs for calculating estimates of genetic differentiation from microsatellite data and determining their significance. Mol Ecol 6: 881–885.
   Google Scholar
• GuarinoC, MenaleB, La ValvaV. 1993–1994. Corologia e tipificazione di Lonicera stabiana Guss. Ex Pasquale (Caprifoliaceae), endemismo puntiforme della Penisola Sorrentina (Campania). Delpinoa35–36: 43–54.
   Google Scholar
• GuarinoC, RamponeS. 2006. A morphometric analysis of Centaurea sect. Dissectae (Compositae). Bocconea19: 77–88.
   Google Scholar
• GuarinoC, SantoroS, De SimoneL, CiprianiG, TestolinR. 2008. Differentiation in DNA fingerprinting among species of the genus Acer L. in Campania (Italy). Plant Biosyst142: 454–461.
   Web of Science ®Google Scholar
• HardyOJ, Gonzalez-MartinezSC, ColasB, FrevilleH, MignotA, OlivieriI. 2004. Fine-scale genetic structure and gene dispersal in Centaurea corymbosa (Asteraceae). II. Correlated paternity within and among sibship. Genetics168: 1601–1614.
   PubMed Web of Science ®Google Scholar
• HilpoldA, Garcia-JacasN, VilatersanaR, SusannaA. 2009. Two additions to the Jacea-Lepteranthus complex: Parallel adaptation in the enigmatic species Centaurea subtilis and C. exarata. Collect Bot (Barcelona)28: 19–30.
   Google Scholar
• HilpoldA, SchonswetterP, SusannaA, Garcia-JacasN, VilatersanaR. 2011. Evolution of the central Mediterranean Centaurea cineraria group (Asteraceae): Evidence for relatively recent, allopatric diversification following transoceanic seed dispersal. Taxon60: 528–538.
   Web of Science ®Google Scholar
• Honnay O, Jacquemyn H. 2007. Susceptibility of common and rare plant species to the genetic consequences of habitat fragmentation. Conserv Biol 21: 823–831.
   Google Scholar
• La ValvaV. 1981–1982. Piante endemiche o rare dell'Italia meridionale. Delpinoa23–24: 115–128.
   Google Scholar
• La ValvaV. 1992. Aspetti corologici della flora di interesse fitogeografico nell'Appennino meridionale. Giorn Bot Ital126(2): 131–144.
   Google Scholar
• La Valva V. 1996. La conservazione del patrimonio vegetale nella gestione e tutela dell'ambiente. Atti della Conferenza sulla Ricerca Scientifica in Basilicata, Potenza.
   Google Scholar
• LebloisR, EstoupA, StreiffR. 2006. Genetics of recent habitat contraction and reduction in population size: Does isolation by distance matter?Mol Ecol15: 3601–3615.
   PubMed Web of Science ®Google Scholar
• LoweAJ, BoshierD, WardM, BaclesCFE, NavarroC. 2005. Genetic resource impacts of habitat loss and degradation; reconciling empirical evidence and predicted theory for neotropical trees. Heredity95: 255–273.
   PubMed Web of Science ®Google Scholar
• Lugon-MoulinN, BrunnerH, WyttenbachA, HausserJ, GoudetJ. 1999. Hierarchical analyses of genetic differentiation in a hybrid zone of Sorexaraneus (Instectivora: Soricidae). Mol Ecol8: 419–431.
   Web of Science ®Google Scholar
• MazzoleniS, LoportoA, BlasiC. 1992. Multivariate analysis of climatic patterns of the Mediterranean basin. Vegetatio98: 1–12.
   Google Scholar
• McGarigalK, CushmanSA. 2002. Comparative evaluation of experimental approaches to the study of habitat fragmentation effects. Ecol Appl12: 335–345.
   Web of Science ®Google Scholar
• MédailF, QuézelP. 1997. Hotspots analysis for conservation of plant biodiversity in the Mediterranean basin. Ann Mo Bot Garden84: 112–127.
   Web of Science ®Google Scholar
• MercuriAM, SadoriL, BlasiC. 2010. Archeobotany for cultural landscape and human impact reconstructions. Plant Biosyst144(2): 860–864.
   Web of Science ®Google Scholar
• MichalakisY, VeuilleM. 1996. Length variation of CAG/CAA trinucleotide repeats in natural populations of Drosophila melanogaster and its relation to recombination rate. Genetics143: 1713–1725.
   PubMed Web of Science ®Google Scholar
• MyersN, MittermeierRA, MittermeierCG, da FonsecaGAB, KentJ. 2000. Biodiversity hotspots for conservation priorities. Nature403: 853–858.
   PubMed Web of Science ®Google Scholar
• NasonJD, AldrichPR, HamrickJL. 1997. Dispersal and the dynamics of genetic structure in fragmented tropical tree populations. In: LauranceWF, BierregaardRO, editors. Tropical forest remnants: Ecology, management and conservation of fragmented communities. Chicago, IL: University of Chicago Press. pp. 304–320.
   Google Scholar
• NeiM, RoychoudhuryAK. 1972. Gene differences between Caucasian, Negro and Japanese populations. Science177: 434–436.
   PubMed Web of Science ®Google Scholar
• OchsmannJ. 2000. Morphologische und molecular systematische Untersuchungen an der Centaurea stoebe L.-Gruppe (Asteraceae-Cardueae) in Europa. Diss Bot324: 1–242.
   Google Scholar
• OostermeijerJGB, LuijtenSH, den NijsJCM. 2003. Integrating demographic and genetic approaches in plant conservation. Biol Conserv113: 389–398.
   Web of Science ®Google Scholar
• OuborgNJ, VergeerP, MixC. 2006. The rough edges of the conservation genetics paradigm for plants. J Ecol94: 1233–1248.
   Web of Science ®Google Scholar
• PalomboC, ChiericiG, MarchettiM, TognettiR. 2013. Is land abandonment affecting forest dynamics at high elevation in Mediterranean mountains more than climate change?Plant Biosyst147(1): 1–11.
   Web of Science ®Google Scholar
• PeakallR, SmousePE. 2006. GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes6: 288–295.
   Web of Science ®Google Scholar
• PignattiS. 1982. Flora d'Itala. Vol. 3. Bologna: Edagricole.
   Google Scholar
• PritchardJK, StephensM, DonnellyP. 2000. Inference of population structure using multilocus genotype data. Genetics1555: 945–959.
   Google Scholar
• Pritchard JK, Wen W. 2004. Documentation for STRUCTURE software: Version 2. Available: http://pritch.bsd.uchicago.edu.
   Google Scholar
• RaimondoFM, BanchevaST. 2004. Centaurea erycina (Asteraceae), a new species from N-W Sicily. Bocconea17: 299–306.
   Google Scholar
• RaimondoFM, BanchevaST, IlardiV. 2004. Centaurea saccensis (Asteraceae), a new species from S-W Sicily. Bocconea17: 293–298.
   Google Scholar
• RitlandK. 1989. Correlated matings in the partial selfer, Mimulus guttatus. Evolution43: 848–859.
   PubMed Web of Science ®Google Scholar
• RitlandK. 2002. Extensions of models for the estimation of mating systems using independent loci. Heredity88: 221–228.
   PubMed Web of Science ®Google Scholar
• RitlandK, JainSK. 1981. A model for the estimation of outcrossing rate and gene frequencies using n independent loci. Heredity47: 35–52.
   Web of Science ®Google Scholar
• RosatiL, FipaldiniM, MarignaniM, BlasiC. 2010. Effects of fragmentation on vascular plant diversity in a Mediterranean forest archipelago. Plant Biosyst144(1): 38–46.
   Web of Science ®Google Scholar
• RossKG, KriegerMJ, ShoemakerDD, VargoE, KellerL. 1997. Hierarchical analysis of genetic structure in native fire ant populations: results from three classes of molecular markers. Genetics147: 643–655.
   PubMed Web of Science ®Google Scholar
• RoussetF. 1996. Equilibrium values of measures of population subdivision for stepwise mutation processes. Genetics142: 1357–1362.
   PubMed Web of Science ®Google Scholar
• SalaOE, ChapinFSI, ArmestoJJ. 2000. Global biodiversity scenarios for the year 2100. Science287: 1770–1774.
   PubMed Web of Science ®Google Scholar
• SaunderDA, HobbsRJ, MargulesCR. 1991. Biological consequences of ecosystem fragmentation: a review. Conserv Biol5: 18–32.
   Web of Science ®Google Scholar
• SchonswetterP, SolstadH, GarciaPE, ElvenR. 2009. A combined molecular and morphological approach to the taxonomically intricate European mountain plant Papaver alpinum s.l. (Papaveraceae) - taxa or informal phylogeographical groups?Taxon58: 1326–1343.
   Web of Science ®Google Scholar
• SlatkinM. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics139: 457–462.
   PubMed Web of Science ®Google Scholar
• SorkVI, SmousePE. 2006. Genetic analysis of landscape connectivity in tree populations. Landscape Ecol21: 821–836.
   Web of Science ®Google Scholar
• Suárez-SantiagoVN, BlancaG, Ruiz-RejonM, Garrido-RamosMA. 2007a. Satellite DNA evolutionary patterns under a complex evolutionary scenario: The case of Acrolophus subgroup (Centaurea L. Compositae) from the western Mediterranean. Gene404: 80–92.
   PubMed Web of Science ®Google Scholar
• Suárez-SantiagoVN, SalinasMJ, Garcia-JacasN, SoltisPS, SoltisDE, BlancaG. 2007b. Reticolate evolution in the Acrolophus subgroup (Centaurea L. Compositae) from the western Mediterranean: Origin and diversification of section Willkommia Blanca. Mol Phylogenet Evol43: 156–172.
   PubMed Web of Science ®Google Scholar
• ThompsonJD. 2005. Plant evolution in the Mediterranean. New York: Oxford University Press.
   Google Scholar
• TroiaA, RaimondoFM, MazzolaP. 2012. Mediterranean Island biogeography: Analysis of fern species distribution in the system of islets around Sicily. Plant Biosyst146(3): 576–585.
   Web of Science ®Google Scholar
• TutinTG, BurgesNA, ChaterAO, EdmondsonJR, HeywoodVH, MooreDM, et al. 1996. Flora Europea. vol. IV. Cambridge, UK: Cambridge University Press. 270 pp.
   Google Scholar
• ViegiL, Cela RenzoniG, GarbariF, CorsiG. 1972. Variabilità e microevoluzione in Centaurea cineraria (Asteraceae). Giorn Bot Ital106(5): 300–301.
   Google Scholar
• WeirBS, CockerhamCC. 1984. Estimating F-statistics for the analysis of population structure. Evolution38: 1358–1370.
   PubMed Web of Science ®Google Scholar
• Wright S. 1965. The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution 19: 395–420.
   Google Scholar
• YoungAG, BoyleT, BrownT. 1996. The population genetic consequences of habitat fragmentation for plants. Trends Ecol Evol11: 413–418.
   PubMed Web of Science ®Google Scholar