Halophile wheatgrass Thinopyrum elongatum (Host) D.R. Dewey (Poaceae) in three Apulian coastal wetlands: vegetation survey and genetic diversity

References

• Acosta A, Ercole S, Stanisci A, Pillar VDP, Blasi C. 2007. Coastal vegetation zonation and dune morphology in some Mediterranean ecosystems. J Coastal Res. 236(6):1518–1524. https://doi.org/http://dx.doi.org/10.2112/05-0589.1.
   Google Scholar
• Adamo M, Tarantino C, Tomaselli V, Veronico G, Nagendra H, Blonda P. 2016. Habitat mapping of coastal wetlands using expert knowledge and Earth observation data. J Appl Ecol. 53(5):1521–1532.
   Web of Science ®Google Scholar
• Álvarez-Rogel J, Jiménez-Càrceles FJ, Roca MJ, Ortiz R. 2007. Changes in soils and vegetation in a Mediterranean coastal salt marsh imparted by human activies. Estuar Coast Shelf S. 73(3-4):510–526. https://doi.org/http://dx.doi.org/10.1016/j.ecss.2007.02.018.
   Web of Science ®Google Scholar
• Bartolucci F, Peruzzi L, Galasso G, Albano A, Alessandrini A, Ardenghi NMG, Astuti G, Bacchetta G, Ballelli S, Banfi E, et al. 2018. An updated checklist of the vascular flora native to Italy. Plant Biosyst. 152(2):179–303.
   Web of Science ®Google Scholar
• Biondi E, Blasi C, Allegrezza M, Anzellotti I, Azzella MM, Carli E, Casavecchia S, Copiz R, Del Vico E, Facioni L, et al. 2014. Plant communities of Italy: the Vegetation Prodrome. Plant Biosyst. 148 (4):728–814. https://doi.org/http://dx.doi.org/10.1080/11263504.2014.948527.
   Web of Science ®Google Scholar
• Blasi C, Michetti L, Del Moro MA, Testa O, Teodonio L. 2007. Climate change and desertification vulnerability in Southern Italy. Phytocoenologia. 37(3-4):495–521.
   Web of Science ®Google Scholar
• Boenzi F, Caldara M, Pennetta L. Simone O. 2006. Environmental aspects related to the physical evolution of some wetlands along the Adriatic coast of Apulia (Southern Italy): a review. J Coastal Res. 39:170–175. http://www.jstor.org/stable/25741556.
   Google Scholar
• Booth RE, Grime JP. 2003. Effects of genetic impoverishment on plant community diversity. J Ecol. 91(5):721–730.
   Web of Science ®Google Scholar
• Braun-Blanquet J. 1964. Pflanzensoziologie. Grundzuge der Vegetationskunde. Vol. 3. Wien (Austria): Aufl, Springer Verl; p. 330.
   Google Scholar
• Brullo S, Furnari F. 1976. Le associazioni vegetali degli ambienti palustri costieri della Sicilia. Not Fitosoc. 11:1–43.
   Google Scholar
• Brullo S, Furnari F. 1988. La vegetazione costiera della Cirenaica. Bollettino Accademia Gioenia Scienze Naturali Catania. 21(334):37–117.
   Google Scholar
• Bunce RGH, Bogers MMB, Evans D, Halada L, Jongman RHG, Mucher CA, Bauch B, de Blust G, Parr TW, Olsvig-Whittaker L. 2013. The significance of habitats as indicators of biodiversity and their links to species. Ecol Indic. 33:19–25.
   Web of Science ®Google Scholar
• Cassidy BG, Dvorak J, Anderson OD. 1998. The wheat low molecular-weight glutenin genes: characterization of six new genes and progress in understanding gene family structure. Theor Appl Genet. 96:743–750.
   Web of Science ®Google Scholar
• Castroviejo S, Cirujano S. 1980. Sarcocornietea en La Mancha (España). Anal Jard Bot Madrid. 37(1):143–154.
   Google Scholar
• Ceoloni C, Kuzmanović L, Gennaro A, Forte P, Giorgi D, Grossi MR, Bitti A. 2014. Genomes, chromosomes and genes of the wheatgrass genus Thinopyrum: the value of their transfer into wheat for gains in cytogenomic knowledge and sustainable breeding. In: Tuberosa R, Graner A, Frison E, editors. Genomics of plant genetic resources. Dordrecht: Springer; p. 333–358.
   Google Scholar
• Che YH, Li LH, He PR. 2004. Sampling strategy for genetic diversity in Agropyron Gaertn. based on gliadin. J Plant Genet Resour. 3:216–221. 国家自然科学基金资助项目 (3 9970 0 5 9) (in Chinese).
   Google Scholar
• Colmer TD, Flowers TJ, Munns R. 2006. Use of wild relatives to improve salt tolerance in wheat. J Exp Bot. 57 (5):1059–1078.
   PubMed Web of Science ®Google Scholar
• Crutsinger GM, Collins MD, Fordyce JA, Gompert Z, Nice CC, Sanders NJ. 2006. Plant genotypic diversity predicts community structure and governs an ecosystem process. Science. 313(5789):966–968.
   PubMed Web of Science ®Google Scholar
• Dewey DR. 1984. The genomic system of classification as a guide to intergeneric hybridization in the perennial Triticeae. In: Gustafson JP, editor. Gene manipulation in plant improvement. Stadler Genetics Symposia Series. Boston, MA: Springer; p. 209–279.
   Google Scholar
• Doing H. 1985. Coastal fore-dune zonation and succession in various parts of the world. Plant Ecol. 61(1-3):65–75.
   Google Scholar
• Dvorak J. 1980. Homoeology between Agropyron elongatum chromosomes and Triticum aestivum chromosomes. Can J Genet Cytol. 22:237–259.
   Google Scholar
• Dvorak J, Edge M, Ross K. 1988. On the evolution of the adaptation of Lophopyrum elongatum to growth in saline environments. Proc Natl Acad Sci USA. 85(11):3805–3809.
   PubMed Web of Science ®Google Scholar
• Dvořák J, Kasarda DD, Dietler MD, Lew E-JL, Anderson OD, Litts JC, Shewry PR. 1986. Chromosomal location of seed storage protein genes in the genome of Elytrigia elongata. Can J Genet Cytol. 28(5):818–830.
   Google Scholar
• Dvorak J, Knott DR. 1974. Disomic and ditelosomic additions of diploid Agropyron elongatum chromosomes to Triticum aestivum. Can J Genet Cytol. 16(2):399–417.
   Google Scholar
• FAO, IUSS Working Group, WRB. 2007. World reference base for soil resources, 2006.
   Google Scholar
• Feng D, Xia G, Zhao S, Chen F. 2004. Two quality-associated HMW glutenin subunits in a somatic hybrid line between Triticum aestivum and Agropyron elongatum. Theor Appl Genet. 110(1):136–144.
   PubMed Web of Science ®Google Scholar
• Frondoni R, Iberite M. 2002. The halophile vegetation of the sedimentary coast of Lazio (central Tyrrhenian district, Italy). Plant Biosyst. 136(1):49–68. https://doi.org/http://dx.doi.org/10.1080/11263500212331358521.
   Web of Science ®Google Scholar
• Fu S, Lv Z, Qi B, Guo X, Li J, Liu B, Han F. 2012. Molecular cytogenetic characterization of wheat–Thinopyrum elongatum addition, substitution and translocation lines with a novel source of resistance to wheat fusarium head blight. J Genet Genomics. 39(2):103–110.
   PubMed Web of Science ®Google Scholar
• Garg M, Tanaka H, Ishikawa N, Takata K, Yanaka M, Tsujimoto H. 2009. Agropyron elongatum HMW-glutenins have the potential to improve wheat end product quality through targeted chromosome introgression. J Cereal Sci. 50(3):358–363. https://doi.org/http://dx.doi.org/10.1016/j.jcs.2009.06.012.
   Web of Science ®Google Scholar
• Gazanchian A, Hajheidari M, Sima NK, Salekdeh GH. 2007. Proteome response of Elymus elongatum to severe water stress and recovery. J Exp Bot. 58(2):291–300.
   PubMed Web of Science ®Google Scholar
• Gazza L, Galassi E, Ciccoritti R, Cacciatori P, Pogna NE. 2016. Qualitative traits of perennial wheat lines derived from different Thinopyrum species. Genet Resour Crop Evol. 63(2):209–219.
   Web of Science ®Google Scholar
• Géhu J-M, Costa M, Scoppola A, Biondi E, Marchiori S, Peris JB, Frank J, Caniglia G, Veri L. 1984. Essai synsystématique et synchorologique sur les végétations littorales italiennes dans un but conservatoire. I. Dunes et vases salees. Doc Phytosoc. 8:394–474.
   Google Scholar
• Gibbs JP. 2000. Wetlands loss and biodiversity conservation. Conserv Biol. 14(1):314–317.
   Web of Science ®Google Scholar
• Gray JS. 1997. Marine biodiversity: patterns, threats and conservation needs. Biodivers Conserv. 6(1):153–175.
   Web of Science ®Google Scholar
• Hammer K, Arrowsmith N, Gladis T. 2003. Agrobiodiversity with emphasis on plant genetic resources. Naturwissenschaften. 90(6):241–250.
   PubMedGoogle Scholar
• Hayes RC, Newell MT, DeHaan LR, Murphy KM, Crane S, Norton MR, Wade LJ, Newberry M, Fahim M, Jones SS, et al. 2012. Perennial cereal crops: an initial evaluation of wheat derivatives. Field Crops Res. 133:68–89.
   Web of Science ®Google Scholar
• Hu LJ, Li GR, Zeng ZX, Chang ZJ, Liu C, Zhou JP, Yang ZJ. 2011. Molecular cytogenetic identification of a new wheat-Thinopyrum substitution line with stripe rust resistance. Euphytica. 177(2):169–177.
   Web of Science ®Google Scholar
• Hughes AR, Inouye BD, Johnson MTJ, Underwood N, Vellend M. 2008. Ecological consequences of genetic diversity. Ecol Lett. 11(6):609–623.
   PubMed Web of Science ®Google Scholar
• Ikeda TM, Araki E, Fujita Y, Yano H. 2006. Characterization of low-molecular-weight glutenin subunit genes and their protein products in common wheats. Theor Appl Genet. 112(2):327–334.
   PubMed Web of Science ®Google Scholar
• Jackson EA, Holt LM, Payne PI. 1983. Characterisation of high molecular weight gliadin and low-molecular-weight glutenin subunits of wheat endosperm by two-dimensional electrophoresis and the chromosomal localisation of their controlling genes. Theor Appl Genet. 66(1):29–37.
   PubMedGoogle Scholar
• Karan R, Subudhi PK. 2012. Approaches to increasing salt tolerance in crop plants. In: Abiotic stress responses in plants. New York (NY): Springer; p. 63–88.
   Google Scholar
• Kubra G, Gul A, Mujeeb-Kazi A. 2015. Use of Alien diversity to combat some major biotic stresses in Triticum aestivum L. In: Hakeem K, editor. Crop production and global environmental issues. Cham: Springer; p. 319–347.
   Google Scholar
• Kumar A, Garg M, Kaur N, Chunduri V, Sharma S, Misser S, Kumar A, Tsujimoto H, Dou QW, Gupta RK. 2017. Rapid development and characterization of chromosome specific translocation line of Thinopyrum elongatum with improved dough strength. Frontiers Plant Sci. 8:1593.
   PubMed Web of Science ®Google Scholar
• Levin N, Elron E, Gasith A. 2009. Decline of wetland ecosystems in the coastal plain of Israel during the 20th century: implications for wetland conservation and management. Landscape Urban Plann. 92(3-4):220–232. https://doi.org/http://dx.doi.org/10.1016/j.landurbplan.2009.05.009.
   Web of Science ®Google Scholar
• Li S, Zhang Z, Chen F, Xia G. 2012. Molecular Cloning and Comparative Analysis of Novel SRL-/TRQ-type ω-Gliadin Genes from Tall Wheatgrass. Plant Mol Biol Rep. 30(3):599–604.
   Web of Science ®Google Scholar
• Li Z, Li B, Tong Y. 2008. The contribution of distant hybridization with decaploid Agropyron elongatum to wheat improvement in China. J Genet Genomics. 35(8):451–456. https://doi.org/http://dx.doi.org/10.1016/S1673-8527(08)60062-4.
   PubMed Web of Science ®Google Scholar
• Liu S, Gao X, Lu B, Xia G. 2008. Characterization of the genes coding for the high molecular weight glutenin subunits in Lophopyrum elongatum. Hereditas. 145(1):48–57.
   PubMed Web of Science ®Google Scholar
• Liu S, Gao X, Xia G. 2008. Characterizing HMW-GS alleles of decaploid Agropyron elongatum in relation to evolution and wheat breeding. Theor Appl Genet. 116(3):325–334.
   PubMed Web of Science ®Google Scholar
• Liu S, Zhao S, Chen F, Xia G. 2007. Generation of novel high quality HMW-GS genes in two introgression lines of Triticum aestivum/Agropyron elongatum. BMC Evol Biol. 7(1):76.
   PubMedGoogle Scholar
• Lou H, Dong L, Zhang K, Wang DW, Zhao M, Li Y, Rong C, Qin H, Zhang A, Dong Z, et al. 2017. High-throughput mining of E-genome-specific SNPs for characterizing Thinopyrum elongatum introgressions in common wheat. Mol Ecol Resour. 17(6):1318–1329.
   PubMed Web of Science ®Google Scholar
• Luo Z, Chen F, Feng D, Xia G. 2005. LMW-GS genes in Agropyron elongatum and their potential value in wheat breeding. Theor Appl Genet. 111(2):272–280.
   PubMed Web of Science ®Google Scholar
• Ma J, Zhou R, Dong Y, Jia J. 2000. Control and inheritance of resistance to yellow rust in Triticum aestivum-Lophopyrum elongatum chromosome substitution lines. Euphytica. 111(1):57–60.
   Web of Science ®Google Scholar
• Margiotta B, Colaprico G, D’ovidio R, Lafiandra D. 1993. Characterization of high Mr subunits of glutenin by combined chromatographic (RP-HPLC) and electrophoretic separations and restriction fragment length polymorphism (RFLP) analyses of their encoding genes. J Cereal Sci. 17(3):221–236.
   Web of Science ®Google Scholar
• Margiotta B, Colaprico G, Urbano M, Tommasi F, Tomaselli V. 2013a. Elymus elongatus: plant communities and genetic diversity in some Apulian costal wetlands. In: 2nd FIP International Conference, Rome, April 11, p. 34.
   Google Scholar
• Margiotta B, Colaprico G, Urbano M, Tomaselli V. 2013b. Plant and genetic diversity of Elymus farctus in Apulian coastal environments. In: 22nd EVS International Workshop, Rome, April 9–11.
   Google Scholar
• McCune B, Mefford MJ. 1997. PC-ORD. Versión 3.0. MjM Softwre Design. Gleneden Beach, OR.
   Google Scholar
• Metakovsky EV, Branlard GP, Graybosch RA, Wrigley C, Békés F, Bushuk W. 2006. Gliadins of common wheat: polymorphism and genetics. In: Wrigley C, Bekes F, Bushuk W, editors. Gliadin and glutenin: the unique balance of wheat quality. St Paul, MN: AACC International; p. 35–84.
   Google Scholar
• Molina JA, Casermeiro MA, Moreno PS. 2003. Vegetation composition and soil salinity in a Spanish Mediterranean coastal ecosystem. Phytocoenologia. 33(2-3):475–494.
   Web of Science ®Google Scholar
• Moustakas M, Symeonidis L, Ouzounidou G. 1988. Genome relationships in the Elytrigia group of the genus Agropyron (Poaceae) as indicated by seed protein electrophoresis. Pl Syst Evol. 161(3-4):147–153.
   Web of Science ®Google Scholar
• Mucina L, Bültmann H, Dierßen K, Theurillat JP, Raus T, Čarni A, Šumberová K, Willner W, Dengler J, Gavilán García R, et al. 2016. Vegetation of Europe: hierarchical floristic classification system of vascular plant, bryophyte, lichen, and algal communities. Appl Veg Sci. 19:3–264.
   Web of Science ®Google Scholar
• Nie L, Yang Y, Zhang J, Fu T. 2019. Disomic chromosome addition from Thinopyrum intermedium to bread wheat appears to confer stripe rust resistance. Euphytica. 215(3):56.
   Web of Science ®Google Scholar
• Niu ZX, Klindworth DL, Wang RR-C, Jauhar PP, Larkin PJ, Xu SS. 2011. Characterization of HMW glutenin subunits in Thinopyrum intermedium, Th. bessarabicum, Lophopyrum elongatum, Aegilops markgrafii, and their addition lines in wheat. Crop Sci. 51(2):667–677.
   Web of Science ®Google Scholar
• Payne PI, Holt LM, Lawrence GJ, Law CN. 1982. The genetics of gliadin and glutenin, the major storage proteins of the wheat endosperm. Plant Food Hum Nutr. 31(3):229–241.
   Web of Science ®Google Scholar
• Podani J. 2001. SYN-TAX 2000, computer program for multivariate analysis in ecology and taxonomy.
   Google Scholar
• Rayburn AL, Gill BS. 1985. Use of biotin-labeled probes to map specific DNA sequences on wheat chromosomes. J Hered. 76 (2):78–81.
   Web of Science ®Google Scholar
• Rivas-Martìnez S, Penas A, Diaz TE. 2004. Biogeographic map of Europe. Cartographic Service. Léon (Spain): University of Léon.
   Google Scholar
• Rogel JA, Ariza FA, Silla RO. 2000. Soil salinity and moisture gradients and plant zonation in Mediterranean salt marshes of Southeast Spain. Wetlands. 20(2):357–372. https://doi.org/http://dx.doi.org/10.1672/0277-5212(2000)020[0357:SSAMGA]2.0.CO;2.
   Web of Science ®Google Scholar
• Sarma D, Knott DR. 1966. The transfer of leaf-rust resistance from Agropyron to Triticum by irradiation. Can J Genet Cytol. 8(1):137–143.
   Google Scholar
• Sharma HC, Ohm HW, Lister RM, Foster JE, Shukle RH. 1989. Response of wheatgrasses and wheat × wheatgrass hybrids to barley yellow dwarf virus. Theor Appl Genet. 77(3):369–374.
   PubMed Web of Science ®Google Scholar
• Shen X, Kong L, Ohm H. 2004. Fusarium head blight resistance in hexaploid wheat (Triticum aestivum)-Lophopyrum genetic lines and tagging of the alien chromatin by PCR markers. Theor Appl Genet. 108(5):808–813.
   PubMed Web of Science ®Google Scholar
• Soliman KM, Bernardin JE, Qualset CO. 1980. Effects of an Agropyron chromosome on endosperm proteins in common wheat Triticum aestivum L.). Biochem Genet. 18(5-6):465–482.
   PubMed Web of Science ®Google Scholar
• Tanaka H, Nabeuchi C, Kurogaki M, Garg M, Saito M, Ishikawa G, Nakamura T, Tsujimoto H. 2017. A novel compensating wheat–Thinopyrum elongatum Robertsonian translocation line with a positive effect on flour quality. Breed. Sci. 67(5):509–517.
   PubMed Web of Science ®Google Scholar
• Tomaselli V, Adamo M, Veronico G, Sciandrello S, Tarantino C, Dimopoulos P, Medagli P, Nagendra H, Blonda P. 2017. Definition and application of expert knowledge on vegetation pattern, phenology and seasonality for habitat mapping, as exemplified in a Mediterranean coastal site. Plant Biosystems. 151(5):887–899.
   Web of Science ®Google Scholar
• Tomaselli V, Pietro R, Sciandrello S. 2011. Distribution, structure and ecology of coastal wetlands plant communities in southern Apulia (Italy). Biologia. 66(6):1027–1043.
   Web of Science ®Google Scholar
• Tomaselli V, Sciandrello S. 2017. Contribution to the knowledge of the coastal vegetation of the SIC IT9110005 “Zone Umide della Capitanata” (Apulia, Italy), plant biosystems. Int J Dealing Asp Plant Biol. 151(4):673–694.
   Web of Science ®Google Scholar
• Tomaselli V, Tenerelli P, Sciandrello S. 2012. Mapping and quantifying habitat fragmentation in small coastal areas: a case study of three protected wetlands in Apulia (Italy). Environ Monit Assess. 184(2):693–713.
   PubMed Web of Science ®Google Scholar
• Tuleen NA, Hart GE. 1988. Isolation and characterization of wheat–Elytrigia elongata chromosome 3E and 5E addition and substitution lines. Genome. 30(4):519–524.
   Web of Science ®Google Scholar
• USDA Soil Conservation Service. 1972. “Hydrology”, Section 4, Chapters 4–10, Soil Conservation Service National Engineering Handbook. U.S. Government Printing Office, Washington, DC.
   Google Scholar
• Valdemoro HI, Sanchez-Arcilla A, Jiménez JA. 2007. Coastal dynamics and wetlands stability. Ebro Delta Case Hydrobiol. 577(1):17–29.
   Google Scholar
• Van der Maarel E. 1979. Transformation of cover-abundance values in phytosociology and its effects on community similarità. Vegetatio. 39:97–114.
   Google Scholar
• Van Der Maarel E. 2003. Some remarks on the functions of European coastal ecosystems. Phytocoenologia. 33(2-3):187–202.
   Web of Science ®Google Scholar
• Wang JR, Wang L, Gulden S, Rocheleau H, Balcerzak M, Hattori J, Cao W, Han F, Zheng Y-L, Fedak G, et al. 2010. RNA profiling of fusarium head blight-resistant wheat addition lines containing the Thinopyrum elongatum chromosome 7E. Can J Plant Pathol. 32(2):188–214.
   Web of Science ®Google Scholar
• Wang JR, Yan ZH, Wei YM, Zheng YL. 2006. Characterization of high‐molecular‐weight glutenin subunit genes from Elytrigia elongata. Plant Breed. 125(1):89–95.
   Web of Science ®Google Scholar
• Wang RRC. 2011. Agropyron and Psathyrostachys. In: Wild crop relatives: genomic and breeding resources. Berlin (Germany): Springer; p. 77–108. https://doi.org/https://doi.org/10.1007/978-3-642-14228-4_2.
   Google Scholar
• Whitham TG, Bailey JK, Schweitzer JA, Shuster SM, Bangert RK, LeRoy CJ, Lonsdorf EV, Allan GJ, DiFazio SP, Potts BM, et al. 2006. A framework for community and ecosystem genetics: from genes to ecosystems. Nat Rev Genet. 7(7):510–523. https://doi.org/http://dx.doi.org/10.1038/nrg1877.
   PubMed Web of Science ®Google Scholar
• Whitlock R, Grime JP, Booth R, Burke T. 2007. The role of genotypic diversity in determining grassland community structure under constant environmental conditions. J Ecol. 95(5):895–907.
   Web of Science ®Google Scholar
• Zhang X, DeHaan LR, Higgins L, Markowski TW, Wyse DL, Anderson JA. 2014. New insights into high-molecular-weight glutenin subunits and sub-genomes of the perennial crop Thinopyrum intermedium (Triticeae). J Cereal Sci. 59(2):203–210.
   Web of Science ®Google Scholar